RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 ARHGEF40Q8TER5 1519 aa14.2□□□□□ -0.14
SLC46A1-201ENST00000578217 CTTNBP2Q8WZ74 1663 aa14.18□□□□□ -0.14
SLC46A1-201ENST00000578217 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
SLC46A1-201ENST00000578217 PHLDB1Q86UU1 1377 aa14.18□□□□□ -0.14
SLC46A1-201ENST00000578217 NEO1Q92859 1461 aa14.18□□□□□ -0.14
SLC46A1-201ENST00000578217 GOLGA3Q08378 1498 aa14.15□□□□□ -0.14
SLC46A1-201ENST00000578217 RICTORQ6R327 1708 aa14.15□□□□□ -0.14
SLC46A1-201ENST00000578217 YEATS2Q9ULM3 1422 aa14.15□□□□□ -0.14
SLC46A1-201ENST00000578217 STRCQ7RTU9 1775 aa14.14□□□□□ -0.15
SLC46A1-201ENST00000578217 P3H3Q8IVL6 736 aa14.14□□□□□ -0.15
SLC46A1-201ENST00000578217 MLECQ14165 292 aa14.12□□□□□ -0.15
SLC46A1-201ENST00000578217 FHOD3Q2V2M9 1422 aa14.09□□□□□ -0.15
SLC46A1-201ENST00000578217 CEBPAP49715 358 aaPredicted RBP14.09□□□□□ -0.15
SLC46A1-201ENST00000578217 DENND4BO75064 1496 aaPredicted RBP14.09□□□□□ -0.15
SLC46A1-201ENST00000578217 FER1L4A9Z1Z3 1794 aa14.09□□□□□ -0.15
SLC46A1-201ENST00000578217 TTC37Q6PGP7 1564 aa14.09□□□□□ -0.15
SLC46A1-201ENST00000578217 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
SLC46A1-201ENST00000578217 FANCAO15360 1455 aa14.07□□□□□ -0.16
SLC46A1-201ENST00000578217 AKNAQ7Z591 1439 aa14.07□□□□□ -0.16
SLC46A1-201ENST00000578217 ZMYM4Q5VZL5 1548 aa14.05□□□□□ -0.16
SLC46A1-201ENST00000578217 ZFYVE16Q7Z3T8 1539 aa14.05□□□□□ -0.16
SLC46A1-201ENST00000578217 PREX1Q8TCU6 1659 aa14.04□□□□□ -0.16
SLC46A1-201ENST00000578217 POGZQ7Z3K3 1410 aa14.04□□□□□ -0.16
SLC46A1-201ENST00000578217 LTBP4Q8N2S1 1624 aa14.04□□□□□ -0.16
SLC46A1-201ENST00000578217 NUP153P49790 1475 aaKnown RBP14.03□□□□□ -0.16
SLC46A1-201ENST00000578217 PRXQ9BXM0 1461 aa14.03□□□□□ -0.16
SLC46A1-201ENST00000578217 ARHGEF12Q9NZN5 1544 aa14.03□□□□□ -0.16
SLC46A1-201ENST00000578217 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
SLC46A1-201ENST00000578217 HECW1Q76N89 1606 aa14.02□□□□□ -0.16
SLC46A1-201ENST00000578217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
SLC46A1-201ENST00000578217 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
SLC46A1-201ENST00000578217 EFCAB5A4FU69 1503 aa14□□□□□ -0.17
SLC46A1-201ENST00000578217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14□□□□□ -0.17
SLC46A1-201ENST00000578217 SAMD9Q5K651 1589 aa13.98□□□□□ -0.17
SLC46A1-201ENST00000578217 PTPRTO14522 1441 aa13.97□□□□□ -0.17
SLC46A1-201ENST00000578217 MAGI2Q86UL8 1455 aa13.95□□□□□ -0.18
SLC46A1-201ENST00000578217 ATP10AO60312 1499 aa13.94□□□□□ -0.18
SLC46A1-201ENST00000578217 UHRF1BP1Q6BDS2 1440 aa13.94□□□□□ -0.18
SLC46A1-201ENST00000578217 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
SLC46A1-201ENST00000578217 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
SLC46A1-201ENST00000578217 CFAP74Q9C0B2 1584 aa13.93□□□□□ -0.18
SLC46A1-201ENST00000578217 POTEHQ6S545 545 aa13.93□□□□□ -0.18
SLC46A1-201ENST00000578217 C9orf84Q5VXU9 1444 aa13.91□□□□□ -0.18
SLC46A1-201ENST00000578217 PLEKHD1A6NEE1 506 aa13.9□□□□□ -0.18
SLC46A1-201ENST00000578217 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
SLC46A1-201ENST00000578217 C3P01024 1663 aa13.89□□□□□ -0.19
SLC46A1-201ENST00000578217 IQSEC2Q5JU85 1478 aa13.89□□□□□ -0.19
SLC46A1-201ENST00000578217 RANGAP1P46060 587 aaPredicted RBP13.89□□□□□ -0.19
SLC46A1-201ENST00000578217 NCOA1Q15788 1441 aa13.89□□□□□ -0.19
SLC46A1-201ENST00000578217 ZNF335Q9H4Z2 1342 aaPredicted RBP13.88□□□□□ -0.19
SLC46A1-201ENST00000578217 CDK13Q14004 1512 aaKnown RBP13.87□□□□□ -0.19
SLC46A1-201ENST00000578217 UBAP1LF5GYI3 381 aa13.86□□□□□ -0.19
SLC46A1-201ENST00000578217 PLCH2O75038 1416 aa13.86□□□□□ -0.19
SLC46A1-201ENST00000578217 FAM9AQ8IZU1 332 aaPredicted RBP13.85□□□□□ -0.19
SLC46A1-201ENST00000578217 AFAP1Q8N556 730 aa13.85□□□□□ -0.19
SLC46A1-201ENST00000578217 MED1Q15648 1581 aaPredicted RBP13.84□□□□□ -0.19
SLC46A1-201ENST00000578217 DSG3P32926 999 aa13.84□□□□□ -0.19
SLC46A1-201ENST00000578217 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
SLC46A1-201ENST00000578217 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.19
SLC46A1-201ENST00000578217 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
SLC46A1-201ENST00000578217 TRAPPC8Q9Y2L5 1435 aa13.81□□□□□ -0.2
SLC46A1-201ENST00000578217 HSPA1LP34931 641 aa13.81□□□□□ -0.2
SLC46A1-201ENST00000578217 CAMSAP1Q5T5Y3 1602 aa13.81□□□□□ -0.2
SLC46A1-201ENST00000578217 ABCA6Q8N139 1617 aa13.81□□□□□ -0.2
SLC46A1-201ENST00000578217 KDM5CP41229 1560 aa13.8□□□□□ -0.2
SLC46A1-201ENST00000578217 ATF5Q9Y2D1 282 aaPredicted RBP13.8□□□□□ -0.2
SLC46A1-201ENST00000578217 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
SLC46A1-201ENST00000578217 APLP2Q06481 763 aa13.78□□□□□ -0.2
SLC46A1-201ENST00000578217 KIF14Q15058 1648 aa13.78□□□□□ -0.2
SLC46A1-201ENST00000578217 EFCAB2Q5VUJ9 269 aa13.77□□□□□ -0.21
SLC46A1-201ENST00000578217 ZNF518AQ6AHZ1 1483 aa13.77□□□□□ -0.21
SLC46A1-201ENST00000578217 MYO5CQ9NQX4 1742 aa13.76□□□□□ -0.21
SLC46A1-201ENST00000578217 REREQ9P2R6 1566 aa13.76□□□□□ -0.21
SLC46A1-201ENST00000578217 CAPN15O75808 1086 aa13.76□□□□□ -0.21
SLC46A1-201ENST00000578217 AGLP35573 1532 aa13.74□□□□□ -0.21
SLC46A1-201ENST00000578217 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
SLC46A1-201ENST00000578217 MYT1LQ9UL68 1186 aa13.72□□□□□ -0.21
SLC46A1-201ENST00000578217 ARHGAP5Q13017 1502 aa13.71□□□□□ -0.21
SLC46A1-201ENST00000578217 MLH3Q9UHC1 1453 aa13.71□□□□□ -0.21
SLC46A1-201ENST00000578217 TCOF1Q13428 1488 aaKnown RBP13.7□□□□□ -0.22
SLC46A1-201ENST00000578217 ALKQ9UM73 1620 aa13.7□□□□□ -0.22
SLC46A1-201ENST00000578217 KIDINS220Q9ULH0 1771 aa13.69□□□□□ -0.22
SLC46A1-201ENST00000578217 NPATQ14207 1427 aa13.69□□□□□ -0.22
SLC46A1-201ENST00000578217 CDC42BPBQ9Y5S2 1711 aa13.68□□□□□ -0.22
SLC46A1-201ENST00000578217 ZMYM3Q14202 1370 aa13.68□□□□□ -0.22
SLC46A1-201ENST00000578217 CNTLNQ9NXG0 1405 aa13.67□□□□□ -0.22
SLC46A1-201ENST00000578217 ESF1Q9H501 851 aaKnown RBP13.67□□□□□ -0.22
SLC46A1-201ENST00000578217 MYO3AQ8NEV4 1616 aa13.67□□□□□ -0.22
SLC46A1-201ENST00000578217 PLA2R1Q13018 1463 aa13.67□□□□□ -0.22
SLC46A1-201ENST00000578217 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
SLC46A1-201ENST00000578217 MROH2AA6NES4 1674 aa13.66□□□□□ -0.22
SLC46A1-201ENST00000578217 ABCC1P33527 1531 aa13.65□□□□□ -0.22
SLC46A1-201ENST00000578217 ATP1B4Q9UN42 357 aaPredicted RBP13.65□□□□□ -0.22
SLC46A1-201ENST00000578217 CEP170BQ9Y4F5 1589 aaPredicted RBP13.65□□□□□ -0.22
SLC46A1-201ENST00000578217 PKD2Q13563 968 aa13.64□□□□□ -0.23
SLC46A1-201ENST00000578217 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
SLC46A1-201ENST00000578217 RGS17Q9UGC6 210 aaPredicted RBP13.64□□□□□ -0.23
SLC46A1-201ENST00000578217 LRRIQ1Q96JM4 1722 aa13.64□□□□□ -0.23
SLC46A1-201ENST00000578217 TROQ12816 1431 aaPredicted RBP13.64□□□□□ -0.23
SLC46A1-201ENST00000578217 PTPRKQ15262 1439 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms