RNA–Protein interactions for RNA: ENST00000611578.4

EPHB6-207, Transcript of EPH receptor B6, humanhuman

TSL 1 (best)

Gene EPHB6, Length 3,224 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB6-207ENST00000611578 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.61
EPHB6-207ENST00000611578 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
EPHB6-207ENST00000611578 SUPT5HO00267 1087 aaKnown RBP22.22■■□□□ 1.15
EPHB6-207ENST00000611578 PCGF6Q9BYE7 350 aa21.79■■□□□ 1.08
EPHB6-207ENST00000611578 PPARGC1BQ86YN6 1023 aaKnown RBP21.69■■□□□ 1.06
EPHB6-207ENST00000611578 HRCP23327 699 aa21.65■■□□□ 1.06
EPHB6-207ENST00000611578 DCAF8L2P0C7V8 631 aa21.52■■□□□ 1.04
EPHB6-207ENST00000611578 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
EPHB6-207ENST00000611578 CHIC1Q5VXU3 224 aa21.21■□□□□ 0.99
EPHB6-207ENST00000611578 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
EPHB6-207ENST00000611578 LOC105371045A0A1W2PR82 267 aa21.12■□□□□ 0.97
EPHB6-207ENST00000611578 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
EPHB6-207ENST00000611578 EHMT2Q96KQ7 1210 aa21.05■□□□□ 0.96
EPHB6-207ENST00000611578 FAM9AQ8IZU1 332 aaPredicted RBP20.74■□□□□ 0.91
EPHB6-207ENST00000611578 TRIM26Q12899 539 aaPredicted RBP20.69■□□□□ 0.9
EPHB6-207ENST00000611578 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
EPHB6-207ENST00000611578 SCAF1Q9H7N4 1312 aaKnown RBP20.54■□□□□ 0.88
EPHB6-207ENST00000611578 TTBK1Q5TCY1 1321 aaPredicted RBP20.43■□□□□ 0.86
EPHB6-207ENST00000611578 DCAF1Q9Y4B6 1507 aa20.39■□□□□ 0.85
EPHB6-207ENST00000611578 ZEB1P37275 1124 aaPredicted RBP20.37■□□□□ 0.85
EPHB6-207ENST00000611578 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
EPHB6-207ENST00000611578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.24■□□□□ 0.83
EPHB6-207ENST00000611578 ABCC9O60706 1549 aa20.23■□□□□ 0.83
EPHB6-207ENST00000611578 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
EPHB6-207ENST00000611578 SCRIBQ14160 1630 aa20.18■□□□□ 0.82
EPHB6-207ENST00000611578 YTHDC1Q96MU7 727 aaKnown RBP20.14■□□□□ 0.82
EPHB6-207ENST00000611578 GTF3C3Q9Y5Q9 886 aa20.14■□□□□ 0.81
EPHB6-207ENST00000611578 NEUROD1Q13562 356 aa20.13■□□□□ 0.81
EPHB6-207ENST00000611578 ACIN1Q9UKV3 1341 aaKnown RBP20.05■□□□□ 0.8
EPHB6-207ENST00000611578 MYT1Q01538 1121 aa20.02■□□□□ 0.79
EPHB6-207ENST00000611578 CENPBP07199 599 aaPredicted RBP20■□□□□ 0.79
EPHB6-207ENST00000611578 DIEXFQ68CQ4 756 aaKnown RBP19.97■□□□□ 0.79
EPHB6-207ENST00000611578 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
EPHB6-207ENST00000611578 NACADO15069 1562 aa19.76■□□□□ 0.75
EPHB6-207ENST00000611578 CECR2Q9BXF3 1484 aa19.71■□□□□ 0.75
EPHB6-207ENST00000611578 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
EPHB6-207ENST00000611578 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
EPHB6-207ENST00000611578 RANGAP1P46060 587 aaPredicted RBP19.56■□□□□ 0.72
EPHB6-207ENST00000611578 HNRNPUL2Q1KMD3 747 aaKnown RBP19.54■□□□□ 0.72
EPHB6-207ENST00000611578 UBTFP17480 764 aaKnown RBP19.48■□□□□ 0.71
EPHB6-207ENST00000611578 ZNF316A6NFI3 1004 aaPredicted RBP19.46■□□□□ 0.71
EPHB6-207ENST00000611578 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.7
EPHB6-207ENST00000611578 MIER1Q8N108 512 aa19.46■□□□□ 0.7
EPHB6-207ENST00000611578 WIZO95785 1651 aa19.45■□□□□ 0.7
EPHB6-207ENST00000611578 BAZ1AQ9NRL2 1556 aaPredicted RBP19.28■□□□□ 0.68
EPHB6-207ENST00000611578 BCANQ96GW7 911 aa19.2■□□□□ 0.66
EPHB6-207ENST00000611578 APLP2Q06481 763 aa19.18■□□□□ 0.66
EPHB6-207ENST00000611578 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
EPHB6-207ENST00000611578 SMARCA4P51532 1647 aa19.12■□□□□ 0.65
EPHB6-207ENST00000611578 CCDC88BA6NC98 1476 aa19.08■□□□□ 0.64
EPHB6-207ENST00000611578 ABCC8Q09428 1581 aa19.05■□□□□ 0.64
EPHB6-207ENST00000611578 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
EPHB6-207ENST00000611578 ITGAEP38570 1179 aa19.03■□□□□ 0.64
EPHB6-207ENST00000611578 CEP162Q5TB80 1403 aa19■□□□□ 0.63
EPHB6-207ENST00000611578 SUPT16HQ9Y5B9 1047 aaKnown RBP18.97■□□□□ 0.63
EPHB6-207ENST00000611578 BICRAQ9NZM4 1560 aa18.97■□□□□ 0.63
EPHB6-207ENST00000611578 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
EPHB6-207ENST00000611578 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
EPHB6-207ENST00000611578 SOGA1O94964 1423 aa18.9■□□□□ 0.62
EPHB6-207ENST00000611578 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
EPHB6-207ENST00000611578 TSHZ2Q9NRE2 1034 aa18.83■□□□□ 0.61
EPHB6-207ENST00000611578 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
EPHB6-207ENST00000611578 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
EPHB6-207ENST00000611578 FKBP8Q14318 412 aa18.81■□□□□ 0.6
EPHB6-207ENST00000611578 ANP32EQ9BTT0 268 aa18.81■□□□□ 0.6
EPHB6-207ENST00000611578 RUSC2Q8N2Y8 1516 aa18.76■□□□□ 0.59
EPHB6-207ENST00000611578 PRKCSHP14314 528 aaPredicted RBP18.74■□□□□ 0.59
EPHB6-207ENST00000611578 BAZ1BQ9UIG0 1483 aaKnown RBP18.74■□□□□ 0.59
EPHB6-207ENST00000611578 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
EPHB6-207ENST00000611578 HIRIP3Q9BW71 556 aaPredicted RBP18.72■□□□□ 0.59
EPHB6-207ENST00000611578 NEFLP07196 543 aa18.72■□□□□ 0.59
EPHB6-207ENST00000611578 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
EPHB6-207ENST00000611578 TNIKQ9UKE5 1360 aa18.71■□□□□ 0.59
EPHB6-207ENST00000611578 TRIM52Q96A61 297 aa18.68■□□□□ 0.58
EPHB6-207ENST00000611578 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
EPHB6-207ENST00000611578 ERICH6Q7L0X2 663 aa18.64■□□□□ 0.57
EPHB6-207ENST00000611578 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
EPHB6-207ENST00000611578 PEG3Q9GZU2 1588 aa18.61■□□□□ 0.57
EPHB6-207ENST00000611578 CLIP1P30622 1438 aa18.59■□□□□ 0.57
EPHB6-207ENST00000611578 IRX6P78412 446 aaPredicted RBP18.57■□□□□ 0.56
EPHB6-207ENST00000611578 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
EPHB6-207ENST00000611578 EEA1Q15075 1411 aa18.55■□□□□ 0.56
EPHB6-207ENST00000611578 GOLGA3Q08378 1498 aa18.52■□□□□ 0.56
EPHB6-207ENST00000611578 RBM19Q9Y4C8 960 aaKnown RBP18.5■□□□□ 0.55
EPHB6-207ENST00000611578 KANK4Q5T7N3 995 aaPredicted RBP18.48■□□□□ 0.55
EPHB6-207ENST00000611578 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
EPHB6-207ENST00000611578 CNGB1Q14028 1251 aaPredicted RBP18.45■□□□□ 0.54
EPHB6-207ENST00000611578 FAM50AQ14320 339 aaKnown RBP18.43■□□□□ 0.54
EPHB6-207ENST00000611578 SIN3AQ96ST3 1273 aa18.43■□□□□ 0.54
EPHB6-207ENST00000611578 DHX57Q6P158 1386 aaKnown RBP18.41■□□□□ 0.54
EPHB6-207ENST00000611578 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
EPHB6-207ENST00000611578 RAPGEF2Q9Y4G8 1499 aa18.37■□□□□ 0.53
EPHB6-207ENST00000611578 ANP32CO43423 234 aa18.36■□□□□ 0.53
EPHB6-207ENST00000611578 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
EPHB6-207ENST00000611578 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
EPHB6-207ENST00000611578 P3H3Q8IVL6 736 aa18.3■□□□□ 0.52
EPHB6-207ENST00000611578 HNRNPUQ00839 825 aaKnown RBP eCLIP18.29■□□□□ 0.52
EPHB6-207ENST00000611578 CDK11AQ9UQ88 783 aaPredicted RBP18.28■□□□□ 0.52
EPHB6-207ENST00000611578 TOP2BQ02880 1626 aa18.26■□□□□ 0.51
EPHB6-207ENST00000611578 SENP3-EIF4A1A0A087X0R7 540 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms