RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 WDR62O43379 1518 aa18.01■□□□□ 0.47
SMG9-207ENST00000598860 EFCAB3Q8N7B9 438 aa17.99■□□□□ 0.47
SMG9-207ENST00000598860 SPRYD3Q8NCJ5 442 aa17.98■□□□□ 0.47
SMG9-207ENST00000598860 DNAJC5Q9H3Z4 198 aa17.97■□□□□ 0.47
SMG9-207ENST00000598860 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
SMG9-207ENST00000598860 MKRN3Q13064 507 aaKnown RBP17.95■□□□□ 0.46
SMG9-207ENST00000598860 PELP1Q8IZL8 1130 aaKnown RBP17.95■□□□□ 0.46
SMG9-207ENST00000598860 NKX1-1Q15270 411 aaPredicted RBP17.93■□□□□ 0.46
SMG9-207ENST00000598860 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
SMG9-207ENST00000598860 URB2Q14146 1524 aaKnown RBP17.91■□□□□ 0.46
SMG9-207ENST00000598860 SOX12O15370 315 aa17.87■□□□□ 0.45
SMG9-207ENST00000598860 BCANQ96GW7 911 aa17.87■□□□□ 0.45
SMG9-207ENST00000598860 MFRPQ9BY79 579 aa17.84■□□□□ 0.45
SMG9-207ENST00000598860 PHF8Q9UPP1 1060 aa17.84■□□□□ 0.45
SMG9-207ENST00000598860 TSHZ2Q9NRE2 1034 aa17.83■□□□□ 0.44
SMG9-207ENST00000598860 IER5LQ5T953 404 aa17.82■□□□□ 0.44
SMG9-207ENST00000598860 SLC39A7Q92504 469 aa17.82■□□□□ 0.44
SMG9-207ENST00000598860 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
SMG9-207ENST00000598860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMG9-207ENST00000598860 NLRP6P59044 892 aa17.79■□□□□ 0.44
SMG9-207ENST00000598860 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
SMG9-207ENST00000598860 C7P10643 843 aa17.77■□□□□ 0.44
SMG9-207ENST00000598860 METRNQ9UJH8 293 aa17.77■□□□□ 0.44
SMG9-207ENST00000598860 GTPBP6O43824 516 aaPredicted RBP17.76■□□□□ 0.43
SMG9-207ENST00000598860 IRX5P78411 483 aaPredicted RBP17.76■□□□□ 0.43
SMG9-207ENST00000598860 FBXO22Q8NEZ5 403 aa17.75■□□□□ 0.43
SMG9-207ENST00000598860 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
SMG9-207ENST00000598860 SEC24BO95487 1268 aa17.73■□□□□ 0.43
SMG9-207ENST00000598860 RYDENQ9NUL5 291 aaKnown RBP17.73■□□□□ 0.43
SMG9-207ENST00000598860 IFT140Q96RY7 1462 aa17.72■□□□□ 0.43
SMG9-207ENST00000598860 PLCG2P16885 1265 aa17.72■□□□□ 0.43
SMG9-207ENST00000598860 OCEL1Q9H607 264 aa17.72■□□□□ 0.43
SMG9-207ENST00000598860 ILDR1Q86SU0 546 aaPredicted RBP17.71■□□□□ 0.43
SMG9-207ENST00000598860 MS4A4AQ96JQ5 239 aa17.71■□□□□ 0.43
SMG9-207ENST00000598860 COLQQ9Y215 455 aaPredicted RBP17.71■□□□□ 0.43
SMG9-207ENST00000598860 POTEFA5A3E0 1075 aa17.68■□□□□ 0.42
SMG9-207ENST00000598860 PDCD7Q8N8D1 485 aaKnown RBP17.68■□□□□ 0.42
SMG9-207ENST00000598860 DPY19L2Q6NUT2 758 aa17.65■□□□□ 0.42
SMG9-207ENST00000598860 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.41
SMG9-207ENST00000598860 PPP1R37O75864 691 aa17.62■□□□□ 0.41
SMG9-207ENST00000598860 POLA1P09884 1462 aaPredicted RBP17.62■□□□□ 0.41
SMG9-207ENST00000598860 SOGA1O94964 1423 aa17.6■□□□□ 0.41
SMG9-207ENST00000598860 CUX1P39880 1505 aa17.59■□□□□ 0.41
SMG9-207ENST00000598860 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.41
SMG9-207ENST00000598860 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
SMG9-207ENST00000598860 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
SMG9-207ENST00000598860 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMG9-207ENST00000598860 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
SMG9-207ENST00000598860 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
SMG9-207ENST00000598860 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
SMG9-207ENST00000598860 WRNQ14191 1432 aaPredicted RBP eCLIP17.5■□□□□ 0.39
SMG9-207ENST00000598860 L3MBTL3Q96JM7 780 aaPredicted RBP17.5■□□□□ 0.39
SMG9-207ENST00000598860 G3V3G9 751 aa17.48■□□□□ 0.39
SMG9-207ENST00000598860 BOLA1Q9Y3E2 137 aa17.48■□□□□ 0.39
SMG9-207ENST00000598860 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
SMG9-207ENST00000598860 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
SMG9-207ENST00000598860 POTEB2H3BUK9 544 aa17.45■□□□□ 0.38
SMG9-207ENST00000598860 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
SMG9-207ENST00000598860 MICALL2Q8IY33 904 aa17.44■□□□□ 0.38
SMG9-207ENST00000598860 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
SMG9-207ENST00000598860 TMEM121BQ9BXQ6 578 aaPredicted RBP17.4■□□□□ 0.38
SMG9-207ENST00000598860 GRIN2BQ13224 1484 aa17.38■□□□□ 0.37
SMG9-207ENST00000598860 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
SMG9-207ENST00000598860 POTEJP0CG39 1038 aa17.38■□□□□ 0.37
SMG9-207ENST00000598860 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
SMG9-207ENST00000598860 CHMP7Q8WUX9 453 aaPredicted RBP17.36■□□□□ 0.37
SMG9-207ENST00000598860 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
SMG9-207ENST00000598860 CHD1O14646 1710 aa17.35■□□□□ 0.37
SMG9-207ENST00000598860 CADPS2Q86UW7 1296 aa17.34■□□□□ 0.37
SMG9-207ENST00000598860 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
SMG9-207ENST00000598860 TPRNQ4KMQ1 711 aa17.32■□□□□ 0.36
SMG9-207ENST00000598860 C3orf67Q6ZVT6 689 aa17.31■□□□□ 0.36
SMG9-207ENST00000598860 NBR1Q14596 966 aa17.3■□□□□ 0.36
SMG9-207ENST00000598860 LHX8Q68G74 356 aa17.29■□□□□ 0.36
SMG9-207ENST00000598860 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
SMG9-207ENST00000598860 ABCA5Q8WWZ7 1642 aa17.29■□□□□ 0.36
SMG9-207ENST00000598860 SYNJ2O15056 1496 aa17.27■□□□□ 0.36
SMG9-207ENST00000598860 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.27■□□□□ 0.36
SMG9-207ENST00000598860 MAMSTRQ6ZN01 415 aa17.24■□□□□ 0.35
SMG9-207ENST00000598860 RIMBP3CA6NJZ7 1639 aa17.23■□□□□ 0.35
SMG9-207ENST00000598860 RIMBP3BA6NNM3 1639 aa17.23■□□□□ 0.35
SMG9-207ENST00000598860 RIMBP3Q9UFD9 1639 aa17.23■□□□□ 0.35
SMG9-207ENST00000598860 SCUBE2Q9NQ36 999 aa17.23■□□□□ 0.35
SMG9-207ENST00000598860 ARHGEF11O15085 1522 aa17.21■□□□□ 0.35
SMG9-207ENST00000598860 TMEM92Q6UXU6 159 aa17.21■□□□□ 0.35
SMG9-207ENST00000598860 NCKAP5LQ9HCH0 1330 aa17.21■□□□□ 0.34
SMG9-207ENST00000598860 PDE4AP27815 886 aa17.19■□□□□ 0.34
SMG9-207ENST00000598860 TMC2Q8TDI7 906 aa17.18■□□□□ 0.34
SMG9-207ENST00000598860 CRISPLD2Q9H0B8 497 aa17.18■□□□□ 0.34
SMG9-207ENST00000598860 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
SMG9-207ENST00000598860 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
SMG9-207ENST00000598860 CYB5RLQ6IPT4 315 aa17.16■□□□□ 0.34
SMG9-207ENST00000598860 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
SMG9-207ENST00000598860 C2orf72A6NCS6 295 aa17.15■□□□□ 0.34
SMG9-207ENST00000598860 LARP6Q9BRS8 491 aaKnown RBP17.15■□□□□ 0.34
SMG9-207ENST00000598860 GPHNQ9NQX3 736 aaPredicted RBP17.15■□□□□ 0.34
SMG9-207ENST00000598860 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
SMG9-207ENST00000598860 OTUD5Q96G74 571 aa17.14■□□□□ 0.33
SMG9-207ENST00000598860 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
SMG9-207ENST00000598860 KIF3CO14782 793 aa17.13■□□□□ 0.33
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