RNA–Protein interactions for RNA: ENST00000612642.4

AMD1-207, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 1 (best)

Gene AMD1, Length 4,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-207ENST00000612642 GRIN2BQ13224 1484 aa9.54□□□□□ -0.88
AMD1-207ENST00000612642 BECN1Q14457 450 aa9.54□□□□□ -0.88
AMD1-207ENST00000612642 ANP32BQ92688 251 aaKnown RBP9.54□□□□□ -0.88
AMD1-207ENST00000612642 UACAQ9BZF9 1416 aa9.54□□□□□ -0.88
AMD1-207ENST00000612642 DNMBPQ6XZF7 1577 aa9.54□□□□□ -0.88
AMD1-207ENST00000612642 MAP3K1Q13233 1512 aa9.53□□□□□ -0.88
AMD1-207ENST00000612642 STAC3Q96MF2 364 aa9.53□□□□□ -0.88
AMD1-207ENST00000612642 SALL2Q9Y467 1007 aaPredicted RBP9.53□□□□□ -0.88
AMD1-207ENST00000612642 ARAP1Q96P48 1450 aa9.52□□□□□ -0.89
AMD1-207ENST00000612642 HSP90AA1P07900 732 aaKnown RBP9.52□□□□□ -0.89
AMD1-207ENST00000612642 RAD54L2Q9Y4B4 1467 aa9.52□□□□□ -0.89
AMD1-207ENST00000612642 EHBP1L1Q8N3D4 1523 aa9.52□□□□□ -0.89
AMD1-207ENST00000612642 PDE3BQ13370 1112 aa9.51□□□□□ -0.89
AMD1-207ENST00000612642 IFT140Q96RY7 1462 aa9.51□□□□□ -0.89
AMD1-207ENST00000612642 PTPRGP23470 1445 aa9.5□□□□□ -0.89
AMD1-207ENST00000612642 MIA2Q96PC5 1412 aa9.5□□□□□ -0.89
AMD1-207ENST00000612642 AQRO60306 1485 aaKnown RBP eCLIP9.5□□□□□ -0.891e-8■■■■■ 29.9
AMD1-207ENST00000612642 TOPBP1Q92547 1522 aa9.5□□□□□ -0.89
AMD1-207ENST00000612642 L3MBTL2Q969R5 705 aa9.5□□□□□ -0.89
AMD1-207ENST00000612642 PPM1GO15355 546 aaPredicted RBP9.5□□□□□ -0.89
AMD1-207ENST00000612642 MRC2Q9UBG0 1479 aa9.5□□□□□ -0.89
AMD1-207ENST00000612642 MAPK8IP3Q9UPT6 1336 aa9.5□□□□□ -0.89
AMD1-207ENST00000612642 HAP1P54257 671 aaPredicted RBP9.49□□□□□ -0.89
AMD1-207ENST00000612642 TIAM1Q13009 1591 aa9.48□□□□□ -0.89
AMD1-207ENST00000612642 NCOA2Q15596 1464 aa9.48□□□□□ -0.89
AMD1-207ENST00000612642 CUL7Q14999 1698 aa9.48□□□□□ -0.89
AMD1-207ENST00000612642 ABCA10Q8WWZ4 1543 aa9.48□□□□□ -0.89
AMD1-207ENST00000612642 KIF15Q9NS87 1388 aa9.48□□□□□ -0.89
AMD1-207ENST00000612642 LAMC3Q9Y6N6 1575 aa9.48□□□□□ -0.89
AMD1-207ENST00000612642 CC2D2AQ9P2K1 1620 aa9.47□□□□□ -0.89
AMD1-207ENST00000612642 CFAP44Q96MT7 982 aa9.47□□□□□ -0.89
AMD1-207ENST00000612642 POGKQ9P215 609 aa9.47□□□□□ -0.89
AMD1-207ENST00000612642 BIVM-ERCC5R4GMW8 1640 aa9.47□□□□□ -0.89
AMD1-207ENST00000612642 CCDC144AA2RUR9 1427 aa9.47□□□□□ -0.89
AMD1-207ENST00000612642 IRX6P78412 446 aaPredicted RBP9.47□□□□□ -0.89
AMD1-207ENST00000612642 SPAG9O60271 1321 aaKnown RBP9.47□□□□□ -0.89
AMD1-207ENST00000612642 HECW1Q76N89 1606 aa9.47□□□□□ -0.89
AMD1-207ENST00000612642 POLA1P09884 1462 aaPredicted RBP9.46□□□□□ -0.9
AMD1-207ENST00000612642 NLRP13Q86W25 1043 aa9.46□□□□□ -0.9
AMD1-207ENST00000612642 FTSJ3Q8IY81 847 aaKnown RBP9.44□□□□□ -0.9
AMD1-207ENST00000612642 NGEFQ8N5V2 710 aa9.44□□□□□ -0.9
AMD1-207ENST00000612642 CALD1Q05682 793 aaKnown RBP9.43□□□□□ -0.9
AMD1-207ENST00000612642 CC2D1BQ5T0F9 858 aaKnown RBP9.43□□□□□ -0.9
AMD1-207ENST00000612642 CASC1Q6TDU7 716 aa9.43□□□□□ -0.9
AMD1-207ENST00000612642 MORC1Q86VD1 984 aa9.43□□□□□ -0.9
AMD1-207ENST00000612642 PLEKHH2Q8IVE3 1493 aa9.42□□□□□ -0.9
AMD1-207ENST00000612642 HFM1A2PYH4 1435 aa9.42□□□□□ -0.9
AMD1-207ENST00000612642 MYBBP1AQ9BQG0 1328 aaKnown RBP9.42□□□□□ -0.9
AMD1-207ENST00000612642 HNRNPMP52272 730 aaKnown RBP eCLIP9.42□□□□□ -0.9
AMD1-207ENST00000612642 HDGFL2Q7Z4V5 671 aaPredicted RBP9.41□□□□□ -0.9
AMD1-207ENST00000612642 SUPT6HQ7KZ85 1726 aaKnown RBP9.41□□□□□ -0.9
AMD1-207ENST00000612642 GOLGA6L22H0YM25 854 aa9.41□□□□□ -0.9
AMD1-207ENST00000612642 FOXD1Q16676 465 aa9.41□□□□□ -0.9
AMD1-207ENST00000612642 SYNJ2O15056 1496 aa9.4□□□□□ -0.9
AMD1-207ENST00000612642 TCERG1O14776 1098 aaKnown RBP9.4□□□□□ -0.9
AMD1-207ENST00000612642 ZBED9Q6R2W3 1325 aa9.4□□□□□ -0.91
AMD1-207ENST00000612642 USP47Q96K76 1375 aa9.4□□□□□ -0.91
AMD1-207ENST00000612642 CHMP4AQ9BY43 222 aa9.39□□□□□ -0.91
AMD1-207ENST00000612642 RCAN3Q9UKA8 241 aa9.39□□□□□ -0.91
AMD1-207ENST00000612642 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
AMD1-207ENST00000612642 ROCK1Q13464 1354 aa9.39□□□□□ -0.91
AMD1-207ENST00000612642 ANKRD50Q9ULJ7 1429 aa9.38□□□□□ -0.91
AMD1-207ENST00000612642 KIAA0586Q9BVV6 1533 aa9.38□□□□□ -0.91
AMD1-207ENST00000612642 IPO8O15397 1037 aaKnown RBP9.38□□□□□ -0.91
AMD1-207ENST00000612642 PRKRIP1Q9H875 184 aaPredicted RBP9.38□□□□□ -0.91
AMD1-207ENST00000612642 UNC13AQ9UPW8 1703 aa9.38□□□□□ -0.91
AMD1-207ENST00000612642 TROQ12816 1431 aaPredicted RBP9.38□□□□□ -0.91
AMD1-207ENST00000612642 KIF3BO15066 747 aa9.38□□□□□ -0.91
AMD1-207ENST00000612642 CNTLNQ9NXG0 1405 aa9.37□□□□□ -0.91
AMD1-207ENST00000612642 PRDM2Q13029 1718 aa9.37□□□□□ -0.91
AMD1-207ENST00000612642 TERF2IPQ9NYB0 399 aa9.37□□□□□ -0.91
AMD1-207ENST00000612642 SRPK2P78362 688 aaKnown RBP9.36□□□□□ -0.91
AMD1-207ENST00000612642 CCDC7Q96M83 1385 aa9.36□□□□□ -0.91
AMD1-207ENST00000612642 THOC2Q8NI27 1593 aaKnown RBP9.36□□□□□ -0.91
AMD1-207ENST00000612642 GGT6Q6P531 493 aa9.35□□□□□ -0.91
AMD1-207ENST00000612642 IQGAP2Q13576 1575 aa9.35□□□□□ -0.91
AMD1-207ENST00000612642 NBR1Q14596 966 aa9.35□□□□□ -0.91
AMD1-207ENST00000612642 WASHC2AQ641Q2 1341 aa9.35□□□□□ -0.91
AMD1-207ENST00000612642 WASHC2CQ9Y4E1 1318 aa9.35□□□□□ -0.91
AMD1-207ENST00000612642 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
AMD1-207ENST00000612642 B4GALNT3Q6L9W6 998 aa9.34□□□□□ -0.91
AMD1-207ENST00000612642 NCLP19338 710 aaKnown RBP9.34□□□□□ -0.91
AMD1-207ENST00000612642 BCL11AQ9H165 835 aa9.34□□□□□ -0.91
AMD1-207ENST00000612642 PMFBP1Q8TBY8 1022 aa9.34□□□□□ -0.91
AMD1-207ENST00000612642 U2SURPO15042 1029 aaKnown RBP9.33□□□□□ -0.92
AMD1-207ENST00000612642 NESP48681 1621 aa9.33□□□□□ -0.92
AMD1-207ENST00000612642 VGFO15240 615 aaPredicted RBP9.33□□□□□ -0.92
AMD1-207ENST00000612642 RBM19Q9Y4C8 960 aaKnown RBP9.33□□□□□ -0.92
AMD1-207ENST00000612642 KIAA1107Q9UPP5 1409 aa9.33□□□□□ -0.92
AMD1-207ENST00000612642 ST20-MTHFSA0A0A6YYL1 179 aa9.33□□□□□ -0.92
AMD1-207ENST00000612642 RWDD1Q9H446 243 aaPredicted RBP9.33□□□□□ -0.92
AMD1-207ENST00000612642 PTMSP20962 102 aa9.32□□□□□ -0.92
AMD1-207ENST00000612642 LMOD3Q0VAK6 560 aa9.32□□□□□ -0.92
AMD1-207ENST00000612642 PCF11O94913 1555 aaKnown RBP9.32□□□□□ -0.92
AMD1-207ENST00000612642 FRAT1Q92837 279 aaPredicted RBP9.32□□□□□ -0.92
AMD1-207ENST00000612642 EPRSP07814 1512 aaKnown RBP9.32□□□□□ -0.92
AMD1-207ENST00000612642 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
AMD1-207ENST00000612642 MAGI1Q96QZ7 1491 aaPredicted RBP9.31□□□□□ -0.92
AMD1-207ENST00000612642 AKNAQ7Z591 1439 aa9.31□□□□□ -0.92
AMD1-207ENST00000612642 BRD4O60885 1362 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms