RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 PPP4R2Q9NY27 417 aa18.47■□□□□ 0.55
NDEL1-204ENST00000578172 DNMBPQ6XZF7 1577 aa18.47■□□□□ 0.55
NDEL1-204ENST00000578172 ST20-MTHFSA0A0A6YYL1 179 aa18.45■□□□□ 0.54
NDEL1-204ENST00000578172 NUP155O75694 1391 aa18.44■□□□□ 0.54
NDEL1-204ENST00000578172 CCDC7Q96M83 1385 aa18.43■□□□□ 0.54
NDEL1-204ENST00000578172 MSH5O43196 834 aa18.43■□□□□ 0.54
NDEL1-204ENST00000578172 PRG4Q92954 1404 aaPredicted RBP18.41■□□□□ 0.54
NDEL1-204ENST00000578172 PRDM2Q13029 1718 aa18.41■□□□□ 0.54
NDEL1-204ENST00000578172 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
NDEL1-204ENST00000578172 PTPN23Q9H3S7 1636 aa18.38■□□□□ 0.53
NDEL1-204ENST00000578172 ERCC6Q03468 1493 aa18.38■□□□□ 0.53
NDEL1-204ENST00000578172 MAP3K1Q13233 1512 aa18.37■□□□□ 0.53
NDEL1-204ENST00000578172 EFCAB5A4FU69 1503 aa18.37■□□□□ 0.53
NDEL1-204ENST00000578172 SNAPC4Q5SXM2 1469 aa18.36■□□□□ 0.53
NDEL1-204ENST00000578172 AKNAQ7Z591 1439 aa18.36■□□□□ 0.53
NDEL1-204ENST00000578172 ZNF608Q9ULD9 1512 aaPredicted RBP18.35■□□□□ 0.53
NDEL1-204ENST00000578172 USP47Q96K76 1375 aa18.35■□□□□ 0.53
NDEL1-204ENST00000578172 PLIN1O60240 522 aa18.34■□□□□ 0.53
NDEL1-204ENST00000578172 CHGAP10645 457 aaKnown RBP18.34■□□□□ 0.53
NDEL1-204ENST00000578172 CNTLNQ9NXG0 1405 aa18.34■□□□□ 0.53
NDEL1-204ENST00000578172 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.53
NDEL1-204ENST00000578172 SKAP1Q86WV1 359 aa18.32■□□□□ 0.52
NDEL1-204ENST00000578172 MAGI3Q5TCQ9 1506 aa18.31■□□□□ 0.52
NDEL1-204ENST00000578172 ANP32AP39687 249 aaKnown RBP18.3■□□□□ 0.52
NDEL1-204ENST00000578172 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
NDEL1-204ENST00000578172 NBPF1Q3BBV0 1214 aa18.29■□□□□ 0.52
NDEL1-204ENST00000578172 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
NDEL1-204ENST00000578172 CFAP43Q8NDM7 1665 aa18.28■□□□□ 0.52
NDEL1-204ENST00000578172 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
NDEL1-204ENST00000578172 SUPT6HQ7KZ85 1726 aaKnown RBP18.28■□□□□ 0.52
NDEL1-204ENST00000578172 KDM6BO15054 1643 aa18.27■□□□□ 0.52
NDEL1-204ENST00000578172 EHBP1L1Q8N3D4 1523 aa18.27■□□□□ 0.51
NDEL1-204ENST00000578172 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
NDEL1-204ENST00000578172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.26■□□□□ 0.513e-11■■■■■ 49.1
NDEL1-204ENST00000578172 EIF5BO60841 1220 aaKnown RBP18.26■□□□□ 0.51
NDEL1-204ENST00000578172 TNNT2P45379 298 aaPredicted RBP18.26■□□□□ 0.51
NDEL1-204ENST00000578172 PLB1Q6P1J6 1458 aa18.26■□□□□ 0.51
NDEL1-204ENST00000578172 ROCK2O75116 1388 aaKnown RBP18.25■□□□□ 0.51
NDEL1-204ENST00000578172 CDCA7LQ96GN5 454 aa18.25■□□□□ 0.51
NDEL1-204ENST00000578172 NUDCQ9Y266 331 aa18.25■□□□□ 0.51
NDEL1-204ENST00000578172 DAPK1P53355 1430 aa18.25■□□□□ 0.51
NDEL1-204ENST00000578172 ANKRD30BQ9BXX2 1392 aa18.25■□□□□ 0.51
NDEL1-204ENST00000578172 RTN4Q9NQC3 1192 aaKnown RBP18.25■□□□□ 0.51
NDEL1-204ENST00000578172 EXOC6Q8TAG9 804 aa18.25■□□□□ 0.51
NDEL1-204ENST00000578172 ABCC5O15440 1437 aa18.24■□□□□ 0.51
NDEL1-204ENST00000578172 DAXXQ9UER7 740 aaPredicted RBP18.24■□□□□ 0.51
NDEL1-204ENST00000578172 ANKRD30AQ9BXX3 1397 aa18.23■□□□□ 0.51
NDEL1-204ENST00000578172 PAK3O75914 559 aaPredicted RBP18.22■□□□□ 0.51
NDEL1-204ENST00000578172 ZBTB47Q9UFB7 747 aaPredicted RBP18.22■□□□□ 0.51
NDEL1-204ENST00000578172 NEUROD2Q15784 382 aa18.22■□□□□ 0.51
NDEL1-204ENST00000578172 CUL7Q14999 1698 aa18.21■□□□□ 0.51
NDEL1-204ENST00000578172 NOP58Q9Y2X3 529 aaKnown RBP18.19■□□□□ 0.5
NDEL1-204ENST00000578172 CTTNBP2Q8WZ74 1663 aa18.19■□□□□ 0.5
NDEL1-204ENST00000578172 UGGT2Q9NYU1 1516 aa18.18■□□□□ 0.5
NDEL1-204ENST00000578172 ANKRD50Q9ULJ7 1429 aa18.17■□□□□ 0.5
NDEL1-204ENST00000578172 IQGAP2Q13576 1575 aa18.17■□□□□ 0.5
NDEL1-204ENST00000578172 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
NDEL1-204ENST00000578172 PANK3Q9H999 370 aa18.17■□□□□ 0.5
NDEL1-204ENST00000578172 RCAN3Q9UKA8 241 aa18.16■□□□□ 0.5
NDEL1-204ENST00000578172 WDR43Q15061 677 aaKnown RBP eCLIP18.15■□□□□ 0.5
NDEL1-204ENST00000578172 LAMC3Q9Y6N6 1575 aa18.15■□□□□ 0.5
NDEL1-204ENST00000578172 RGS3P49796 1198 aa18.14■□□□□ 0.49
NDEL1-204ENST00000578172 NCOA1Q15788 1441 aa18.14■□□□□ 0.49
NDEL1-204ENST00000578172 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
NDEL1-204ENST00000578172 DEKP35659 375 aaKnown RBP18.13■□□□□ 0.49
NDEL1-204ENST00000578172 KIF15Q9NS87 1388 aa18.12■□□□□ 0.49
NDEL1-204ENST00000578172 HECW1Q76N89 1606 aa18.12■□□□□ 0.49
NDEL1-204ENST00000578172 SLC4A3P48751 1232 aa18.12■□□□□ 0.49
NDEL1-204ENST00000578172 NUTM2DQ5VT03 806 aaPredicted RBP18.11■□□□□ 0.49
NDEL1-204ENST00000578172 MIA2Q96PC5 1412 aa18.11■□□□□ 0.49
NDEL1-204ENST00000578172 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
NDEL1-204ENST00000578172 CANXP27824 592 aaKnown RBP18.1■□□□□ 0.49
NDEL1-204ENST00000578172 DENND4BO75064 1496 aaPredicted RBP18.1■□□□□ 0.49
NDEL1-204ENST00000578172 KNSTRNQ9Y448 316 aa18.1■□□□□ 0.49
NDEL1-204ENST00000578172 KIF21AQ7Z4S6 1674 aa18.1■□□□□ 0.49
NDEL1-204ENST00000578172 RPRD2Q5VT52 1461 aaKnown RBP18.09■□□□□ 0.49
NDEL1-204ENST00000578172 ARHGEF11O15085 1522 aa18.08■□□□□ 0.49
NDEL1-204ENST00000578172 SAFB2Q14151 953 aaKnown RBP eCLIP18.07■□□□□ 0.48
NDEL1-204ENST00000578172 NUP153P49790 1475 aaKnown RBP18.07■□□□□ 0.48
NDEL1-204ENST00000578172 KIAA1107Q9UPP5 1409 aa18.06■□□□□ 0.48
NDEL1-204ENST00000578172 KTN1Q86UP2 1357 aaKnown RBP18.06■□□□□ 0.48
NDEL1-204ENST00000578172 TROQ12816 1431 aaPredicted RBP18.06■□□□□ 0.48
NDEL1-204ENST00000578172 MYBBP1AQ9BQG0 1328 aaKnown RBP18.06■□□□□ 0.48
NDEL1-204ENST00000578172 CAMSAP2Q08AD1 1489 aa18.06■□□□□ 0.48
NDEL1-204ENST00000578172 MRC2Q9UBG0 1479 aa18.05■□□□□ 0.48
NDEL1-204ENST00000578172 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
NDEL1-204ENST00000578172 RRP1P56182 461 aaKnown RBP18.05■□□□□ 0.48
NDEL1-204ENST00000578172 ARXQ96QS3 562 aa18.05■□□□□ 0.48
NDEL1-204ENST00000578172 NLRP13Q86W25 1043 aa18.04■□□□□ 0.48
NDEL1-204ENST00000578172 CRBNQ96SW2 442 aa18.04■□□□□ 0.48
NDEL1-204ENST00000578172 TMF1P82094 1093 aa18.04■□□□□ 0.48
NDEL1-204ENST00000578172 LRRIQ1Q96JM4 1722 aa18.03■□□□□ 0.48
NDEL1-204ENST00000578172 PTPRGP23470 1445 aa18.03■□□□□ 0.48
NDEL1-204ENST00000578172 AFAP1Q8N556 730 aa18.02■□□□□ 0.48
NDEL1-204ENST00000578172 CCDC144AA2RUR9 1427 aa18.02■□□□□ 0.47
NDEL1-204ENST00000578172 C9orf84Q5VXU9 1444 aa18.02■□□□□ 0.47
NDEL1-204ENST00000578172 SAMD9Q5K651 1589 aa18.01■□□□□ 0.47
NDEL1-204ENST00000578172 RALBP1Q15311 655 aa18.01■□□□□ 0.47
NDEL1-204ENST00000578172 FRAT1Q92837 279 aaPredicted RBP18■□□□□ 0.47
NDEL1-204ENST00000578172 ABCA5Q8WWZ7 1642 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms