RNA–Protein interactions for RNA: ENST00000615043.1

PCDH15-228, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-228ENST00000615043 CHIC1Q5VXU3 224 aa29.73■■■□□ 2.35
PCDH15-228ENST00000615043 AEBP2Q6ZN18 517 aaPredicted RBP29.54■■■□□ 2.32
PCDH15-228ENST00000615043 PHF23Q9BUL5 403 aaPredicted RBP26.26■■□□□ 1.79
PCDH15-228ENST00000615043 SENP3Q9H4L4 574 aaPredicted RBP24.9■■□□□ 1.58
PCDH15-228ENST00000615043 PLPPR3Q6T4P5 718 aa24.54■■□□□ 1.52
PCDH15-228ENST00000615043 FOXD1Q16676 465 aa23.02■■□□□ 1.28
PCDH15-228ENST00000615043 ADRA2BP18089 450 aa22.99■■□□□ 1.27
PCDH15-228ENST00000615043 PPP6R1Q9UPN7 881 aa22.87■■□□□ 1.25
PCDH15-228ENST00000615043 KCNA4P22459 653 aa22.29■■□□□ 1.16
PCDH15-228ENST00000615043 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
PCDH15-228ENST00000615043 PIAS4Q8N2W9 510 aaPredicted RBP21.93■■□□□ 1.1
PCDH15-228ENST00000615043 EHMT2Q96KQ7 1210 aa21.85■■□□□ 1.09
PCDH15-228ENST00000615043 PPP4R3CPQ6ZMV5 832 aa21.76■■□□□ 1.07
PCDH15-228ENST00000615043 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
PCDH15-228ENST00000615043 SLC4A1APQ9BWU0 796 aaKnown RBP21.39■■□□□ 1.01
PCDH15-228ENST00000615043 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
PCDH15-228ENST00000615043 NPM3O75607 178 aaKnown RBP21.13■□□□□ 0.97
PCDH15-228ENST00000615043 CNKSR2Q8WXI2 1034 aa20.93■□□□□ 0.94
PCDH15-228ENST00000615043 SCAF1Q9H7N4 1312 aaKnown RBP20.93■□□□□ 0.94
PCDH15-228ENST00000615043 MSH5O43196 834 aa20.84■□□□□ 0.93
PCDH15-228ENST00000615043 ZBTB22O15209 634 aa20.53■□□□□ 0.88
PCDH15-228ENST00000615043 MAPK8IP2Q13387 824 aaPredicted RBP20.53■□□□□ 0.88
PCDH15-228ENST00000615043 DNAJC5BQ9UF47 199 aa20.34■□□□□ 0.85
PCDH15-228ENST00000615043 RNF216Q9NWF9 866 aaPredicted RBP20.29■□□□□ 0.84
PCDH15-228ENST00000615043 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
PCDH15-228ENST00000615043 DMRT2Q9Y5R5 561 aa20.02■□□□□ 0.8
PCDH15-228ENST00000615043 HOXD11P31277 338 aaPredicted RBP19.97■□□□□ 0.79
PCDH15-228ENST00000615043 SLC4A2P04920 1241 aa19.74■□□□□ 0.75
PCDH15-228ENST00000615043 CCDC180Q9P1Z9 1646 aa19.53■□□□□ 0.72
PCDH15-228ENST00000615043 MYCNP04198 464 aaPredicted RBP19.5■□□□□ 0.71
PCDH15-228ENST00000615043 ATXN8OSP0DMR3 200 aa19.44■□□□□ 0.7
PCDH15-228ENST00000615043 DCAF8L1A6NGE4 600 aa19.15■□□□□ 0.66
PCDH15-228ENST00000615043 FKBP8Q14318 412 aa19.08■□□□□ 0.64
PCDH15-228ENST00000615043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.05■□□□□ 0.64
PCDH15-228ENST00000615043 RTN4Q9NQC3 1192 aaKnown RBP18.98■□□□□ 0.63
PCDH15-228ENST00000615043 AMER1Q5JTC6 1135 aaPredicted RBP18.97■□□□□ 0.63
PCDH15-228ENST00000615043 ATF5Q9Y2D1 282 aaPredicted RBP18.93■□□□□ 0.62
PCDH15-228ENST00000615043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
PCDH15-228ENST00000615043 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
PCDH15-228ENST00000615043 SAMD1Q6SPF0 538 aaPredicted RBP18.87■□□□□ 0.61
PCDH15-228ENST00000615043 U3KPZ7 1027 aaPredicted RBP18.84■□□□□ 0.61
PCDH15-228ENST00000615043 ABCC9O60706 1549 aa18.69■□□□□ 0.58
PCDH15-228ENST00000615043 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
PCDH15-228ENST00000615043 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
PCDH15-228ENST00000615043 ZNF219Q9P2Y4 722 aaPredicted RBP18.51■□□□□ 0.55
PCDH15-228ENST00000615043 APLP2Q06481 763 aa18.48■□□□□ 0.55
PCDH15-228ENST00000615043 DCAF8L2P0C7V8 631 aa18.34■□□□□ 0.53
PCDH15-228ENST00000615043 DCAF1Q9Y4B6 1507 aa18.33■□□□□ 0.53
PCDH15-228ENST00000615043 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
PCDH15-228ENST00000615043 NACADO15069 1562 aa18.22■□□□□ 0.51
PCDH15-228ENST00000615043 SPDYE4A6NLX3 237 aa18.18■□□□□ 0.5
PCDH15-228ENST00000615043 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
PCDH15-228ENST00000615043 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
PCDH15-228ENST00000615043 FBXO3Q9UK99 471 aa18.13■□□□□ 0.49
PCDH15-228ENST00000615043 TRHP20396 242 aaPredicted RBP18.09■□□□□ 0.49
PCDH15-228ENST00000615043 FBLN2P98095 1184 aa18.06■□□□□ 0.48
PCDH15-228ENST00000615043 SPINK5Q9NQ38 1064 aaPredicted RBP18.06■□□□□ 0.48
PCDH15-228ENST00000615043 POLA2Q14181 598 aa17.99■□□□□ 0.47
PCDH15-228ENST00000615043 PROM2Q8N271 834 aa17.99■□□□□ 0.47
PCDH15-228ENST00000615043 RNF39Q9H2S5 420 aa17.95■□□□□ 0.46
PCDH15-228ENST00000615043 CAPN15O75808 1086 aa17.94■□□□□ 0.46
PCDH15-228ENST00000615043 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
PCDH15-228ENST00000615043 VASPP50552 380 aaPredicted RBP17.87■□□□□ 0.45
PCDH15-228ENST00000615043 SHROOM4Q9ULL8 1493 aa17.85■□□□□ 0.45
PCDH15-228ENST00000615043 C1QBPQ07021 282 aaKnown RBP17.79■□□□□ 0.44
PCDH15-228ENST00000615043 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
PCDH15-228ENST00000615043 ZBTB12Q9Y330 459 aaPredicted RBP17.73■□□□□ 0.43
PCDH15-228ENST00000615043 ABCB7O75027 752 aa17.7■□□□□ 0.42
PCDH15-228ENST00000615043 IFNLR1Q8IU57 520 aaPredicted RBP17.7■□□□□ 0.42
PCDH15-228ENST00000615043 BICRAQ9NZM4 1560 aa17.58■□□□□ 0.41
PCDH15-228ENST00000615043 PLCB2Q00722 1185 aa17.51■□□□□ 0.39
PCDH15-228ENST00000615043 PABPN1Q86U42 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
PCDH15-228ENST00000615043 PKD2Q13563 968 aa17.46■□□□□ 0.39
PCDH15-228ENST00000615043 ZNF692Q9BU19 519 aaPredicted RBP17.43■□□□□ 0.38
PCDH15-228ENST00000615043 DSG3P32926 999 aa17.41■□□□□ 0.38
PCDH15-228ENST00000615043 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
PCDH15-228ENST00000615043 KLHL34Q8N239 644 aa17.37■□□□□ 0.37
PCDH15-228ENST00000615043 SPDYE2BA6NHP3 402 aa17.34■□□□□ 0.37
PCDH15-228ENST00000615043 SPDYE6P0CI01 402 aa17.34■□□□□ 0.37
PCDH15-228ENST00000615043 SPDYE2Q495Y8 402 aa17.34■□□□□ 0.37
PCDH15-228ENST00000615043 SPOCK2Q92563 424 aa17.34■□□□□ 0.37
PCDH15-228ENST00000615043 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
PCDH15-228ENST00000615043 OSCARQ8IYS5 282 aa17.33■□□□□ 0.36
PCDH15-228ENST00000615043 SSUH2Q9Y2M2 353 aa17.3■□□□□ 0.36
PCDH15-228ENST00000615043 HAP1P54257 671 aaPredicted RBP17.28■□□□□ 0.36
PCDH15-228ENST00000615043 PLCD3Q8N3E9 789 aa17.24■□□□□ 0.35
PCDH15-228ENST00000615043 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
PCDH15-228ENST00000615043 ECM2O94769 699 aaPredicted RBP17.2■□□□□ 0.34
PCDH15-228ENST00000615043 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
PCDH15-228ENST00000615043 MIER1Q8N108 512 aa17.15■□□□□ 0.34
PCDH15-228ENST00000615043 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
PCDH15-228ENST00000615043 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
PCDH15-228ENST00000615043 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
PCDH15-228ENST00000615043 BBXQ8WY36 941 aaPredicted RBP17.06■□□□□ 0.32
PCDH15-228ENST00000615043 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.06■□□□□ 0.32
PCDH15-228ENST00000615043 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
PCDH15-228ENST00000615043 VSIG10Q8N0Z9 540 aa17.02■□□□□ 0.32
PCDH15-228ENST00000615043 NPM1P06748 294 aaKnown RBP eCLIP17.01■□□□□ 0.31
PCDH15-228ENST00000615043 RGL2O15211 777 aa17■□□□□ 0.31
PCDH15-228ENST00000615043 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms