RNA–Protein interactions for RNA: ENST00000596825.5

ZNF544-208, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-208ENST00000596825 KIF7Q2M1P5 1343 aa16.98■□□□□ 0.31
ZNF544-208ENST00000596825 BCL11AQ9H165 835 aa16.97■□□□□ 0.31
ZNF544-208ENST00000596825 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
ZNF544-208ENST00000596825 PLB1Q6P1J6 1458 aa16.96■□□□□ 0.3
ZNF544-208ENST00000596825 NUTM2DQ5VT03 806 aaPredicted RBP16.95■□□□□ 0.3
ZNF544-208ENST00000596825 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
ZNF544-208ENST00000596825 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
ZNF544-208ENST00000596825 HFM1A2PYH4 1435 aa16.94■□□□□ 0.3
ZNF544-208ENST00000596825 NBR1Q14596 966 aa16.92■□□□□ 0.3
ZNF544-208ENST00000596825 CCDC136Q96JN2 1154 aa16.91■□□□□ 0.3
ZNF544-208ENST00000596825 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
ZNF544-208ENST00000596825 EPRSP07814 1512 aaKnown RBP16.9■□□□□ 0.3
ZNF544-208ENST00000596825 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
ZNF544-208ENST00000596825 MAGI3Q5TCQ9 1506 aa16.88■□□□□ 0.29
ZNF544-208ENST00000596825 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
ZNF544-208ENST00000596825 PLIN1O60240 522 aa16.87■□□□□ 0.29
ZNF544-208ENST00000596825 SKAP1Q86WV1 359 aa16.87■□□□□ 0.29
ZNF544-208ENST00000596825 SAFB2Q14151 953 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■□□□ 12.4
ZNF544-208ENST00000596825 CCDC7Q96M83 1385 aa16.85■□□□□ 0.29
ZNF544-208ENST00000596825 NEUROD2Q15784 382 aa16.85■□□□□ 0.29
ZNF544-208ENST00000596825 AFAP1Q8N556 730 aa16.84■□□□□ 0.29
ZNF544-208ENST00000596825 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
ZNF544-208ENST00000596825 USP47Q96K76 1375 aa16.83■□□□□ 0.28
ZNF544-208ENST00000596825 ABCC5O15440 1437 aa16.81■□□□□ 0.28
ZNF544-208ENST00000596825 SLC24A1O60721 1099 aa16.8■□□□□ 0.28
ZNF544-208ENST00000596825 KDM6BO15054 1643 aa16.8■□□□□ 0.28
ZNF544-208ENST00000596825 CDCA7LQ96GN5 454 aa16.79■□□□□ 0.28
ZNF544-208ENST00000596825 ROCK2O75116 1388 aaKnown RBP16.79■□□□□ 0.28
ZNF544-208ENST00000596825 ANKRD30AQ9BXX3 1397 aa16.79■□□□□ 0.28
ZNF544-208ENST00000596825 EFCAB5A4FU69 1503 aa16.79■□□□□ 0.28
ZNF544-208ENST00000596825 PTPN23Q9H3S7 1636 aa16.78■□□□□ 0.28
ZNF544-208ENST00000596825 DAPK1P53355 1430 aa16.78■□□□□ 0.28
ZNF544-208ENST00000596825 PTPRGP23470 1445 aa16.77■□□□□ 0.28
ZNF544-208ENST00000596825 ANP32EQ9BTT0 268 aa16.77■□□□□ 0.28
ZNF544-208ENST00000596825 KIF21AQ7Z4S6 1674 aa16.77■□□□□ 0.28
ZNF544-208ENST00000596825 GGT6Q6P531 493 aa16.77■□□□□ 0.27
ZNF544-208ENST00000596825 ANKRD30BQ9BXX2 1392 aa16.77■□□□□ 0.27
ZNF544-208ENST00000596825 MRC2Q9UBG0 1479 aa16.76■□□□□ 0.27
ZNF544-208ENST00000596825 CCDC146Q8IYE0 955 aa16.76■□□□□ 0.27
ZNF544-208ENST00000596825 AKNAQ7Z591 1439 aa16.76■□□□□ 0.27
ZNF544-208ENST00000596825 CARMIL2Q6F5E8 1435 aa16.75■□□□□ 0.27
ZNF544-208ENST00000596825 ANKRD50Q9ULJ7 1429 aa16.75■□□□□ 0.27
ZNF544-208ENST00000596825 PANK3Q9H999 370 aa16.75■□□□□ 0.27
ZNF544-208ENST00000596825 PPP4R2Q9NY27 417 aa16.75■□□□□ 0.27
ZNF544-208ENST00000596825 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
ZNF544-208ENST00000596825 KIF3BO15066 747 aa16.74■□□□□ 0.27
ZNF544-208ENST00000596825 KIF15Q9NS87 1388 aa16.73■□□□□ 0.27
ZNF544-208ENST00000596825 IQGAP2Q13576 1575 aa16.73■□□□□ 0.27
ZNF544-208ENST00000596825 MAP3K1Q13233 1512 aa16.73■□□□□ 0.27
ZNF544-208ENST00000596825 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
ZNF544-208ENST00000596825 NUP153P49790 1475 aaKnown RBP16.7■□□□□ 0.26
ZNF544-208ENST00000596825 EHBP1L1Q8N3D4 1523 aa16.7■□□□□ 0.26
ZNF544-208ENST00000596825 SUPT6HQ7KZ85 1726 aaKnown RBP16.7■□□□□ 0.26
ZNF544-208ENST00000596825 MSH5O43196 834 aa16.69■□□□□ 0.26
ZNF544-208ENST00000596825 EXOC6Q8TAG9 804 aa16.69■□□□□ 0.26
ZNF544-208ENST00000596825 CNTLNQ9NXG0 1405 aa16.69■□□□□ 0.26
ZNF544-208ENST00000596825 CUL7Q14999 1698 aa16.67■□□□□ 0.26
ZNF544-208ENST00000596825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.66■□□□□ 0.26
ZNF544-208ENST00000596825 NCOA1Q15788 1441 aa16.66■□□□□ 0.26
ZNF544-208ENST00000596825 UGGT2Q9NYU1 1516 aa16.66■□□□□ 0.26
ZNF544-208ENST00000596825 KNSTRNQ9Y448 316 aa16.66■□□□□ 0.26
ZNF544-208ENST00000596825 STK26Q9P289 416 aa16.65■□□□□ 0.26
ZNF544-208ENST00000596825 KIAA0586Q9BVV6 1533 aa16.65■□□□□ 0.26
ZNF544-208ENST00000596825 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
ZNF544-208ENST00000596825 TROQ12816 1431 aaPredicted RBP16.65■□□□□ 0.26
ZNF544-208ENST00000596825 WDR43Q15061 677 aaKnown RBP eCLIP16.64■□□□□ 0.25
ZNF544-208ENST00000596825 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
ZNF544-208ENST00000596825 RRP7AQ9Y3A4 280 aaKnown RBP16.63■□□□□ 0.25
ZNF544-208ENST00000596825 LAS1LQ9Y4W2 734 aaKnown RBP16.63■□□□□ 0.25
ZNF544-208ENST00000596825 DENND4BO75064 1496 aaPredicted RBP16.63■□□□□ 0.25
ZNF544-208ENST00000596825 CFAP43Q8NDM7 1665 aa16.62■□□□□ 0.25
ZNF544-208ENST00000596825 TRAK1Q9UPV9 953 aa16.62■□□□□ 0.25
ZNF544-208ENST00000596825 MLECQ14165 292 aa16.62■□□□□ 0.25
ZNF544-208ENST00000596825 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
ZNF544-208ENST00000596825 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
ZNF544-208ENST00000596825 CTTNBP2Q8WZ74 1663 aa16.62■□□□□ 0.25
ZNF544-208ENST00000596825 RGS3P49796 1198 aa16.61■□□□□ 0.25
ZNF544-208ENST00000596825 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
ZNF544-208ENST00000596825 CAMSAP2Q08AD1 1489 aa16.61■□□□□ 0.25
ZNF544-208ENST00000596825 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
ZNF544-208ENST00000596825 ZBED9Q6R2W3 1325 aa16.61■□□□□ 0.25
ZNF544-208ENST00000596825 C9orf84Q5VXU9 1444 aa16.61■□□□□ 0.25
ZNF544-208ENST00000596825 DISP1Q96F81 1524 aa16.61■□□□□ 0.25
ZNF544-208ENST00000596825 MIA2Q96PC5 1412 aa16.6■□□□□ 0.25
ZNF544-208ENST00000596825 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
ZNF544-208ENST00000596825 EFCAB2Q5VUJ9 269 aa16.6■□□□□ 0.25
ZNF544-208ENST00000596825 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
ZNF544-208ENST00000596825 HECW1Q76N89 1606 aa16.59■□□□□ 0.25
ZNF544-208ENST00000596825 RCAN3Q9UKA8 241 aa16.59■□□□□ 0.25
ZNF544-208ENST00000596825 CCDC144AA2RUR9 1427 aa16.59■□□□□ 0.25
ZNF544-208ENST00000596825 SPAG9O60271 1321 aaKnown RBP16.58■□□□□ 0.25
ZNF544-208ENST00000596825 NPM1P06748 294 aaKnown RBP eCLIP16.58■□□□□ 0.25
ZNF544-208ENST00000596825 CANXP27824 592 aaKnown RBP16.58■□□□□ 0.25
ZNF544-208ENST00000596825 CFAP70Q5T0N1 1121 aa16.58■□□□□ 0.25
ZNF544-208ENST00000596825 TMF1P82094 1093 aa16.58■□□□□ 0.24
ZNF544-208ENST00000596825 SLC4A3P48751 1232 aa16.57■□□□□ 0.24
ZNF544-208ENST00000596825 KIAA1107Q9UPP5 1409 aa16.57■□□□□ 0.24
ZNF544-208ENST00000596825 ADAMTS8Q9UP79 889 aa16.57■□□□□ 0.24
ZNF544-208ENST00000596825 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
ZNF544-208ENST00000596825 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms