RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 WDR97A6NE52 1622 aa14.68□□□□□ -0.06
PCDHGA4-201ENST00000571252 LAS1LQ9Y4W2 734 aaKnown RBP14.68□□□□□ -0.06
PCDHGA4-201ENST00000571252 NCOA2Q15596 1464 aa14.67□□□□□ -0.06
PCDHGA4-201ENST00000571252 PLEKHD1A6NEE1 506 aa14.66□□□□□ -0.06
PCDHGA4-201ENST00000571252 MYOM3Q5VTT5 1437 aa14.66□□□□□ -0.06
PCDHGA4-201ENST00000571252 PPM1GO15355 546 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA4-201ENST00000571252 MAPKBP1O60336 1514 aa14.66□□□□□ -0.06
PCDHGA4-201ENST00000571252 MPHOSPH9Q99550 1183 aa14.65□□□□□ -0.06
PCDHGA4-201ENST00000571252 HSP90AA1P07900 732 aaKnown RBP14.63□□□□□ -0.07
PCDHGA4-201ENST00000571252 ARXQ96QS3 562 aa14.63□□□□□ -0.07
PCDHGA4-201ENST00000571252 PRDM2Q13029 1718 aa14.63□□□□□ -0.07
PCDHGA4-201ENST00000571252 L3MBTL2Q969R5 705 aa14.62□□□□□ -0.07
PCDHGA4-201ENST00000571252 UACAQ9BZF9 1416 aa14.61□□□□□ -0.07
PCDHGA4-201ENST00000571252 CUL7Q14999 1698 aa14.61□□□□□ -0.07
PCDHGA4-201ENST00000571252 LAMC3Q9Y6N6 1575 aa14.6□□□□□ -0.07
PCDHGA4-201ENST00000571252 ZNF644Q9H582 1327 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA4-201ENST00000571252 KNSTRNQ9Y448 316 aa14.59□□□□□ -0.07
PCDHGA4-201ENST00000571252 RTN4Q9NQC3 1192 aaKnown RBP14.58□□□□□ -0.08
PCDHGA4-201ENST00000571252 HFM1A2PYH4 1435 aa14.58□□□□□ -0.08
PCDHGA4-201ENST00000571252 DCAF11Q8TEB1 546 aa14.58□□□□□ -0.08
PCDHGA4-201ENST00000571252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
PCDHGA4-201ENST00000571252 PTPRKQ15262 1439 aa14.57□□□□□ -0.08
PCDHGA4-201ENST00000571252 CC2D1BQ5T0F9 858 aaKnown RBP14.57□□□□□ -0.08
PCDHGA4-201ENST00000571252 RGS3P49796 1198 aa14.56□□□□□ -0.08
PCDHGA4-201ENST00000571252 BECN1Q14457 450 aa14.56□□□□□ -0.08
PCDHGA4-201ENST00000571252 ANP32BQ92688 251 aaKnown RBP14.56□□□□□ -0.08
PCDHGA4-201ENST00000571252 NAIPQ13075 1403 aa14.56□□□□□ -0.08
PCDHGA4-201ENST00000571252 PKD2Q13563 968 aa14.55□□□□□ -0.08
PCDHGA4-201ENST00000571252 NUDCQ9Y266 331 aa14.54□□□□□ -0.08
PCDHGA4-201ENST00000571252 PRKRIP1Q9H875 184 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA4-201ENST00000571252 CFAP43Q8NDM7 1665 aa14.53□□□□□ -0.08
PCDHGA4-201ENST00000571252 CDCA8Q53HL2 280 aa14.53□□□□□ -0.08
PCDHGA4-201ENST00000571252 CDK13Q14004 1512 aaKnown RBP14.52□□□□□ -0.09
PCDHGA4-201ENST00000571252 SNAPC4Q5SXM2 1469 aa14.51□□□□□ -0.09
PCDHGA4-201ENST00000571252 RCAN3Q9UKA8 241 aa14.51□□□□□ -0.09
PCDHGA4-201ENST00000571252 EHBP1L1Q8N3D4 1523 aa14.51□□□□□ -0.09
PCDHGA4-201ENST00000571252 GRIN2BQ13224 1484 aa14.5□□□□□ -0.09
PCDHGA4-201ENST00000571252 FANCIQ9NVI1 1328 aa14.5□□□□□ -0.09
PCDHGA4-201ENST00000571252 CTTNBP2Q8WZ74 1663 aa14.5□□□□□ -0.09
PCDHGA4-201ENST00000571252 IPO9Q96P70 1041 aaKnown RBP14.5□□□□□ -0.09
PCDHGA4-201ENST00000571252 SUPT6HQ7KZ85 1726 aaKnown RBP14.49□□□□□ -0.09
PCDHGA4-201ENST00000571252 JPH4Q96JJ6 628 aa14.49□□□□□ -0.09
PCDHGA4-201ENST00000571252 TCERG1O14776 1098 aaKnown RBP14.48□□□□□ -0.09
PCDHGA4-201ENST00000571252 EPRSP07814 1512 aaKnown RBP14.48□□□□□ -0.09
PCDHGA4-201ENST00000571252 NEUROD2Q15784 382 aa14.47□□□□□ -0.09
PCDHGA4-201ENST00000571252 ZBED9Q6R2W3 1325 aa14.47□□□□□ -0.09
PCDHGA4-201ENST00000571252 TMF1P82094 1093 aa14.47□□□□□ -0.09
PCDHGA4-201ENST00000571252 WASHC2AQ641Q2 1341 aa14.47□□□□□ -0.09
PCDHGA4-201ENST00000571252 MRC2Q9UBG0 1479 aa14.46□□□□□ -0.09
PCDHGA4-201ENST00000571252 RALBP1Q15311 655 aa14.46□□□□□ -0.1
PCDHGA4-201ENST00000571252 GLIPR1L2Q4G1C9 344 aa14.46□□□□□ -0.1
PCDHGA4-201ENST00000571252 PTPN23Q9H3S7 1636 aa14.45□□□□□ -0.1
PCDHGA4-201ENST00000571252 IQGAP2Q13576 1575 aa14.45□□□□□ -0.1
PCDHGA4-201ENST00000571252 KTN1Q86UP2 1357 aaKnown RBP14.45□□□□□ -0.1
PCDHGA4-201ENST00000571252 ZNF608Q9ULD9 1512 aaPredicted RBP14.44□□□□□ -0.1
PCDHGA4-201ENST00000571252 FRAT1Q92837 279 aaPredicted RBP14.43□□□□□ -0.1
PCDHGA4-201ENST00000571252 HECW1Q76N89 1606 aa14.43□□□□□ -0.1
PCDHGA4-201ENST00000571252 CARMIL2Q6F5E8 1435 aa14.43□□□□□ -0.1
PCDHGA4-201ENST00000571252 NUP155O75694 1391 aa14.42□□□□□ -0.1
PCDHGA4-201ENST00000571252 HNRNPMP52272 730 aaKnown RBP eCLIP14.41□□□□□ -0.1
PCDHGA4-201ENST00000571252 NBPF8Q3BBV2 869 aa14.41□□□□□ -0.1
PCDHGA4-201ENST00000571252 CFAP53Q96M91 514 aa14.41□□□□□ -0.1
PCDHGA4-201ENST00000571252 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
PCDHGA4-201ENST00000571252 PRG4Q92954 1404 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA4-201ENST00000571252 MIA2Q96PC5 1412 aa14.4□□□□□ -0.1
PCDHGA4-201ENST00000571252 NLRP13Q86W25 1043 aa14.4□□□□□ -0.1
PCDHGA4-201ENST00000571252 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
PCDHGA4-201ENST00000571252 ANKRD30AQ9BXX3 1397 aa14.39□□□□□ -0.11
PCDHGA4-201ENST00000571252 ROCK2O75116 1388 aaKnown RBP14.38□□□□□ -0.11
PCDHGA4-201ENST00000571252 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
PCDHGA4-201ENST00000571252 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
PCDHGA4-201ENST00000571252 UGGT2Q9NYU1 1516 aa14.38□□□□□ -0.11
PCDHGA4-201ENST00000571252 PDE3BQ13370 1112 aa14.37□□□□□ -0.11
PCDHGA4-201ENST00000571252 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
PCDHGA4-201ENST00000571252 TNNT2P45379 298 aaPredicted RBP14.37□□□□□ -0.11
PCDHGA4-201ENST00000571252 CCDC184Q52MB2 194 aa14.37□□□□□ -0.11
PCDHGA4-201ENST00000571252 TRIM44Q96DX7 344 aaPredicted RBP14.37□□□□□ -0.11
PCDHGA4-201ENST00000571252 DAPK1P53355 1430 aa14.36□□□□□ -0.11
PCDHGA4-201ENST00000571252 C11orf95C9JLR9 678 aaPredicted RBP14.36□□□□□ -0.11
PCDHGA4-201ENST00000571252 KIAA0586Q9BVV6 1533 aa14.36□□□□□ -0.11
PCDHGA4-201ENST00000571252 SAMD9Q5K651 1589 aa14.35□□□□□ -0.11
PCDHGA4-201ENST00000571252 ST20-MTHFSA0A0A6YYL1 179 aa14.35□□□□□ -0.11
PCDHGA4-201ENST00000571252 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
PCDHGA4-201ENST00000571252 MYH16Q9H6N6 1097 aa14.35□□□□□ -0.11
PCDHGA4-201ENST00000571252 MAGI3Q5TCQ9 1506 aa14.35□□□□□ -0.11
PCDHGA4-201ENST00000571252 SENP3Q9H4L4 574 aaPredicted RBP14.35□□□□□ -0.11
PCDHGA4-201ENST00000571252 CCDC7Q96M83 1385 aa14.35□□□□□ -0.11
PCDHGA4-201ENST00000571252 KIF7Q2M1P5 1343 aa14.34□□□□□ -0.11
PCDHGA4-201ENST00000571252 EXOC6Q8TAG9 804 aa14.33□□□□□ -0.12
PCDHGA4-201ENST00000571252 KIF15Q9NS87 1388 aa14.33□□□□□ -0.12
PCDHGA4-201ENST00000571252 ABCC5O15440 1437 aa14.33□□□□□ -0.12
PCDHGA4-201ENST00000571252 MYBBP1AQ9BQG0 1328 aaKnown RBP14.33□□□□□ -0.12
PCDHGA4-201ENST00000571252 PDE4AP27815 886 aa14.33□□□□□ -0.12
PCDHGA4-201ENST00000571252 PLB1Q6P1J6 1458 aa14.32□□□□□ -0.12
PCDHGA4-201ENST00000571252 ARID4BQ4LE39 1312 aaPredicted RBP14.32□□□□□ -0.12
PCDHGA4-201ENST00000571252 USP47Q96K76 1375 aa14.32□□□□□ -0.12
PCDHGA4-201ENST00000571252 GOLGA6L22H0YM25 854 aa14.31□□□□□ -0.12
PCDHGA4-201ENST00000571252 CNTLNQ9NXG0 1405 aa14.31□□□□□ -0.12
PCDHGA4-201ENST00000571252 RRP1P56182 461 aaKnown RBP14.31□□□□□ -0.12
PCDHGA4-201ENST00000571252 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms