RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 PPP4R2Q9NY27 417 aa15.21■□□□□ 0.03
ZNF544-213ENST00000599227 CC2D1BQ5T0F9 858 aaKnown RBP15.21■□□□□ 0.02
ZNF544-213ENST00000599227 ABCA10Q8WWZ4 1543 aa15.21■□□□□ 0.02
ZNF544-213ENST00000599227 CARD11Q9BXL7 1154 aa15.2■□□□□ 0.02
ZNF544-213ENST00000599227 CCDC136Q96JN2 1154 aa15.2■□□□□ 0.02
ZNF544-213ENST00000599227 TNNT2P45379 298 aaPredicted RBP15.19■□□□□ 0.02
ZNF544-213ENST00000599227 KIF7Q2M1P5 1343 aa15.19■□□□□ 0.02
ZNF544-213ENST00000599227 CDK13Q14004 1512 aaKnown RBP15.19■□□□□ 0.02
ZNF544-213ENST00000599227 PLEKHG5O94827 1062 aa15.18■□□□□ 0.02
ZNF544-213ENST00000599227 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
ZNF544-213ENST00000599227 PTPN23Q9H3S7 1636 aa15.17■□□□□ 0.02
ZNF544-213ENST00000599227 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
ZNF544-213ENST00000599227 NUTM2DQ5VT03 806 aaPredicted RBP15.16■□□□□ 0.02
ZNF544-213ENST00000599227 CCDC7Q96M83 1385 aa15.16■□□□□ 0.02
ZNF544-213ENST00000599227 CFAP43Q8NDM7 1665 aa15.15■□□□□ 0.02
ZNF544-213ENST00000599227 JPH4Q96JJ6 628 aa15.14■□□□□ 0.01
ZNF544-213ENST00000599227 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
ZNF544-213ENST00000599227 EFCAB5A4FU69 1503 aa15.14■□□□□ 0.01
ZNF544-213ENST00000599227 KCNA4P22459 653 aa15.12■□□□□ 0.01
ZNF544-213ENST00000599227 SAFB2Q14151 953 aaKnown RBP eCLIP15.12■□□□□ 0.011e-6■■□□□ 12.4
ZNF544-213ENST00000599227 NEUROD2Q15784 382 aa15.11■□□□□ 0.01
ZNF544-213ENST00000599227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.11■□□□□ 0.01
ZNF544-213ENST00000599227 CNTLNQ9NXG0 1405 aa15.11■□□□□ 0.01
ZNF544-213ENST00000599227 AKNAQ7Z591 1439 aa15.1■□□□□ 0.01
ZNF544-213ENST00000599227 MAGI3Q5TCQ9 1506 aa15.09■□□□□ 0.01
ZNF544-213ENST00000599227 KDM6BO15054 1643 aa15.08■□□□□ 0
ZNF544-213ENST00000599227 ST20-MTHFSA0A0A6YYL1 179 aa15.08■□□□□ 0
ZNF544-213ENST00000599227 GRIN2BQ13224 1484 aa15.07■□□□□ 0
ZNF544-213ENST00000599227 NUP155O75694 1391 aa15.06■□□□□ 0
ZNF544-213ENST00000599227 SUPT6HQ7KZ85 1726 aaKnown RBP15.05■□□□□ 0
ZNF544-213ENST00000599227 ZBED9Q6R2W3 1325 aa15.05■□□□□ 0
ZNF544-213ENST00000599227 EPRSP07814 1512 aaKnown RBP15.05■□□□□ -0
ZNF544-213ENST00000599227 USP47Q96K76 1375 aa15.04■□□□□ -0
ZNF544-213ENST00000599227 PRDM2Q13029 1718 aa15.04■□□□□ -0
ZNF544-213ENST00000599227 PRG4Q92954 1404 aaPredicted RBP15.04■□□□□ -0
ZNF544-213ENST00000599227 PAK3O75914 559 aaPredicted RBP15.03■□□□□ -0
ZNF544-213ENST00000599227 EHBP1L1Q8N3D4 1523 aa15.03■□□□□ -0
ZNF544-213ENST00000599227 ANKRD30BQ9BXX2 1392 aa15.02■□□□□ -0
ZNF544-213ENST00000599227 THOC2Q8NI27 1593 aaKnown RBP15.02□□□□□ -0.01
ZNF544-213ENST00000599227 CTTNBP2Q8WZ74 1663 aa15.02□□□□□ -0.01
ZNF544-213ENST00000599227 ANP32AP39687 249 aaKnown RBP15.01□□□□□ -0.01
ZNF544-213ENST00000599227 CUL7Q14999 1698 aa15.01□□□□□ -0.01
ZNF544-213ENST00000599227 SKAP1Q86WV1 359 aa15□□□□□ -0.01
ZNF544-213ENST00000599227 NUDCQ9Y266 331 aa15□□□□□ -0.01
ZNF544-213ENST00000599227 PLIN1O60240 522 aa15□□□□□ -0.01
ZNF544-213ENST00000599227 DENND4BO75064 1496 aaPredicted RBP14.99□□□□□ -0.01
ZNF544-213ENST00000599227 GGT6Q6P531 493 aa14.99□□□□□ -0.01
ZNF544-213ENST00000599227 UGGT2Q9NYU1 1516 aa14.99□□□□□ -0.01
ZNF544-213ENST00000599227 ABCC5O15440 1437 aa14.99□□□□□ -0.01
ZNF544-213ENST00000599227 DAPK1P53355 1430 aa14.99□□□□□ -0.01
ZNF544-213ENST00000599227 NOP58Q9Y2X3 529 aaKnown RBP14.98□□□□□ -0.01
ZNF544-213ENST00000599227 NCOA1Q15788 1441 aa14.98□□□□□ -0.01
ZNF544-213ENST00000599227 FANCIQ9NVI1 1328 aa14.98□□□□□ -0.01
ZNF544-213ENST00000599227 MLECQ14165 292 aa14.98□□□□□ -0.01
ZNF544-213ENST00000599227 LAS1LQ9Y4W2 734 aaKnown RBP14.97□□□□□ -0.01
ZNF544-213ENST00000599227 ZNF608Q9ULD9 1512 aaPredicted RBP14.97□□□□□ -0.01
ZNF544-213ENST00000599227 DEKP35659 375 aaKnown RBP14.97□□□□□ -0.01
ZNF544-213ENST00000599227 EXOC6Q8TAG9 804 aa14.97□□□□□ -0.01
ZNF544-213ENST00000599227 RTL5Q5HYW3 569 aaPredicted RBP14.96□□□□□ -0.01
ZNF544-213ENST00000599227 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.01
ZNF544-213ENST00000599227 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
ZNF544-213ENST00000599227 KDM5BQ9UGL1 1544 aa14.94□□□□□ -0.02
ZNF544-213ENST00000599227 LRRIQ1Q96JM4 1722 aa14.94□□□□□ -0.02
ZNF544-213ENST00000599227 NBPF1Q3BBV0 1214 aa14.94□□□□□ -0.02
ZNF544-213ENST00000599227 LAMC3Q9Y6N6 1575 aa14.93□□□□□ -0.02
ZNF544-213ENST00000599227 PPM1GO15355 546 aaPredicted RBP14.93□□□□□ -0.02
ZNF544-213ENST00000599227 CANXP27824 592 aaKnown RBP14.93□□□□□ -0.02
ZNF544-213ENST00000599227 PNISRQ8TF01 805 aaKnown RBP14.92□□□□□ -0.02
ZNF544-213ENST00000599227 STK26Q9P289 416 aa14.91□□□□□ -0.02
ZNF544-213ENST00000599227 PLB1Q6P1J6 1458 aa14.91□□□□□ -0.02
ZNF544-213ENST00000599227 CCDC146Q8IYE0 955 aa14.91□□□□□ -0.02
ZNF544-213ENST00000599227 ARXQ96QS3 562 aa14.91□□□□□ -0.02
ZNF544-213ENST00000599227 RPRD2Q5VT52 1461 aaKnown RBP14.91□□□□□ -0.02
ZNF544-213ENST00000599227 ROCK2O75116 1388 aaKnown RBP14.9□□□□□ -0.02
ZNF544-213ENST00000599227 AFAP1Q8N556 730 aa14.9□□□□□ -0.02
ZNF544-213ENST00000599227 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
ZNF544-213ENST00000599227 MIA2Q96PC5 1412 aa14.9□□□□□ -0.02
ZNF544-213ENST00000599227 ANKRD30AQ9BXX3 1397 aa14.9□□□□□ -0.02
ZNF544-213ENST00000599227 HECW1Q76N89 1606 aa14.9□□□□□ -0.02
ZNF544-213ENST00000599227 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
ZNF544-213ENST00000599227 ERICH6BQ5W0A0 696 aa14.89□□□□□ -0.03
ZNF544-213ENST00000599227 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
ZNF544-213ENST00000599227 RCAN3Q9UKA8 241 aa14.89□□□□□ -0.03
ZNF544-213ENST00000599227 SAMD9Q5K651 1589 aa14.89□□□□□ -0.03
ZNF544-213ENST00000599227 KIF3BO15066 747 aa14.88□□□□□ -0.03
ZNF544-213ENST00000599227 DAXXQ9UER7 740 aaPredicted RBP14.88□□□□□ -0.03
ZNF544-213ENST00000599227 ANKRD50Q9ULJ7 1429 aa14.87□□□□□ -0.03
ZNF544-213ENST00000599227 RTN4Q9NQC3 1192 aaKnown RBP14.87□□□□□ -0.03
ZNF544-213ENST00000599227 SOX12O15370 315 aa14.87□□□□□ -0.03
ZNF544-213ENST00000599227 PRKCSHP14314 528 aaPredicted RBP14.86□□□□□ -0.03
ZNF544-213ENST00000599227 WDR43Q15061 677 aaKnown RBP eCLIP14.86□□□□□ -0.03
ZNF544-213ENST00000599227 RGS3P49796 1198 aa14.85□□□□□ -0.03
ZNF544-213ENST00000599227 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
ZNF544-213ENST00000599227 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
ZNF544-213ENST00000599227 PANK3Q9H999 370 aa14.84□□□□□ -0.03
ZNF544-213ENST00000599227 TCOF1Q13428 1488 aaKnown RBP14.84□□□□□ -0.03
ZNF544-213ENST00000599227 SLC4A3P48751 1232 aa14.84□□□□□ -0.03
ZNF544-213ENST00000599227 NUP153P49790 1475 aaKnown RBP14.83□□□□□ -0.03
ZNF544-213ENST00000599227 RRP1P56182 461 aaKnown RBP14.83□□□□□ -0.03
ZNF544-213ENST00000599227 DHX29Q7Z478 1369 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms