RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 PLSCR2Q9NRY7 297 aa14.86□□□□□ -0.03
LINC00343-206ENST00000598478 SLAIN1Q8ND83 568 aa14.85□□□□□ -0.03
LINC00343-206ENST00000598478 GOLGA2Q08379 1002 aa14.84□□□□□ -0.03
LINC00343-206ENST00000598478 CHD1O14646 1710 aa14.83□□□□□ -0.03
LINC00343-206ENST00000598478 MKRN3Q13064 507 aaKnown RBP14.82□□□□□ -0.04
LINC00343-206ENST00000598478 PDAP1Q13442 181 aaKnown RBP14.82□□□□□ -0.04
LINC00343-206ENST00000598478 IFT140Q96RY7 1462 aa14.82□□□□□ -0.04
LINC00343-206ENST00000598478 EIF4G3O43432 1585 aaKnown RBP14.8□□□□□ -0.04
LINC00343-206ENST00000598478 PDCD7Q8N8D1 485 aaKnown RBP14.79□□□□□ -0.04
LINC00343-206ENST00000598478 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
LINC00343-206ENST00000598478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.74□□□□□ -0.05
LINC00343-206ENST00000598478 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.73□□□□□ -0.05
LINC00343-206ENST00000598478 PCDH10Q9P2E7 1040 aa14.73□□□□□ -0.05
LINC00343-206ENST00000598478 AQRO60306 1485 aaKnown RBP eCLIP14.72□□□□□ -0.05
LINC00343-206ENST00000598478 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
LINC00343-206ENST00000598478 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
LINC00343-206ENST00000598478 L3MBTL3Q96JM7 780 aaPredicted RBP14.69□□□□□ -0.06
LINC00343-206ENST00000598478 CABP2Q9NPB3 220 aa14.69□□□□□ -0.06
LINC00343-206ENST00000598478 ST18O60284 1047 aa14.65□□□□□ -0.06
LINC00343-206ENST00000598478 C3orf67Q6ZVT6 689 aa14.65□□□□□ -0.06
LINC00343-206ENST00000598478 ILDR1Q86SU0 546 aaPredicted RBP14.65□□□□□ -0.06
LINC00343-206ENST00000598478 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
LINC00343-206ENST00000598478 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
LINC00343-206ENST00000598478 CLASP1Q7Z460 1538 aa14.61□□□□□ -0.07
LINC00343-206ENST00000598478 SNPHO15079 494 aa14.6□□□□□ -0.07
LINC00343-206ENST00000598478 DPY19L2Q6NUT2 758 aa14.59□□□□□ -0.07
LINC00343-206ENST00000598478 DNMBPQ6XZF7 1577 aa14.57□□□□□ -0.08
LINC00343-206ENST00000598478 ABCC8Q09428 1581 aa14.55□□□□□ -0.08
LINC00343-206ENST00000598478 RIOK3O14730 519 aaKnown RBP14.54□□□□□ -0.08
LINC00343-206ENST00000598478 RNF25Q96BH1 459 aaPredicted RBP14.53□□□□□ -0.08
LINC00343-206ENST00000598478 SNAPC4Q5SXM2 1469 aa14.52□□□□□ -0.08
LINC00343-206ENST00000598478 TDRD9Q8NDG6 1382 aaKnown RBP14.52□□□□□ -0.08
LINC00343-206ENST00000598478 CDAN1Q8IWY9 1227 aa14.52□□□□□ -0.09
LINC00343-206ENST00000598478 EFCAB3Q8N7B9 438 aa14.52□□□□□ -0.09
LINC00343-206ENST00000598478 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
LINC00343-206ENST00000598478 RAD54L2Q9Y4B4 1467 aa14.51□□□□□ -0.09
LINC00343-206ENST00000598478 G3V3G9 751 aa14.51□□□□□ -0.09
LINC00343-206ENST00000598478 TMEM121BQ9BXQ6 578 aaPredicted RBP14.51□□□□□ -0.09
LINC00343-206ENST00000598478 BOLA1Q9Y3E2 137 aa14.51□□□□□ -0.09
LINC00343-206ENST00000598478 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
LINC00343-206ENST00000598478 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
LINC00343-206ENST00000598478 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
LINC00343-206ENST00000598478 CHMP7Q8WUX9 453 aaPredicted RBP14.5□□□□□ -0.09
LINC00343-206ENST00000598478 VGFO15240 615 aaPredicted RBP14.46□□□□□ -0.09
LINC00343-206ENST00000598478 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.45□□□□□ -0.1
LINC00343-206ENST00000598478 ZFP91Q96JP5 570 aaPredicted RBP14.45□□□□□ -0.1
LINC00343-206ENST00000598478 MARVELD3Q96A59 401 aa14.44□□□□□ -0.1
LINC00343-206ENST00000598478 SOGA1O94964 1423 aa14.43□□□□□ -0.1
LINC00343-206ENST00000598478 ERCC6L2Q5T890 1561 aa14.4□□□□□ -0.1
LINC00343-206ENST00000598478 MAGI1Q96QZ7 1491 aaPredicted RBP14.4□□□□□ -0.1
LINC00343-206ENST00000598478 KIF13AQ9H1H9 1805 aa14.4□□□□□ -0.1
LINC00343-206ENST00000598478 SYNJ2O15056 1496 aa14.38□□□□□ -0.11
LINC00343-206ENST00000598478 KDM4FA0A1W2PPD8 638 aa14.38□□□□□ -0.11
LINC00343-206ENST00000598478 SOX12O15370 315 aa14.38□□□□□ -0.11
LINC00343-206ENST00000598478 GRIN2BQ13224 1484 aa14.36□□□□□ -0.11
LINC00343-206ENST00000598478 EMP3P54852 163 aa14.34□□□□□ -0.11
LINC00343-206ENST00000598478 WDR97A6NE52 1622 aa14.33□□□□□ -0.11
LINC00343-206ENST00000598478 FGD5Q6ZNL6 1462 aa14.33□□□□□ -0.12
LINC00343-206ENST00000598478 MS4A4AQ96JQ5 239 aa14.33□□□□□ -0.12
LINC00343-206ENST00000598478 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
LINC00343-206ENST00000598478 MICALL2Q8IY33 904 aa14.32□□□□□ -0.12
LINC00343-206ENST00000598478 TAOK2Q9UL54 1235 aa14.32□□□□□ -0.12
LINC00343-206ENST00000598478 HOXB3P14651 431 aaPredicted RBP14.3□□□□□ -0.12
LINC00343-206ENST00000598478 BCL11BQ9C0K0 894 aaPredicted RBP14.3□□□□□ -0.12
LINC00343-206ENST00000598478 PBRM1Q86U86 1689 aa14.3□□□□□ -0.12
LINC00343-206ENST00000598478 ECM2O94769 699 aaPredicted RBP14.29□□□□□ -0.12
LINC00343-206ENST00000598478 CEP170Q5SW79 1584 aa14.26□□□□□ -0.13
LINC00343-206ENST00000598478 STK24Q9Y6E0 443 aa14.25□□□□□ -0.13
LINC00343-206ENST00000598478 CUX1P39880 1505 aa14.24□□□□□ -0.13
LINC00343-206ENST00000598478 FAM205CA6NFA0 338 aa14.23□□□□□ -0.13
LINC00343-206ENST00000598478 NLRP6P59044 892 aa14.23□□□□□ -0.13
LINC00343-206ENST00000598478 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
LINC00343-206ENST00000598478 DOK7Q18PE1 504 aa14.23□□□□□ -0.13
LINC00343-206ENST00000598478 TMEM92Q6UXU6 159 aa14.23□□□□□ -0.13
LINC00343-206ENST00000598478 ZNF710Q8N1W2 664 aa14.23□□□□□ -0.13
LINC00343-206ENST00000598478 HS3ST6Q96QI5 342 aa14.23□□□□□ -0.13
LINC00343-206ENST00000598478 PKD2Q13563 968 aa14.22□□□□□ -0.13
LINC00343-206ENST00000598478 POTEB3A0JP26 581 aa14.21□□□□□ -0.13
LINC00343-206ENST00000598478 STK25O00506 426 aa14.21□□□□□ -0.13
LINC00343-206ENST00000598478 POTEBQ6S5H4 581 aa14.21□□□□□ -0.13
LINC00343-206ENST00000598478 FBXO22Q8NEZ5 403 aa14.2□□□□□ -0.14
LINC00343-206ENST00000598478 KDM6BO15054 1643 aa14.19□□□□□ -0.14
LINC00343-206ENST00000598478 GRIN2AQ12879 1464 aa14.19□□□□□ -0.14
LINC00343-206ENST00000598478 RGL2O15211 777 aa14.18□□□□□ -0.14
LINC00343-206ENST00000598478 HOXB1P14653 301 aaPredicted RBP14.18□□□□□ -0.14
LINC00343-206ENST00000598478 SHROOM2Q13796 1616 aa14.18□□□□□ -0.14
LINC00343-206ENST00000598478 ABCC10Q5T3U5 1492 aa14.18□□□□□ -0.14
LINC00343-206ENST00000598478 SPNS2Q8IVW8 549 aa14.17□□□□□ -0.14
LINC00343-206ENST00000598478 ABCA5Q8WWZ7 1642 aa14.16□□□□□ -0.14
LINC00343-206ENST00000598478 MFRPQ9BY79 579 aa14.16□□□□□ -0.14
LINC00343-206ENST00000598478 RIMBP2O15034 1052 aa14.15□□□□□ -0.14
LINC00343-206ENST00000598478 NUP160Q12769 1436 aa14.15□□□□□ -0.14
LINC00343-206ENST00000598478 TSPOAP1O95153 1857 aa14.14□□□□□ -0.15
LINC00343-206ENST00000598478 DIP2BQ9P265 1576 aa14.14□□□□□ -0.15
LINC00343-206ENST00000598478 MMRN1Q13201 1228 aa14.12□□□□□ -0.15
LINC00343-206ENST00000598478 KRTAP3-3Q9BYR6 98 aa14.11□□□□□ -0.15
LINC00343-206ENST00000598478 KRTAP3-2Q9BYR7 98 aa14.11□□□□□ -0.15
LINC00343-206ENST00000598478 HECW2Q9P2P5 1572 aa14.11□□□□□ -0.15
LINC00343-206ENST00000598478 ADAMTS12P58397 1594 aa14.1□□□□□ -0.15
LINC00343-206ENST00000598478 PRG4Q92954 1404 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms