RNA–Protein interactions for RNA: ENST00000599564.5

GRAMD1A-211, Transcript of GRAM domain containing 1A, humanhuman

TSL 5 BASIC

Gene GRAMD1A, Length 2,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-211ENST00000599564 PDE4AP27815 886 aa22.5■■□□□ 1.19
GRAMD1A-211ENST00000599564 RAD54L2Q9Y4B4 1467 aa22.49■■□□□ 1.19
GRAMD1A-211ENST00000599564 ZNF326Q5BKZ1 582 aaKnown RBP22.48■■□□□ 1.19
GRAMD1A-211ENST00000599564 BRPF3Q9ULD4 1205 aa22.48■■□□□ 1.19
GRAMD1A-211ENST00000599564 LRRIQ1Q96JM4 1722 aa22.48■■□□□ 1.19
GRAMD1A-211ENST00000599564 HECW1Q76N89 1606 aa22.48■■□□□ 1.19
GRAMD1A-211ENST00000599564 DHX29Q7Z478 1369 aaKnown RBP22.47■■□□□ 1.19
GRAMD1A-211ENST00000599564 SKAP1Q86WV1 359 aa22.47■■□□□ 1.19
GRAMD1A-211ENST00000599564 TMC1Q8TDI8 760 aa22.45■■□□□ 1.18
GRAMD1A-211ENST00000599564 SPATA31E1Q6ZUB1 1445 aa22.45■■□□□ 1.18
GRAMD1A-211ENST00000599564 ARID3CA6NKF2 412 aa22.44■■□□□ 1.18
GRAMD1A-211ENST00000599564 PNISRQ8TF01 805 aaKnown RBP22.44■■□□□ 1.18
GRAMD1A-211ENST00000599564 SUPT6HQ7KZ85 1726 aaKnown RBP22.42■■□□□ 1.18
GRAMD1A-211ENST00000599564 RRP1P56182 461 aaKnown RBP22.42■■□□□ 1.18
GRAMD1A-211ENST00000599564 TCERG1O14776 1098 aaKnown RBP22.42■■□□□ 1.18
GRAMD1A-211ENST00000599564 BACH2Q9BYV9 841 aa22.42■■□□□ 1.18
GRAMD1A-211ENST00000599564 USP35Q9P2H5 1018 aa22.41■■□□□ 1.18
GRAMD1A-211ENST00000599564 WASHC2CQ9Y4E1 1318 aa22.39■■□□□ 1.18
GRAMD1A-211ENST00000599564 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.17
GRAMD1A-211ENST00000599564 GCC2Q8IWJ2 1684 aa22.39■■□□□ 1.17
GRAMD1A-211ENST00000599564 TEX14Q8IWB6 1497 aa22.38■■□□□ 1.17
GRAMD1A-211ENST00000599564 ANKRD30BQ9BXX2 1392 aa22.38■■□□□ 1.17
GRAMD1A-211ENST00000599564 PRDM2Q13029 1718 aa22.38■■□□□ 1.17
GRAMD1A-211ENST00000599564 MAGI3Q5TCQ9 1506 aa22.38■■□□□ 1.17
GRAMD1A-211ENST00000599564 CTTNBP2Q8WZ74 1663 aa22.38■■□□□ 1.17
GRAMD1A-211ENST00000599564 SLC4A3P48751 1232 aa22.37■■□□□ 1.17
GRAMD1A-211ENST00000599564 RPRD2Q5VT52 1461 aaKnown RBP22.37■■□□□ 1.17
GRAMD1A-211ENST00000599564 PPM1GO15355 546 aaPredicted RBP22.37■■□□□ 1.17
GRAMD1A-211ENST00000599564 SLC4A1APQ9BWU0 796 aaKnown RBP22.37■■□□□ 1.17
GRAMD1A-211ENST00000599564 UGGT2Q9NYU1 1516 aa22.36■■□□□ 1.17
GRAMD1A-211ENST00000599564 ABCA5Q8WWZ7 1642 aa22.36■■□□□ 1.17
GRAMD1A-211ENST00000599564 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
GRAMD1A-211ENST00000599564 EIF5BO60841 1220 aaKnown RBP22.35■■□□□ 1.17
GRAMD1A-211ENST00000599564 EHBP1L1Q8N3D4 1523 aa22.35■■□□□ 1.17
GRAMD1A-211ENST00000599564 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
GRAMD1A-211ENST00000599564 USP47Q96K76 1375 aa22.32■■□□□ 1.16
GRAMD1A-211ENST00000599564 PLIN1O60240 522 aa22.32■■□□□ 1.16
GRAMD1A-211ENST00000599564 POLR1AO95602 1720 aaPredicted RBP22.32■■□□□ 1.16
GRAMD1A-211ENST00000599564 GSE1Q14687 1217 aa22.31■■□□□ 1.16
GRAMD1A-211ENST00000599564 BCORL1Q5H9F3 1711 aa22.31■■□□□ 1.16
GRAMD1A-211ENST00000599564 NFKBIBQ15653 356 aa22.28■■□□□ 1.16
GRAMD1A-211ENST00000599564 FRAT1Q92837 279 aaPredicted RBP22.27■■□□□ 1.16
GRAMD1A-211ENST00000599564 TCOF1Q13428 1488 aaKnown RBP22.27■■□□□ 1.16
GRAMD1A-211ENST00000599564 MS4A1P11836 297 aa22.26■■□□□ 1.15
GRAMD1A-211ENST00000599564 ARHGEF11O15085 1522 aa22.26■■□□□ 1.15
GRAMD1A-211ENST00000599564 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
GRAMD1A-211ENST00000599564 CDCA7LQ96GN5 454 aa22.26■■□□□ 1.15
GRAMD1A-211ENST00000599564 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
GRAMD1A-211ENST00000599564 MIA2Q96PC5 1412 aa22.24■■□□□ 1.15
GRAMD1A-211ENST00000599564 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
GRAMD1A-211ENST00000599564 SAMD9Q5K651 1589 aa22.22■■□□□ 1.15
GRAMD1A-211ENST00000599564 UBE2Q2Q8WVN8 375 aa22.22■■□□□ 1.15
GRAMD1A-211ENST00000599564 ZNF644Q9H582 1327 aaPredicted RBP22.22■■□□□ 1.15
GRAMD1A-211ENST00000599564 CUL7Q14999 1698 aa22.22■■□□□ 1.15
GRAMD1A-211ENST00000599564 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
GRAMD1A-211ENST00000599564 LRPPRCP42704 1394 aaKnown RBP22.21■■□□□ 1.15
GRAMD1A-211ENST00000599564 DDRGK1Q96HY6 314 aa22.2■■□□□ 1.14
GRAMD1A-211ENST00000599564 CRBNQ96SW2 442 aa22.19■■□□□ 1.14
GRAMD1A-211ENST00000599564 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
GRAMD1A-211ENST00000599564 DAXXQ9UER7 740 aaPredicted RBP22.17■■□□□ 1.14
GRAMD1A-211ENST00000599564 MYBBP1AQ9BQG0 1328 aaKnown RBP22.17■■□□□ 1.14
GRAMD1A-211ENST00000599564 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
GRAMD1A-211ENST00000599564 KIF15Q9NS87 1388 aa22.16■■□□□ 1.14
GRAMD1A-211ENST00000599564 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
GRAMD1A-211ENST00000599564 TOPBP1Q92547 1522 aa22.15■■□□□ 1.14
GRAMD1A-211ENST00000599564 CARD11Q9BXL7 1154 aa22.14■■□□□ 1.14
GRAMD1A-211ENST00000599564 DAPK1P53355 1430 aa22.14■■□□□ 1.13
GRAMD1A-211ENST00000599564 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
GRAMD1A-211ENST00000599564 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
GRAMD1A-211ENST00000599564 ST20-MTHFSA0A0A6YYL1 179 aa22.12■■□□□ 1.13
GRAMD1A-211ENST00000599564 KDM2AQ9Y2K7 1162 aa22.12■■□□□ 1.13
GRAMD1A-211ENST00000599564 FRAT2O75474 233 aaPredicted RBP22.12■■□□□ 1.13
GRAMD1A-211ENST00000599564 C20orf194Q5TEA3 1177 aa22.12■■□□□ 1.13
GRAMD1A-211ENST00000599564 ABCC5O15440 1437 aa22.1■■□□□ 1.13
GRAMD1A-211ENST00000599564 KDM5CP41229 1560 aa22.1■■□□□ 1.13
GRAMD1A-211ENST00000599564 EPRSP07814 1512 aaKnown RBP22.09■■□□□ 1.13
GRAMD1A-211ENST00000599564 PKD2Q13563 968 aa22.08■■□□□ 1.13
GRAMD1A-211ENST00000599564 MBD5Q9P267 1494 aa22.08■■□□□ 1.13
GRAMD1A-211ENST00000599564 RALBP1Q15311 655 aa22.08■■□□□ 1.13
GRAMD1A-211ENST00000599564 ROCK2O75116 1388 aaKnown RBP22.08■■□□□ 1.12
GRAMD1A-211ENST00000599564 ARID4BQ4LE39 1312 aaPredicted RBP22.07■■□□□ 1.12
GRAMD1A-211ENST00000599564 PZPP20742 1482 aa22.07■■□□□ 1.12
GRAMD1A-211ENST00000599564 DCAF11Q8TEB1 546 aa22.06■■□□□ 1.12
GRAMD1A-211ENST00000599564 ROCK1Q13464 1354 aa22.05■■□□□ 1.12
GRAMD1A-211ENST00000599564 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
GRAMD1A-211ENST00000599564 NESP48681 1621 aa22.04■■□□□ 1.12
GRAMD1A-211ENST00000599564 NLRP13Q86W25 1043 aa22.03■■□□□ 1.12
GRAMD1A-211ENST00000599564 KIF14Q15058 1648 aa22.02■■□□□ 1.11
GRAMD1A-211ENST00000599564 RGS3P49796 1198 aa22.01■■□□□ 1.11
GRAMD1A-211ENST00000599564 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
GRAMD1A-211ENST00000599564 C8orf34Q49A92 452 aa21.99■■□□□ 1.11
GRAMD1A-211ENST00000599564 KIAA1107Q9UPP5 1409 aa21.98■■□□□ 1.11
GRAMD1A-211ENST00000599564 ZNF777Q9ULD5 760 aaPredicted RBP21.98■■□□□ 1.11
GRAMD1A-211ENST00000599564 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
GRAMD1A-211ENST00000599564 DNMT1P26358 1616 aaKnown RBP21.97■■□□□ 1.11
GRAMD1A-211ENST00000599564 FAM161AQ3B820 660 aa21.97■■□□□ 1.11
GRAMD1A-211ENST00000599564 KTN1Q86UP2 1357 aaKnown RBP21.96■■□□□ 1.11
GRAMD1A-211ENST00000599564 KDM2BQ8NHM5 1336 aa21.96■■□□□ 1.11
GRAMD1A-211ENST00000599564 RALGAPBQ86X10 1494 aa21.93■■□□□ 1.1
GRAMD1A-211ENST00000599564 LAMC3Q9Y6N6 1575 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms