RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 DENND4BO75064 1496 aaPredicted RBP22.67■■□□□ 1.22
SSC5D-203ENST00000588254 CC2D2AQ9P2K1 1620 aa22.67■■□□□ 1.22
SSC5D-203ENST00000588254 ZNF644Q9H582 1327 aaPredicted RBP22.66■■□□□ 1.22
SSC5D-203ENST00000588254 NCOA1Q15788 1441 aa22.66■■□□□ 1.22
SSC5D-203ENST00000588254 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.66■■□□□ 1.22
SSC5D-203ENST00000588254 SNAPC4Q5SXM2 1469 aa22.63■■□□□ 1.21
SSC5D-203ENST00000588254 EXOC6Q8TAG9 804 aa22.63■■□□□ 1.21
SSC5D-203ENST00000588254 FANCD2Q9BXW9 1451 aa22.62■■□□□ 1.21
SSC5D-203ENST00000588254 NESP48681 1621 aa22.61■■□□□ 1.21
SSC5D-203ENST00000588254 NEFMP07197 916 aa22.61■■□□□ 1.21
SSC5D-203ENST00000588254 KDM2AQ9Y2K7 1162 aa22.6■■□□□ 1.21
SSC5D-203ENST00000588254 ZNF777Q9ULD5 760 aaPredicted RBP22.59■■□□□ 1.21
SSC5D-203ENST00000588254 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.2
SSC5D-203ENST00000588254 EFCAB5A4FU69 1503 aa22.56■■□□□ 1.2
SSC5D-203ENST00000588254 PLIN1O60240 522 aa22.55■■□□□ 1.2
SSC5D-203ENST00000588254 MAGI3Q5TCQ9 1506 aa22.54■■□□□ 1.2
SSC5D-203ENST00000588254 SMG6Q86US8 1419 aaKnown RBP22.53■■□□□ 1.2
SSC5D-203ENST00000588254 SLC4A3P48751 1232 aa22.53■■□□□ 1.2
SSC5D-203ENST00000588254 LRRIQ1Q96JM4 1722 aa22.51■■□□□ 1.19
SSC5D-203ENST00000588254 SUPT6HQ7KZ85 1726 aaKnown RBP22.49■■□□□ 1.19
SSC5D-203ENST00000588254 USP47Q96K76 1375 aa22.49■■□□□ 1.19
SSC5D-203ENST00000588254 PNISRQ8TF01 805 aaKnown RBP22.49■■□□□ 1.19
SSC5D-203ENST00000588254 CDK13Q14004 1512 aaKnown RBP22.48■■□□□ 1.19
SSC5D-203ENST00000588254 PDE4AP27815 886 aa22.48■■□□□ 1.19
SSC5D-203ENST00000588254 ANKRD30BQ9BXX2 1392 aa22.47■■□□□ 1.19
SSC5D-203ENST00000588254 CDCA7LQ96GN5 454 aa22.46■■□□□ 1.19
SSC5D-203ENST00000588254 DHX29Q7Z478 1369 aaKnown RBP22.46■■□□□ 1.19
SSC5D-203ENST00000588254 TOPBP1Q92547 1522 aa22.46■■□□□ 1.19
SSC5D-203ENST00000588254 GRIN2BQ13224 1484 aa22.45■■□□□ 1.19
SSC5D-203ENST00000588254 RRP1P56182 461 aaKnown RBP22.44■■□□□ 1.18
SSC5D-203ENST00000588254 CARD11Q9BXL7 1154 aa22.44■■□□□ 1.18
SSC5D-203ENST00000588254 ABCA10Q8WWZ4 1543 aa22.44■■□□□ 1.18
SSC5D-203ENST00000588254 PKD2Q13563 968 aa22.43■■□□□ 1.18
SSC5D-203ENST00000588254 RCAN3Q9UKA8 241 aa22.43■■□□□ 1.18
SSC5D-203ENST00000588254 CTTNBP2Q8WZ74 1663 aa22.42■■□□□ 1.18
SSC5D-203ENST00000588254 UGGT2Q9NYU1 1516 aa22.42■■□□□ 1.18
SSC5D-203ENST00000588254 EHBP1L1Q8N3D4 1523 aa22.42■■□□□ 1.18
SSC5D-203ENST00000588254 ST20-MTHFSA0A0A6YYL1 179 aa22.4■■□□□ 1.18
SSC5D-203ENST00000588254 RPRD2Q5VT52 1461 aaKnown RBP22.4■■□□□ 1.18
SSC5D-203ENST00000588254 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
SSC5D-203ENST00000588254 BRPF3Q9ULD4 1205 aa22.39■■□□□ 1.18
SSC5D-203ENST00000588254 TEX14Q8IWB6 1497 aa22.38■■□□□ 1.17
SSC5D-203ENST00000588254 HECW1Q76N89 1606 aa22.38■■□□□ 1.17
SSC5D-203ENST00000588254 RNF123Q5XPI4 1314 aa22.37■■□□□ 1.17
SSC5D-203ENST00000588254 CC2D1BQ5T0F9 858 aaKnown RBP22.36■■□□□ 1.17
SSC5D-203ENST00000588254 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
SSC5D-203ENST00000588254 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.16
SSC5D-203ENST00000588254 EIF5BO60841 1220 aaKnown RBP22.32■■□□□ 1.16
SSC5D-203ENST00000588254 DCAF11Q8TEB1 546 aa22.32■■□□□ 1.16
SSC5D-203ENST00000588254 BACH2Q9BYV9 841 aa22.32■■□□□ 1.16
SSC5D-203ENST00000588254 GAPVD1Q14C86 1478 aa22.31■■□□□ 1.16
SSC5D-203ENST00000588254 TCERG1O14776 1098 aaKnown RBP22.3■■□□□ 1.16
SSC5D-203ENST00000588254 RGL3Q3MIN7 710 aa22.3■■□□□ 1.16
SSC5D-203ENST00000588254 CRBNQ96SW2 442 aa22.3■■□□□ 1.16
SSC5D-203ENST00000588254 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
SSC5D-203ENST00000588254 EPRSP07814 1512 aaKnown RBP22.3■■□□□ 1.16
SSC5D-203ENST00000588254 DAPK1P53355 1430 aa22.3■■□□□ 1.16
SSC5D-203ENST00000588254 BCORL1Q5H9F3 1711 aa22.29■■□□□ 1.16
SSC5D-203ENST00000588254 CFDP1Q9UEE9 299 aaPredicted RBP22.29■■□□□ 1.16
SSC5D-203ENST00000588254 GCC2Q8IWJ2 1684 aa22.29■■□□□ 1.16
SSC5D-203ENST00000588254 CUL7Q14999 1698 aa22.28■■□□□ 1.16
SSC5D-203ENST00000588254 C20orf194Q5TEA3 1177 aa22.28■■□□□ 1.16
SSC5D-203ENST00000588254 ABCC5O15440 1437 aa22.27■■□□□ 1.16
SSC5D-203ENST00000588254 DAXXQ9UER7 740 aaPredicted RBP22.27■■□□□ 1.16
SSC5D-203ENST00000588254 SAMD9Q5K651 1589 aa22.25■■□□□ 1.15
SSC5D-203ENST00000588254 TCOF1Q13428 1488 aaKnown RBP22.25■■□□□ 1.15
SSC5D-203ENST00000588254 MYBBP1AQ9BQG0 1328 aaKnown RBP22.24■■□□□ 1.15
SSC5D-203ENST00000588254 RGS3P49796 1198 aa22.24■■□□□ 1.15
SSC5D-203ENST00000588254 URB2Q14146 1524 aaKnown RBP22.22■■□□□ 1.15
SSC5D-203ENST00000588254 KIF15Q9NS87 1388 aa22.22■■□□□ 1.15
SSC5D-203ENST00000588254 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
SSC5D-203ENST00000588254 ARXQ96QS3 562 aa22.2■■□□□ 1.14
SSC5D-203ENST00000588254 PDS5BQ9NTI5 1447 aa22.19■■□□□ 1.14
SSC5D-203ENST00000588254 NFKBIBQ15653 356 aa22.19■■□□□ 1.14
SSC5D-203ENST00000588254 MIA2Q96PC5 1412 aa22.19■■□□□ 1.14
SSC5D-203ENST00000588254 PPM1GO15355 546 aaPredicted RBP22.18■■□□□ 1.14
SSC5D-203ENST00000588254 FRAT1Q92837 279 aaPredicted RBP22.17■■□□□ 1.14
SSC5D-203ENST00000588254 NUP155O75694 1391 aa22.17■■□□□ 1.14
SSC5D-203ENST00000588254 PZPP20742 1482 aa22.16■■□□□ 1.14
SSC5D-203ENST00000588254 NBPF1Q3BBV0 1214 aa22.15■■□□□ 1.14
SSC5D-203ENST00000588254 GSE1Q14687 1217 aa22.14■■□□□ 1.14
SSC5D-203ENST00000588254 NLRP13Q86W25 1043 aa22.14■■□□□ 1.13
SSC5D-203ENST00000588254 ROCK2O75116 1388 aaKnown RBP22.13■■□□□ 1.13
SSC5D-203ENST00000588254 PRG4Q92954 1404 aaPredicted RBP22.13■■□□□ 1.13
SSC5D-203ENST00000588254 FBLN2P98095 1184 aa22.12■■□□□ 1.13
SSC5D-203ENST00000588254 RALBP1Q15311 655 aa22.12■■□□□ 1.13
SSC5D-203ENST00000588254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.12■■□□□ 1.13
SSC5D-203ENST00000588254 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
SSC5D-203ENST00000588254 BRD4O60885 1362 aaPredicted RBP22.11■■□□□ 1.13
SSC5D-203ENST00000588254 LRPPRCP42704 1394 aaKnown RBP22.11■■□□□ 1.13
SSC5D-203ENST00000588254 KIAA1107Q9UPP5 1409 aa22.11■■□□□ 1.13
SSC5D-203ENST00000588254 FRAT2O75474 233 aaPredicted RBP22.1■■□□□ 1.13
SSC5D-203ENST00000588254 KTN1Q86UP2 1357 aaKnown RBP22.1■■□□□ 1.13
SSC5D-203ENST00000588254 USP35Q9P2H5 1018 aa22.09■■□□□ 1.13
SSC5D-203ENST00000588254 ROCK1Q13464 1354 aa22.08■■□□□ 1.13
SSC5D-203ENST00000588254 ABCA5Q8WWZ7 1642 aa22.08■■□□□ 1.12
SSC5D-203ENST00000588254 MS4A1P11836 297 aa22.08■■□□□ 1.12
SSC5D-203ENST00000588254 DDRGK1Q96HY6 314 aa22.06■■□□□ 1.12
SSC5D-203ENST00000588254 PANK3Q9H999 370 aa22.06■■□□□ 1.12
SSC5D-203ENST00000588254 KDM5CP41229 1560 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms