RNA–Protein interactions for RNA: ENST00000595369.1

SH2D3A-203, Transcript of SH2 domain containing 3A, humanhuman

TSL 2

Gene SH2D3A, Length 3,493 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-203ENST00000595369 KIF7Q2M1P5 1343 aa12.32□□□□□ -0.44
SH2D3A-203ENST00000595369 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
SH2D3A-203ENST00000595369 MAGI1Q96QZ7 1491 aaPredicted RBP12.31□□□□□ -0.44
SH2D3A-203ENST00000595369 CTTNBP2Q8WZ74 1663 aa12.31□□□□□ -0.44
SH2D3A-203ENST00000595369 HFM1A2PYH4 1435 aa12.3□□□□□ -0.44
SH2D3A-203ENST00000595369 FBLN2P98095 1184 aa12.29□□□□□ -0.44
SH2D3A-203ENST00000595369 CCDC136Q96JN2 1154 aa12.29□□□□□ -0.44
SH2D3A-203ENST00000595369 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
SH2D3A-203ENST00000595369 CLASP1Q7Z460 1538 aa12.28□□□□□ -0.44
SH2D3A-203ENST00000595369 CCDC7Q96M83 1385 aa12.28□□□□□ -0.44
SH2D3A-203ENST00000595369 KDM6BO15054 1643 aa12.28□□□□□ -0.44
SH2D3A-203ENST00000595369 MYOM3Q5VTT5 1437 aa12.27□□□□□ -0.44
SH2D3A-203ENST00000595369 DENND4BO75064 1496 aaPredicted RBP12.26□□□□□ -0.45
SH2D3A-203ENST00000595369 FYCO1Q9BQS8 1478 aa12.26□□□□□ -0.45
SH2D3A-203ENST00000595369 NOP58Q9Y2X3 529 aaKnown RBP12.26□□□□□ -0.45
SH2D3A-203ENST00000595369 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
SH2D3A-203ENST00000595369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.24□□□□□ -0.45
SH2D3A-203ENST00000595369 RTN4Q9NQC3 1192 aaKnown RBP12.24□□□□□ -0.45
SH2D3A-203ENST00000595369 KDM5BQ9UGL1 1544 aa12.24□□□□□ -0.45
SH2D3A-203ENST00000595369 CHD1O14646 1710 aa12.24□□□□□ -0.45
SH2D3A-203ENST00000595369 ADAMTS12P58397 1594 aa12.23□□□□□ -0.45
SH2D3A-203ENST00000595369 CDK13Q14004 1512 aaKnown RBP12.23□□□□□ -0.45
SH2D3A-203ENST00000595369 MAGI3Q5TCQ9 1506 aa12.23□□□□□ -0.45
SH2D3A-203ENST00000595369 ERICH6BQ5W0A0 696 aa12.23□□□□□ -0.45
SH2D3A-203ENST00000595369 TMC1Q8TDI8 760 aa12.23□□□□□ -0.45
SH2D3A-203ENST00000595369 CFAP43Q8NDM7 1665 aa12.23□□□□□ -0.45
SH2D3A-203ENST00000595369 ZBED9Q6R2W3 1325 aa12.23□□□□□ -0.45
SH2D3A-203ENST00000595369 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
SH2D3A-203ENST00000595369 SAMD9Q5K651 1589 aa12.23□□□□□ -0.45
SH2D3A-203ENST00000595369 CNTLNQ9NXG0 1405 aa12.23□□□□□ -0.45
SH2D3A-203ENST00000595369 PLIN1O60240 522 aa12.22□□□□□ -0.45
SH2D3A-203ENST00000595369 PKD2Q13563 968 aa12.22□□□□□ -0.45
SH2D3A-203ENST00000595369 RGL3Q3MIN7 710 aa12.22□□□□□ -0.45
SH2D3A-203ENST00000595369 LAS1LQ9Y4W2 734 aaKnown RBP12.22□□□□□ -0.45
SH2D3A-203ENST00000595369 EXOC6Q8TAG9 804 aa12.19□□□□□ -0.46
SH2D3A-203ENST00000595369 ST20-MTHFSA0A0A6YYL1 179 aa12.18□□□□□ -0.46
SH2D3A-203ENST00000595369 CDCA7LQ96GN5 454 aa12.18□□□□□ -0.46
SH2D3A-203ENST00000595369 GRIN2BQ13224 1484 aa12.18□□□□□ -0.46
SH2D3A-203ENST00000595369 CARD11Q9BXL7 1154 aa12.17□□□□□ -0.46
SH2D3A-203ENST00000595369 CFDP1Q9UEE9 299 aaPredicted RBP12.17□□□□□ -0.46
SH2D3A-203ENST00000595369 GAPVD1Q14C86 1478 aa12.17□□□□□ -0.46
SH2D3A-203ENST00000595369 DCAF11Q8TEB1 546 aa12.17□□□□□ -0.46
SH2D3A-203ENST00000595369 ANP32AP39687 249 aaKnown RBP12.16□□□□□ -0.46
SH2D3A-203ENST00000595369 CC2D1BQ5T0F9 858 aaKnown RBP12.16□□□□□ -0.46
SH2D3A-203ENST00000595369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
SH2D3A-203ENST00000595369 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
SH2D3A-203ENST00000595369 SLC4A3P48751 1232 aa12.15□□□□□ -0.46
SH2D3A-203ENST00000595369 ZBTB47Q9UFB7 747 aaPredicted RBP12.15□□□□□ -0.46
SH2D3A-203ENST00000595369 NUDCQ9Y266 331 aa12.15□□□□□ -0.46
SH2D3A-203ENST00000595369 NCOA1Q15788 1441 aa12.15□□□□□ -0.46
SH2D3A-203ENST00000595369 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
SH2D3A-203ENST00000595369 IPO9Q96P70 1041 aaKnown RBP12.14□□□□□ -0.47
SH2D3A-203ENST00000595369 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
SH2D3A-203ENST00000595369 RTL5Q5HYW3 569 aaPredicted RBP12.13□□□□□ -0.47
SH2D3A-203ENST00000595369 USP47Q96K76 1375 aa12.13□□□□□ -0.47
SH2D3A-203ENST00000595369 LRRIQ1Q96JM4 1722 aa12.13□□□□□ -0.47
SH2D3A-203ENST00000595369 PNISRQ8TF01 805 aaKnown RBP12.13□□□□□ -0.47
SH2D3A-203ENST00000595369 ADCY10Q96PN6 1610 aa12.13□□□□□ -0.47
SH2D3A-203ENST00000595369 EFCAB5A4FU69 1503 aa12.11□□□□□ -0.47
SH2D3A-203ENST00000595369 BCORL1Q5H9F3 1711 aa12.11□□□□□ -0.47
SH2D3A-203ENST00000595369 HNRNPMP52272 730 aaKnown RBP eCLIP12.1□□□□□ -0.47
SH2D3A-203ENST00000595369 NBPF1Q3BBV0 1214 aa12.1□□□□□ -0.47
SH2D3A-203ENST00000595369 IL27Q8NEV9 243 aa12.1□□□□□ -0.47
SH2D3A-203ENST00000595369 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
SH2D3A-203ENST00000595369 PRG4Q92954 1404 aaPredicted RBP12.1□□□□□ -0.47
SH2D3A-203ENST00000595369 DNAJC5Q9H3Z4 198 aa12.09□□□□□ -0.47
SH2D3A-203ENST00000595369 ABCC5O15440 1437 aa12.09□□□□□ -0.47
SH2D3A-203ENST00000595369 NUP160Q12769 1436 aa12.09□□□□□ -0.47
SH2D3A-203ENST00000595369 EPRSP07814 1512 aaKnown RBP12.09□□□□□ -0.47
SH2D3A-203ENST00000595369 DHX29Q7Z478 1369 aaKnown RBP12.08□□□□□ -0.47
SH2D3A-203ENST00000595369 UGGT2Q9NYU1 1516 aa12.08□□□□□ -0.48
SH2D3A-203ENST00000595369 SMG6Q86US8 1419 aaKnown RBP12.06□□□□□ -0.48
SH2D3A-203ENST00000595369 NUP155O75694 1391 aa12.06□□□□□ -0.48
SH2D3A-203ENST00000595369 DAPK1P53355 1430 aa12.06□□□□□ -0.48
SH2D3A-203ENST00000595369 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
SH2D3A-203ENST00000595369 C20orf194Q5TEA3 1177 aa12.06□□□□□ -0.48
SH2D3A-203ENST00000595369 SPATA31E1Q6ZUB1 1445 aa12.05□□□□□ -0.48
SH2D3A-203ENST00000595369 RCAN3Q9UKA8 241 aa12.05□□□□□ -0.48
SH2D3A-203ENST00000595369 RPRD2Q5VT52 1461 aaKnown RBP12.04□□□□□ -0.48
SH2D3A-203ENST00000595369 ZNF608Q9ULD9 1512 aaPredicted RBP12.04□□□□□ -0.48
SH2D3A-203ENST00000595369 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
SH2D3A-203ENST00000595369 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
SH2D3A-203ENST00000595369 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
SH2D3A-203ENST00000595369 EHBP1L1Q8N3D4 1523 aa12.03□□□□□ -0.48
SH2D3A-203ENST00000595369 NEFMP07197 916 aa12.03□□□□□ -0.48
SH2D3A-203ENST00000595369 RRP1P56182 461 aaKnown RBP12.03□□□□□ -0.48
SH2D3A-203ENST00000595369 PDE4AP27815 886 aa12.03□□□□□ -0.48
SH2D3A-203ENST00000595369 TEX14Q8IWB6 1497 aa12.02□□□□□ -0.49
SH2D3A-203ENST00000595369 CHMP7Q8WUX9 453 aaPredicted RBP12.02□□□□□ -0.49
SH2D3A-203ENST00000595369 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
SH2D3A-203ENST00000595369 RNF123Q5XPI4 1314 aa12.01□□□□□ -0.49
SH2D3A-203ENST00000595369 CRBNQ96SW2 442 aa12.01□□□□□ -0.49
SH2D3A-203ENST00000595369 GRIN2AQ12879 1464 aa11.99□□□□□ -0.49
SH2D3A-203ENST00000595369 PRKCSHP14314 528 aaPredicted RBP11.99□□□□□ -0.49
SH2D3A-203ENST00000595369 RGS3P49796 1198 aa11.99□□□□□ -0.49
SH2D3A-203ENST00000595369 PANK3Q9H999 370 aa11.98□□□□□ -0.49
SH2D3A-203ENST00000595369 TSPY4P0CV99 314 aa11.98□□□□□ -0.49
SH2D3A-203ENST00000595369 TSPY10P0CW01 314 aa11.98□□□□□ -0.49
SH2D3A-203ENST00000595369 PLB1Q6P1J6 1458 aa11.98□□□□□ -0.49
SH2D3A-203ENST00000595369 CCDC146Q8IYE0 955 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms