RNA–Protein interactions for RNA: ENST00000611578.4

EPHB6-207, Transcript of EPH receptor B6, humanhuman

TSL 1 (best)

Gene EPHB6, Length 3,224 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB6-207ENST00000611578 EFCAB5A4FU69 1503 aa17.43■□□□□ 0.38
EPHB6-207ENST00000611578 KDM2AQ9Y2K7 1162 aa17.42■□□□□ 0.38
EPHB6-207ENST00000611578 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
EPHB6-207ENST00000611578 MPHOSPH9Q99550 1183 aa17.42■□□□□ 0.38
EPHB6-207ENST00000611578 EXOC6Q8TAG9 804 aa17.41■□□□□ 0.38
EPHB6-207ENST00000611578 NUDCQ9Y266 331 aa17.41■□□□□ 0.38
EPHB6-207ENST00000611578 ARXQ96QS3 562 aa17.41■□□□□ 0.38
EPHB6-207ENST00000611578 CTTNBP2Q8WZ74 1663 aa17.41■□□□□ 0.38
EPHB6-207ENST00000611578 NBPF8Q3BBV2 869 aa17.38■□□□□ 0.37
EPHB6-207ENST00000611578 PLIN1O60240 522 aa17.38■□□□□ 0.37
EPHB6-207ENST00000611578 ZNF777Q9ULD5 760 aaPredicted RBP17.38■□□□□ 0.37
EPHB6-207ENST00000611578 KIF7Q2M1P5 1343 aa17.37■□□□□ 0.37
EPHB6-207ENST00000611578 ABCA5Q8WWZ7 1642 aa17.37■□□□□ 0.37
EPHB6-207ENST00000611578 CFAP43Q8NDM7 1665 aa17.37■□□□□ 0.37
EPHB6-207ENST00000611578 FBLN2P98095 1184 aa17.36■□□□□ 0.37
EPHB6-207ENST00000611578 CCDC7Q96M83 1385 aa17.36■□□□□ 0.37
EPHB6-207ENST00000611578 CNTLNQ9NXG0 1405 aa17.36■□□□□ 0.37
EPHB6-207ENST00000611578 BRPF3Q9ULD4 1205 aa17.36■□□□□ 0.37
EPHB6-207ENST00000611578 PTPRKQ15262 1439 aa17.35■□□□□ 0.37
EPHB6-207ENST00000611578 FGD6Q6ZV73 1430 aa17.35■□□□□ 0.37
EPHB6-207ENST00000611578 UACAQ9BZF9 1416 aa17.35■□□□□ 0.37
EPHB6-207ENST00000611578 SNAPC4Q5SXM2 1469 aa17.34■□□□□ 0.37
EPHB6-207ENST00000611578 PDE4AP27815 886 aa17.33■□□□□ 0.37
EPHB6-207ENST00000611578 NCOA2Q15596 1464 aa17.29■□□□□ 0.36
EPHB6-207ENST00000611578 ZNF608Q9ULD9 1512 aaPredicted RBP17.29■□□□□ 0.36
EPHB6-207ENST00000611578 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
EPHB6-207ENST00000611578 MRC2Q9UBG0 1479 aa17.28■□□□□ 0.36
EPHB6-207ENST00000611578 RCAN3Q9UKA8 241 aa17.26■□□□□ 0.35
EPHB6-207ENST00000611578 NAIPQ13075 1403 aa17.26■□□□□ 0.35
EPHB6-207ENST00000611578 RGS3P49796 1198 aa17.25■□□□□ 0.35
EPHB6-207ENST00000611578 SAMD9Q5K651 1589 aa17.25■□□□□ 0.35
EPHB6-207ENST00000611578 MYOM3Q5VTT5 1437 aa17.24■□□□□ 0.35
EPHB6-207ENST00000611578 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
EPHB6-207ENST00000611578 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
EPHB6-207ENST00000611578 CDCA7LQ96GN5 454 aa17.23■□□□□ 0.35
EPHB6-207ENST00000611578 CARD11Q9BXL7 1154 aa17.23■□□□□ 0.35
EPHB6-207ENST00000611578 PPM1GO15355 546 aaPredicted RBP17.22■□□□□ 0.35
EPHB6-207ENST00000611578 RRP1P56182 461 aaKnown RBP17.22■□□□□ 0.35
EPHB6-207ENST00000611578 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
EPHB6-207ENST00000611578 HFM1A2PYH4 1435 aa17.22■□□□□ 0.35
EPHB6-207ENST00000611578 CC2D1BQ5T0F9 858 aaKnown RBP17.21■□□□□ 0.35
EPHB6-207ENST00000611578 CDK13Q14004 1512 aaKnown RBP17.2■□□□□ 0.34
EPHB6-207ENST00000611578 LRRIQ1Q96JM4 1722 aa17.2■□□□□ 0.34
EPHB6-207ENST00000611578 IQGAP2Q13576 1575 aa17.2■□□□□ 0.34
EPHB6-207ENST00000611578 TCERG1O14776 1098 aaKnown RBP17.2■□□□□ 0.34
EPHB6-207ENST00000611578 PBRM1Q86U86 1689 aa17.2■□□□□ 0.34
EPHB6-207ENST00000611578 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
EPHB6-207ENST00000611578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.19■□□□□ 0.34
EPHB6-207ENST00000611578 UBE2Q2Q8WVN8 375 aa17.19■□□□□ 0.34
EPHB6-207ENST00000611578 MAGI3Q5TCQ9 1506 aa17.18■□□□□ 0.34
EPHB6-207ENST00000611578 RGL3Q3MIN7 710 aa17.17■□□□□ 0.34
EPHB6-207ENST00000611578 PNISRQ8TF01 805 aaKnown RBP17.17■□□□□ 0.34
EPHB6-207ENST00000611578 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
EPHB6-207ENST00000611578 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
EPHB6-207ENST00000611578 GSE1Q14687 1217 aa17.16■□□□□ 0.34
EPHB6-207ENST00000611578 FRAT1Q92837 279 aaPredicted RBP17.16■□□□□ 0.34
EPHB6-207ENST00000611578 ADAMTS12P58397 1594 aa17.16■□□□□ 0.34
EPHB6-207ENST00000611578 EHBP1L1Q8N3D4 1523 aa17.15■□□□□ 0.34
EPHB6-207ENST00000611578 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
EPHB6-207ENST00000611578 EPRSP07814 1512 aaKnown RBP17.15■□□□□ 0.34
EPHB6-207ENST00000611578 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
EPHB6-207ENST00000611578 BACH2Q9BYV9 841 aa17.15■□□□□ 0.34
EPHB6-207ENST00000611578 IFT140Q96RY7 1462 aa17.14■□□□□ 0.33
EPHB6-207ENST00000611578 ST20-MTHFSA0A0A6YYL1 179 aa17.14■□□□□ 0.33
EPHB6-207ENST00000611578 PTPN23Q9H3S7 1636 aa17.13■□□□□ 0.33
EPHB6-207ENST00000611578 NCOA1Q15788 1441 aa17.13■□□□□ 0.33
EPHB6-207ENST00000611578 PKD2Q13563 968 aa17.13■□□□□ 0.33
EPHB6-207ENST00000611578 USP47Q96K76 1375 aa17.12■□□□□ 0.33
EPHB6-207ENST00000611578 DCAF11Q8TEB1 546 aa17.11■□□□□ 0.33
EPHB6-207ENST00000611578 DDRGK1Q96HY6 314 aa17.11■□□□□ 0.33
EPHB6-207ENST00000611578 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
EPHB6-207ENST00000611578 UGGT2Q9NYU1 1516 aa17.1■□□□□ 0.33
EPHB6-207ENST00000611578 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
EPHB6-207ENST00000611578 FRAT2O75474 233 aaPredicted RBP17.08■□□□□ 0.33
EPHB6-207ENST00000611578 C20orf194Q5TEA3 1177 aa17.07■□□□□ 0.32
EPHB6-207ENST00000611578 SPRYD3Q8NCJ5 442 aa17.07■□□□□ 0.32
EPHB6-207ENST00000611578 SLKQ9H2G2 1235 aaPredicted RBP17.07■□□□□ 0.32
EPHB6-207ENST00000611578 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
EPHB6-207ENST00000611578 KIAA0586Q9BVV6 1533 aa17.06■□□□□ 0.32
EPHB6-207ENST00000611578 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
EPHB6-207ENST00000611578 WDR62O43379 1518 aa17.04■□□□□ 0.32
EPHB6-207ENST00000611578 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
EPHB6-207ENST00000611578 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
EPHB6-207ENST00000611578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
EPHB6-207ENST00000611578 CFDP1Q9UEE9 299 aaPredicted RBP17.03■□□□□ 0.32
EPHB6-207ENST00000611578 EIF4G3O43432 1585 aaKnown RBP17.03■□□□□ 0.32
EPHB6-207ENST00000611578 DISP1Q96F81 1524 aa17.02■□□□□ 0.32
EPHB6-207ENST00000611578 MYBBP1AQ9BQG0 1328 aaKnown RBP17■□□□□ 0.31
EPHB6-207ENST00000611578 PRG4Q92954 1404 aaPredicted RBP17■□□□□ 0.31
EPHB6-207ENST00000611578 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
EPHB6-207ENST00000611578 ARID4BQ4LE39 1312 aaPredicted RBP16.99■□□□□ 0.31
EPHB6-207ENST00000611578 PLB1Q6P1J6 1458 aa16.99■□□□□ 0.31
EPHB6-207ENST00000611578 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
EPHB6-207ENST00000611578 ARHGEF11O15085 1522 aa16.99■□□□□ 0.31
EPHB6-207ENST00000611578 GZF1Q9H116 711 aaPredicted RBP16.98■□□□□ 0.31
EPHB6-207ENST00000611578 KIAA0556O60303 1618 aa16.98■□□□□ 0.31
EPHB6-207ENST00000611578 KDM5BQ9UGL1 1544 aa16.97■□□□□ 0.31
EPHB6-207ENST00000611578 ANKRD30BQ9BXX2 1392 aa16.97■□□□□ 0.31
EPHB6-207ENST00000611578 KDM6BO15054 1643 aa16.97■□□□□ 0.31
EPHB6-207ENST00000611578 DHX29Q7Z478 1369 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms