RNA–Protein interactions for RNA: ENST00000611835.4

GTF2IRD2B-204, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-204ENST00000611835 NISCHQ9Y2I1 1504 aa11.91□□□□□ -0.5
GTF2IRD2B-204ENST00000611835 SHROOM4Q9ULL8 1493 aa10.86□□□□□ -0.67
GTF2IRD2B-204ENST00000611835 SUPT5HO00267 1087 aaKnown RBP10.85□□□□□ -0.67
GTF2IRD2B-204ENST00000611835 HRCP23327 699 aa10.62□□□□□ -0.71
GTF2IRD2B-204ENST00000611835 PCGF6Q9BYE7 350 aa10.61□□□□□ -0.71
GTF2IRD2B-204ENST00000611835 PPARGC1BQ86YN6 1023 aaKnown RBP10.51□□□□□ -0.73
GTF2IRD2B-204ENST00000611835 DCAF8L2P0C7V8 631 aa10.5□□□□□ -0.73
GTF2IRD2B-204ENST00000611835 SLC24A1O60721 1099 aa10.44□□□□□ -0.74
GTF2IRD2B-204ENST00000611835 CHIC1Q5VXU3 224 aa10.44□□□□□ -0.74
GTF2IRD2B-204ENST00000611835 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
GTF2IRD2B-204ENST00000611835 MYO15BQ96JP2 1530 aa10.33□□□□□ -0.76
GTF2IRD2B-204ENST00000611835 LOC105371045A0A1W2PR82 267 aa10.3□□□□□ -0.76
GTF2IRD2B-204ENST00000611835 MYT1Q01538 1121 aa10.22□□□□□ -0.77
GTF2IRD2B-204ENST00000611835 TRIM26Q12899 539 aaPredicted RBP10.18□□□□□ -0.78
GTF2IRD2B-204ENST00000611835 EHMT2Q96KQ7 1210 aa10.15□□□□□ -0.78
GTF2IRD2B-204ENST00000611835 PELP1Q8IZL8 1130 aaKnown RBP10.13□□□□□ -0.79
GTF2IRD2B-204ENST00000611835 FAM9AQ8IZU1 332 aaPredicted RBP10.09□□□□□ -0.79
GTF2IRD2B-204ENST00000611835 ZCCHC6Q5VYS8 1495 aaKnown RBP10.07□□□□□ -0.8
GTF2IRD2B-204ENST00000611835 ZEB1P37275 1124 aaPredicted RBP10.06□□□□□ -0.8
GTF2IRD2B-204ENST00000611835 TTBK1Q5TCY1 1321 aaPredicted RBP10.06□□□□□ -0.8
GTF2IRD2B-204ENST00000611835 DCAF1Q9Y4B6 1507 aa10.06□□□□□ -0.8
GTF2IRD2B-204ENST00000611835 SCAF1Q9H7N4 1312 aaKnown RBP10□□□□□ -0.81
GTF2IRD2B-204ENST00000611835 TRIM41Q8WV44 630 aa9.98□□□□□ -0.81
GTF2IRD2B-204ENST00000611835 CCER1Q8TC90 406 aaPredicted RBP9.88□□□□□ -0.83
GTF2IRD2B-204ENST00000611835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.86□□□□□ -0.83
GTF2IRD2B-204ENST00000611835 ACIN1Q9UKV3 1341 aaKnown RBP9.81□□□□□ -0.84
GTF2IRD2B-204ENST00000611835 CENPBP07199 599 aaPredicted RBP9.81□□□□□ -0.84
GTF2IRD2B-204ENST00000611835 NEUROD1Q13562 356 aa9.81□□□□□ -0.84
GTF2IRD2B-204ENST00000611835 GTF3C3Q9Y5Q9 886 aa9.81□□□□□ -0.84
GTF2IRD2B-204ENST00000611835 DIEXFQ68CQ4 756 aaKnown RBP9.77□□□□□ -0.85
GTF2IRD2B-204ENST00000611835 DAXXQ9UER7 740 aaPredicted RBP9.76□□□□□ -0.85
GTF2IRD2B-204ENST00000611835 PRKCSHP14314 528 aaPredicted RBP9.75□□□□□ -0.85
GTF2IRD2B-204ENST00000611835 YTHDC1Q96MU7 727 aaKnown RBP9.74□□□□□ -0.85
GTF2IRD2B-204ENST00000611835 APLP2Q06481 763 aa9.74□□□□□ -0.85
GTF2IRD2B-204ENST00000611835 ERICH6Q7L0X2 663 aa9.69□□□□□ -0.86
GTF2IRD2B-204ENST00000611835 RSF1Q96T23 1441 aaPredicted RBP9.64□□□□□ -0.87
GTF2IRD2B-204ENST00000611835 NACADO15069 1562 aa9.59□□□□□ -0.87
GTF2IRD2B-204ENST00000611835 ZNF316A6NFI3 1004 aaPredicted RBP9.56□□□□□ -0.88
GTF2IRD2B-204ENST00000611835 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
GTF2IRD2B-204ENST00000611835 HNRNPUL2Q1KMD3 747 aaKnown RBP9.53□□□□□ -0.88
GTF2IRD2B-204ENST00000611835 SCRIBQ14160 1630 aa9.53□□□□□ -0.88
GTF2IRD2B-204ENST00000611835 ABCC9O60706 1549 aa9.53□□□□□ -0.88
GTF2IRD2B-204ENST00000611835 RB1CC1Q8TDY2 1594 aa9.53□□□□□ -0.88
GTF2IRD2B-204ENST00000611835 MIER1Q8N108 512 aa9.5□□□□□ -0.89
GTF2IRD2B-204ENST00000611835 RANGAP1P46060 587 aaPredicted RBP9.48□□□□□ -0.89
GTF2IRD2B-204ENST00000611835 CECR2Q9BXF3 1484 aa9.42□□□□□ -0.9
GTF2IRD2B-204ENST00000611835 CEP162Q5TB80 1403 aa9.38□□□□□ -0.91
GTF2IRD2B-204ENST00000611835 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
GTF2IRD2B-204ENST00000611835 MROH2BQ7Z745 1585 aa9.34□□□□□ -0.91
GTF2IRD2B-204ENST00000611835 SOGA1O94964 1423 aa9.31□□□□□ -0.92
GTF2IRD2B-204ENST00000611835 CCDC88BA6NC98 1476 aa9.3□□□□□ -0.92
GTF2IRD2B-204ENST00000611835 TNIKQ9UKE5 1360 aa9.29□□□□□ -0.92
GTF2IRD2B-204ENST00000611835 UNC13AQ9UPW8 1703 aa9.29□□□□□ -0.92
GTF2IRD2B-204ENST00000611835 NCBP3Q53F19 620 aaKnown RBP9.29□□□□□ -0.92
GTF2IRD2B-204ENST00000611835 BCANQ96GW7 911 aa9.29□□□□□ -0.92
GTF2IRD2B-204ENST00000611835 SUPT16HQ9Y5B9 1047 aaKnown RBP9.28□□□□□ -0.92
GTF2IRD2B-204ENST00000611835 WRNQ14191 1432 aaPredicted RBP eCLIP9.28□□□□□ -0.92
GTF2IRD2B-204ENST00000611835 ABCC8Q09428 1581 aa9.28□□□□□ -0.92
GTF2IRD2B-204ENST00000611835 WIZO95785 1651 aa9.27□□□□□ -0.93
GTF2IRD2B-204ENST00000611835 ITGAEP38570 1179 aa9.25□□□□□ -0.93
GTF2IRD2B-204ENST00000611835 RUSC2Q8N2Y8 1516 aa9.22□□□□□ -0.93
GTF2IRD2B-204ENST00000611835 TSHZ2Q9NRE2 1034 aa9.2□□□□□ -0.94
GTF2IRD2B-204ENST00000611835 ANP32EQ9BTT0 268 aa9.19□□□□□ -0.94
GTF2IRD2B-204ENST00000611835 BICRAQ9NZM4 1560 aa9.19□□□□□ -0.94
GTF2IRD2B-204ENST00000611835 GOLGA3Q08378 1498 aa9.19□□□□□ -0.94
GTF2IRD2B-204ENST00000611835 CLIP1P30622 1438 aa9.18□□□□□ -0.94
GTF2IRD2B-204ENST00000611835 CLSPNQ9HAW4 1339 aa9.18□□□□□ -0.94
GTF2IRD2B-204ENST00000611835 FKBP8Q14318 412 aa9.17□□□□□ -0.94
GTF2IRD2B-204ENST00000611835 NEFLP07196 543 aa9.16□□□□□ -0.94
GTF2IRD2B-204ENST00000611835 EEA1Q15075 1411 aa9.16□□□□□ -0.94
GTF2IRD2B-204ENST00000611835 KCNH8Q96L42 1107 aa9.15□□□□□ -0.94
GTF2IRD2B-204ENST00000611835 PABPN1Q86U42 306 aaKnown RBP eCLIP9.13□□□□□ -0.95
GTF2IRD2B-204ENST00000611835 BAZ1AQ9NRL2 1556 aaPredicted RBP9.12□□□□□ -0.95
GTF2IRD2B-204ENST00000611835 DDX10Q13206 875 aaKnown RBP9.12□□□□□ -0.95
GTF2IRD2B-204ENST00000611835 BCL11AQ9H165 835 aa9.12□□□□□ -0.95
GTF2IRD2B-204ENST00000611835 EIF5BO60841 1220 aaKnown RBP9.11□□□□□ -0.95
GTF2IRD2B-204ENST00000611835 VPS8Q8N3P4 1428 aa9.09□□□□□ -0.95
GTF2IRD2B-204ENST00000611835 TRIM52Q96A61 297 aa9.09□□□□□ -0.95
GTF2IRD2B-204ENST00000611835 CEP164Q9UPV0 1460 aa9.09□□□□□ -0.95
GTF2IRD2B-204ENST00000611835 DHX57Q6P158 1386 aaKnown RBP9.08□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 KANK4Q5T7N3 995 aaPredicted RBP9.08□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 HIRIP3Q9BW71 556 aaPredicted RBP9.08□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 RTN4Q9NQC3 1192 aaKnown RBP9.07□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 PLPPR3Q6T4P5 718 aa9.06□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 ATP1B4Q9UN42 357 aaPredicted RBP9.06□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 TOP2AP11388 1531 aaKnown RBP9.06□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 ARXQ96QS3 562 aa9.06□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 RBM19Q9Y4C8 960 aaKnown RBP9.04□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 SMARCA2P51531 1590 aa9.03□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 RAPGEF2Q9Y4G8 1499 aa9.02□□□□□ -0.96
GTF2IRD2B-204ENST00000611835 FAM50AQ14320 339 aaKnown RBP9.02□□□□□ -0.97
GTF2IRD2B-204ENST00000611835 SMARCA4P51532 1647 aa9.02□□□□□ -0.97
GTF2IRD2B-204ENST00000611835 ANP32CO43423 234 aa9.01□□□□□ -0.97
GTF2IRD2B-204ENST00000611835 PEG3Q9GZU2 1588 aa9.01□□□□□ -0.97
GTF2IRD2B-204ENST00000611835 SIN3AQ96ST3 1273 aa9.01□□□□□ -0.97
GTF2IRD2B-204ENST00000611835 IRX6P78412 446 aaPredicted RBP9□□□□□ -0.97
GTF2IRD2B-204ENST00000611835 CCNB3Q8WWL7 1395 aa8.96□□□□□ -0.98
GTF2IRD2B-204ENST00000611835 CDK11AQ9UQ88 783 aaPredicted RBP8.96□□□□□ -0.98
GTF2IRD2B-204ENST00000611835 KIF21BO75037 1637 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms