RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 MYOM3Q5VTT5 1437 aa18.93■□□□□ 0.62
HOXA3-207ENST00000612286 CC2D1BQ5T0F9 858 aaKnown RBP18.91■□□□□ 0.62
HOXA3-207ENST00000612286 CARD11Q9BXL7 1154 aa18.91■□□□□ 0.62
HOXA3-207ENST00000612286 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
HOXA3-207ENST00000612286 PTPN23Q9H3S7 1636 aa18.91■□□□□ 0.62
HOXA3-207ENST00000612286 CDCA7LQ96GN5 454 aa18.9■□□□□ 0.62
HOXA3-207ENST00000612286 PKD2Q13563 968 aa18.9■□□□□ 0.62
HOXA3-207ENST00000612286 FYCO1Q9BQS8 1478 aa18.89■□□□□ 0.61
HOXA3-207ENST00000612286 ARXQ96QS3 562 aa18.87■□□□□ 0.61
HOXA3-207ENST00000612286 ST20-MTHFSA0A0A6YYL1 179 aa18.86■□□□□ 0.61
HOXA3-207ENST00000612286 DCAF11Q8TEB1 546 aa18.85■□□□□ 0.61
HOXA3-207ENST00000612286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.61
HOXA3-207ENST00000612286 KDM6BO15054 1643 aa18.84■□□□□ 0.61
HOXA3-207ENST00000612286 ERICH6BQ5W0A0 696 aa18.83■□□□□ 0.6
HOXA3-207ENST00000612286 EIF5BO60841 1220 aaKnown RBP18.82■□□□□ 0.6
HOXA3-207ENST00000612286 POLA1P09884 1462 aaPredicted RBP18.82■□□□□ 0.6
HOXA3-207ENST00000612286 USP47Q96K76 1375 aa18.81■□□□□ 0.6
HOXA3-207ENST00000612286 CFDP1Q9UEE9 299 aaPredicted RBP18.81■□□□□ 0.6
HOXA3-207ENST00000612286 CDK13Q14004 1512 aaKnown RBP18.8■□□□□ 0.6
HOXA3-207ENST00000612286 PDE4AP27815 886 aa18.8■□□□□ 0.6
HOXA3-207ENST00000612286 DAXXQ9UER7 740 aaPredicted RBP18.8■□□□□ 0.6
HOXA3-207ENST00000612286 RCAN3Q9UKA8 241 aa18.8■□□□□ 0.6
HOXA3-207ENST00000612286 NCOA1Q15788 1441 aa18.8■□□□□ 0.6
HOXA3-207ENST00000612286 RGS3P49796 1198 aa18.78■□□□□ 0.6
HOXA3-207ENST00000612286 PNISRQ8TF01 805 aaKnown RBP18.78■□□□□ 0.6
HOXA3-207ENST00000612286 CFAP43Q8NDM7 1665 aa18.77■□□□□ 0.6
HOXA3-207ENST00000612286 MYT1LQ9UL68 1186 aa18.77■□□□□ 0.6
HOXA3-207ENST00000612286 KDM5BQ9UGL1 1544 aa18.77■□□□□ 0.59
HOXA3-207ENST00000612286 DENND4BO75064 1496 aaPredicted RBP18.76■□□□□ 0.59
HOXA3-207ENST00000612286 RRP1P56182 461 aaKnown RBP18.76■□□□□ 0.59
HOXA3-207ENST00000612286 HMGXB3Q12766 1538 aa18.76■□□□□ 0.59
HOXA3-207ENST00000612286 BRPF3Q9ULD4 1205 aa18.75■□□□□ 0.59
HOXA3-207ENST00000612286 PRKCSHP14314 528 aaPredicted RBP18.74■□□□□ 0.59
HOXA3-207ENST00000612286 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
HOXA3-207ENST00000612286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.73■□□□□ 0.59
HOXA3-207ENST00000612286 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
HOXA3-207ENST00000612286 CRBNQ96SW2 442 aa18.72■□□□□ 0.59
HOXA3-207ENST00000612286 MAGI3Q5TCQ9 1506 aa18.72■□□□□ 0.59
HOXA3-207ENST00000612286 C20orf194Q5TEA3 1177 aa18.72■□□□□ 0.59
HOXA3-207ENST00000612286 ANKRD30BQ9BXX2 1392 aa18.71■□□□□ 0.59
HOXA3-207ENST00000612286 TOPBP1Q92547 1522 aa18.71■□□□□ 0.59
HOXA3-207ENST00000612286 SMG6Q86US8 1419 aaKnown RBP18.69■□□□□ 0.58
HOXA3-207ENST00000612286 SENP3Q9H4L4 574 aaPredicted RBP18.69■□□□□ 0.58
HOXA3-207ENST00000612286 NBPF1Q3BBV0 1214 aa18.67■□□□□ 0.58
HOXA3-207ENST00000612286 NUP155O75694 1391 aa18.65■□□□□ 0.58
HOXA3-207ENST00000612286 DHX29Q7Z478 1369 aaKnown RBP18.65■□□□□ 0.58
HOXA3-207ENST00000612286 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
HOXA3-207ENST00000612286 HNRNPMP52272 730 aaKnown RBP eCLIP18.63■□□□□ 0.57
HOXA3-207ENST00000612286 CCDC146Q8IYE0 955 aa18.62■□□□□ 0.57
HOXA3-207ENST00000612286 EFCAB5A4FU69 1503 aa18.62■□□□□ 0.57
HOXA3-207ENST00000612286 SUPT6HQ7KZ85 1726 aaKnown RBP18.61■□□□□ 0.57
HOXA3-207ENST00000612286 BACH2Q9BYV9 841 aa18.61■□□□□ 0.57
HOXA3-207ENST00000612286 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
HOXA3-207ENST00000612286 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
HOXA3-207ENST00000612286 TCERG1O14776 1098 aaKnown RBP18.59■□□□□ 0.57
HOXA3-207ENST00000612286 RPRD2Q5VT52 1461 aaKnown RBP18.58■□□□□ 0.57
HOXA3-207ENST00000612286 ROCK2O75116 1388 aaKnown RBP18.58■□□□□ 0.57
HOXA3-207ENST00000612286 MYBBP1AQ9BQG0 1328 aaKnown RBP18.58■□□□□ 0.56
HOXA3-207ENST00000612286 THOC2Q8NI27 1593 aaKnown RBP18.58■□□□□ 0.56
HOXA3-207ENST00000612286 NEUROD2Q15784 382 aa18.58■□□□□ 0.56
HOXA3-207ENST00000612286 SPRYD3Q8NCJ5 442 aa18.58■□□□□ 0.56
HOXA3-207ENST00000612286 ABCC5O15440 1437 aa18.57■□□□□ 0.56
HOXA3-207ENST00000612286 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
HOXA3-207ENST00000612286 PANK3Q9H999 370 aa18.57■□□□□ 0.56
HOXA3-207ENST00000612286 DAPK1P53355 1430 aa18.57■□□□□ 0.56
HOXA3-207ENST00000612286 EPRSP07814 1512 aaKnown RBP18.56■□□□□ 0.56
HOXA3-207ENST00000612286 EHBP1L1Q8N3D4 1523 aa18.56■□□□□ 0.56
HOXA3-207ENST00000612286 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
HOXA3-207ENST00000612286 TSPY10P0CW01 314 aa18.56■□□□□ 0.56
HOXA3-207ENST00000612286 UGGT2Q9NYU1 1516 aa18.55■□□□□ 0.56
HOXA3-207ENST00000612286 NFKBIBQ15653 356 aa18.54■□□□□ 0.56
HOXA3-207ENST00000612286 LRRIQ1Q96JM4 1722 aa18.54■□□□□ 0.56
HOXA3-207ENST00000612286 FRAT1Q92837 279 aaPredicted RBP18.54■□□□□ 0.56
HOXA3-207ENST00000612286 SPATA31E1Q6ZUB1 1445 aa18.54■□□□□ 0.56
HOXA3-207ENST00000612286 TNNT2P45379 298 aaPredicted RBP18.53■□□□□ 0.56
HOXA3-207ENST00000612286 KIF15Q9NS87 1388 aa18.53■□□□□ 0.56
HOXA3-207ENST00000612286 NLRP13Q86W25 1043 aa18.53■□□□□ 0.56
HOXA3-207ENST00000612286 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
HOXA3-207ENST00000612286 TEX14Q8IWB6 1497 aa18.53■□□□□ 0.56
HOXA3-207ENST00000612286 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.56
HOXA3-207ENST00000612286 ADAMTS8Q9UP79 889 aa18.52■□□□□ 0.56
HOXA3-207ENST00000612286 PRDM2Q13029 1718 aa18.52■□□□□ 0.56
HOXA3-207ENST00000612286 FRAT2O75474 233 aaPredicted RBP18.51■□□□□ 0.55
HOXA3-207ENST00000612286 CC2D2AQ9P2K1 1620 aa18.5■□□□□ 0.55
HOXA3-207ENST00000612286 KTN1Q86UP2 1357 aaKnown RBP18.5■□□□□ 0.55
HOXA3-207ENST00000612286 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
HOXA3-207ENST00000612286 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
HOXA3-207ENST00000612286 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
HOXA3-207ENST00000612286 CANXP27824 592 aaKnown RBP18.48■□□□□ 0.55
HOXA3-207ENST00000612286 RNF123Q5XPI4 1314 aa18.48■□□□□ 0.55
HOXA3-207ENST00000612286 PPM1GO15355 546 aaPredicted RBP18.48■□□□□ 0.55
HOXA3-207ENST00000612286 RALBP1Q15311 655 aa18.48■□□□□ 0.55
HOXA3-207ENST00000612286 CTTNBP2Q8WZ74 1663 aa18.47■□□□□ 0.55
HOXA3-207ENST00000612286 GSE1Q14687 1217 aa18.46■□□□□ 0.55
HOXA3-207ENST00000612286 BCORL1Q5H9F3 1711 aa18.45■□□□□ 0.54
HOXA3-207ENST00000612286 PLEKHD1A6NEE1 506 aa18.44■□□□□ 0.54
HOXA3-207ENST00000612286 BCL2L13Q9BXK5 485 aa18.43■□□□□ 0.54
HOXA3-207ENST00000612286 BCAR3O75815 825 aa18.42■□□□□ 0.54
HOXA3-207ENST00000612286 KIAA1107Q9UPP5 1409 aa18.41■□□□□ 0.54
HOXA3-207ENST00000612286 ANKRD50Q9ULJ7 1429 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms