RNA–Protein interactions for RNA: ENST00000611835.4

GTF2IRD2B-204, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-204ENST00000611835 LAMC3Q9Y6N6 1575 aa8.55□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 KCNA4P22459 653 aa8.55□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.55□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 NAIPQ13075 1403 aa8.54□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 NBPF8Q3BBV2 869 aa8.54□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 PCF11O94913 1555 aaKnown RBP8.54□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 FGD5Q6ZNL6 1462 aa8.53□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 CADPSQ9ULU8 1353 aa8.52□□□□□ -1.04
GTF2IRD2B-204ENST00000611835 CASKIN1Q8WXD9 1431 aa8.52□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.52□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 EXOC6Q8TAG9 804 aa8.51□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 KDM2AQ9Y2K7 1162 aa8.51□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 FYCO1Q9BQS8 1478 aa8.5□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 MYOM3Q5VTT5 1437 aa8.5□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 PDE4AP27815 886 aa8.5□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 ZNF777Q9ULD5 760 aaPredicted RBP8.5□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 NCOA2Q15596 1464 aa8.49□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 RAD54L2Q9Y4B4 1467 aa8.49□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 RCAN3Q9UKA8 241 aa8.48□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 NCOA1Q15788 1441 aa8.48□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 SMG6Q86US8 1419 aaKnown RBP8.48□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 TCERG1O14776 1098 aaKnown RBP8.48□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 PPM1GO15355 546 aaPredicted RBP8.47□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 SLC4A3P48751 1232 aa8.47□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 PTPN23Q9H3S7 1636 aa8.47□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 PLIN1O60240 522 aa8.47□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 SKAP1Q86WV1 359 aa8.47□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 CARD11Q9BXL7 1154 aa8.47□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 TDRD9Q8NDG6 1382 aaKnown RBP8.47□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 RRP1P56182 461 aaKnown RBP8.46□□□□□ -1.05
GTF2IRD2B-204ENST00000611835 PNISRQ8TF01 805 aaKnown RBP8.46□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 PDIA4P13667 645 aaKnown RBP8.45□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 ZNF644Q9H582 1327 aaPredicted RBP8.44□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 BRPF3Q9ULD4 1205 aa8.44□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 USP47Q96K76 1375 aa8.44□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 PKD2Q13563 968 aa8.43□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 CDCA7LQ96GN5 454 aa8.43□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 BACH2Q9BYV9 841 aa8.43□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 USP35Q9P2H5 1018 aa8.43□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 DDRGK1Q96HY6 314 aa8.42□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 CFAP43Q8NDM7 1665 aa8.42□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 FANCD2Q9BXW9 1451 aa8.42□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 ST20-MTHFSA0A0A6YYL1 179 aa8.42□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 CC2D1BQ5T0F9 858 aaKnown RBP8.41□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 DNMBPQ6XZF7 1577 aa8.41□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 ANKRD30BQ9BXX2 1392 aa8.4□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 GSE1Q14687 1217 aa8.4□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 EFCAB5A4FU69 1503 aa8.4□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 KDM5BQ9UGL1 1544 aa8.4□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 PDS5BQ9NTI5 1447 aa8.4□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 RNF123Q5XPI4 1314 aa8.4□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 RGS3P49796 1198 aa8.4□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 DCAF11Q8TEB1 546 aa8.4□□□□□ -1.06
GTF2IRD2B-204ENST00000611835 CRBNQ96SW2 442 aa8.4□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 CFDP1Q9UEE9 299 aaPredicted RBP8.4□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 MS4A1P11836 297 aa8.39□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 NFKBIBQ15653 356 aa8.39□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 RGL3Q3MIN7 710 aa8.39□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 MYBBP1AQ9BQG0 1328 aaKnown RBP8.39□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 TPRNQ4KMQ1 711 aa8.38□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 RALBP1Q15311 655 aa8.38□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 DHX29Q7Z478 1369 aaKnown RBP8.38□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 NESP48681 1621 aa8.38□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 KIF15Q9NS87 1388 aa8.37□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 KIF21AQ7Z4S6 1674 aa8.37□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 SNAPC4Q5SXM2 1469 aa8.37□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 NLRP13Q86W25 1043 aa8.37□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 PKNOX2Q96KN3 472 aa8.37□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 FRAT1Q92837 279 aaPredicted RBP8.37□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 RPRD2Q5VT52 1461 aaKnown RBP8.37□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 DENND4BO75064 1496 aaPredicted RBP8.36□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 POLA1P09884 1462 aaPredicted RBP8.36□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 SPATA31E1Q6ZUB1 1445 aa8.35□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 PDE3BQ13370 1112 aa8.35□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 SUPT6HQ7KZ85 1726 aaKnown RBP8.35□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 TOPBP1Q92547 1522 aa8.35□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 EHBP1L1Q8N3D4 1523 aa8.34□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 ROCK2O75116 1388 aaKnown RBP8.34□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 KTN1Q86UP2 1357 aaKnown RBP8.34□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 PDE4CQ08493 712 aa8.34□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 C20orf194Q5TEA3 1177 aa8.34□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 KDM6BO15054 1643 aa8.34□□□□□ -1.07
GTF2IRD2B-204ENST00000611835 BRD4O60885 1362 aaPredicted RBP8.34□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 FRAT2O75474 233 aaPredicted RBP8.33□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 MIA2Q96PC5 1412 aa8.33□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 NUP155O75694 1391 aa8.33□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 URB2Q14146 1524 aaKnown RBP8.33□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 WDR62O43379 1518 aa8.33□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 ABCA10Q8WWZ4 1543 aa8.33□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 GRIN2BQ13224 1484 aa8.33□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 WDR43Q15061 677 aaKnown RBP eCLIP8.33□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 DNAJC5Q9H3Z4 198 aa8.33□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 C14orf37Q86TY3 774 aa8.32□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.32□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 ARID4BQ4LE39 1312 aaPredicted RBP8.32□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 MRC2Q9UBG0 1479 aa8.32□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 CDK13Q14004 1512 aaKnown RBP8.32□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 UGGT2Q9NYU1 1516 aa8.32□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 WASHC2CQ9Y4E1 1318 aa8.31□□□□□ -1.08
GTF2IRD2B-204ENST00000611835 DAPK1P53355 1430 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms