RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 ARAP1Q96P48 1450 aa10.67□□□□□ -0.7
CDH13-211ENST00000568770 GABBR2O75899 941 aa10.66□□□□□ -0.7
CDH13-211ENST00000568770 CCDC88BA6NC98 1476 aa10.66□□□□□ -0.7
CDH13-211ENST00000568770 TARBP1Q13395 1621 aaKnown RBP10.66□□□□□ -0.7
CDH13-211ENST00000568770 EFCAB3Q8N7B9 438 aa10.65□□□□□ -0.7
CDH13-211ENST00000568770 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.7
CDH13-211ENST00000568770 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.71
CDH13-211ENST00000568770 TTLL13PA6NNM8 815 aa10.64□□□□□ -0.71
CDH13-211ENST00000568770 ABCC8Q09428 1581 aa10.64□□□□□ -0.71
CDH13-211ENST00000568770 AQRO60306 1485 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDH13-211ENST00000568770 HAP1P54257 671 aaPredicted RBP10.63□□□□□ -0.71
CDH13-211ENST00000568770 TIE1P35590 1138 aa10.62□□□□□ -0.71
CDH13-211ENST00000568770 MFRPQ9BY79 579 aa10.62□□□□□ -0.71
CDH13-211ENST00000568770 CLCN6P51797 869 aa10.6□□□□□ -0.71
CDH13-211ENST00000568770 TSHZ2Q9NRE2 1034 aa10.6□□□□□ -0.71
CDH13-211ENST00000568770 PHF8Q9UPP1 1060 aa10.58□□□□□ -0.72
CDH13-211ENST00000568770 ATN1P54259 1190 aaPredicted RBP10.57□□□□□ -0.72
CDH13-211ENST00000568770 POLA1P09884 1462 aaPredicted RBP10.56□□□□□ -0.72
CDH13-211ENST00000568770 ATMINO43313 823 aaPredicted RBP10.56□□□□□ -0.72
CDH13-211ENST00000568770 FBXO22Q8NEZ5 403 aa10.56□□□□□ -0.72
CDH13-211ENST00000568770 TRIM35Q9UPQ4 493 aa10.56□□□□□ -0.72
CDH13-211ENST00000568770 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
CDH13-211ENST00000568770 SOX12O15370 315 aa10.54□□□□□ -0.72
CDH13-211ENST00000568770 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
CDH13-211ENST00000568770 RAD54L2Q9Y4B4 1467 aa10.54□□□□□ -0.72
CDH13-211ENST00000568770 PPP1R37O75864 691 aa10.53□□□□□ -0.72
CDH13-211ENST00000568770 ASTLQ6HA08 431 aaPredicted RBP10.53□□□□□ -0.72
CDH13-211ENST00000568770 MS4A4AQ96JQ5 239 aa10.53□□□□□ -0.72
CDH13-211ENST00000568770 PELP1Q8IZL8 1130 aaKnown RBP10.52□□□□□ -0.73
CDH13-211ENST00000568770 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.73
CDH13-211ENST00000568770 SNAPC4Q5SXM2 1469 aa10.52□□□□□ -0.73
CDH13-211ENST00000568770 SYNJ1O43426 1573 aa10.52□□□□□ -0.73
CDH13-211ENST00000568770 TDRD9Q8NDG6 1382 aaKnown RBP10.52□□□□□ -0.73
CDH13-211ENST00000568770 POTEIP0CG38 1075 aa10.51□□□□□ -0.73
CDH13-211ENST00000568770 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
CDH13-211ENST00000568770 SOGA1O94964 1423 aa10.5□□□□□ -0.73
CDH13-211ENST00000568770 NLRP6P59044 892 aa10.5□□□□□ -0.73
CDH13-211ENST00000568770 GOLGA2Q08379 1002 aa10.5□□□□□ -0.73
CDH13-211ENST00000568770 MKRN3Q13064 507 aaKnown RBP10.5□□□□□ -0.73
CDH13-211ENST00000568770 PBRM1Q86U86 1689 aa10.48□□□□□ -0.73
CDH13-211ENST00000568770 ILDR1Q86SU0 546 aaPredicted RBP10.47□□□□□ -0.73
CDH13-211ENST00000568770 CHMP7Q8WUX9 453 aaPredicted RBP10.47□□□□□ -0.73
CDH13-211ENST00000568770 RYDENQ9NUL5 291 aaKnown RBP10.47□□□□□ -0.73
CDH13-211ENST00000568770 FGD5Q6ZNL6 1462 aa10.47□□□□□ -0.73
CDH13-211ENST00000568770 MAGI1Q96QZ7 1491 aaPredicted RBP10.47□□□□□ -0.73
CDH13-211ENST00000568770 DCBLD2Q96PD2 775 aa10.46□□□□□ -0.73
CDH13-211ENST00000568770 SYNJ2O15056 1496 aa10.45□□□□□ -0.74
CDH13-211ENST00000568770 DPY19L2Q6NUT2 758 aa10.45□□□□□ -0.74
CDH13-211ENST00000568770 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
CDH13-211ENST00000568770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDH13-211ENST00000568770 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
CDH13-211ENST00000568770 GRIN2BQ13224 1484 aa10.43□□□□□ -0.74
CDH13-211ENST00000568770 GAPVD1Q14C86 1478 aa10.43□□□□□ -0.74
CDH13-211ENST00000568770 CUX1P39880 1505 aa10.43□□□□□ -0.74
CDH13-211ENST00000568770 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
CDH13-211ENST00000568770 PDCD7Q8N8D1 485 aaKnown RBP10.41□□□□□ -0.74
CDH13-211ENST00000568770 POTEFA5A3E0 1075 aa10.39□□□□□ -0.75
CDH13-211ENST00000568770 COLQQ9Y215 455 aaPredicted RBP10.39□□□□□ -0.75
CDH13-211ENST00000568770 ERCC6L2Q5T890 1561 aa10.39□□□□□ -0.75
CDH13-211ENST00000568770 KIF13AQ9H1H9 1805 aa10.38□□□□□ -0.75
CDH13-211ENST00000568770 IER5LQ5T953 404 aa10.38□□□□□ -0.75
CDH13-211ENST00000568770 ABCA5Q8WWZ7 1642 aa10.37□□□□□ -0.75
CDH13-211ENST00000568770 OCEL1Q9H607 264 aa10.36□□□□□ -0.75
CDH13-211ENST00000568770 SLC39A7Q92504 469 aa10.33□□□□□ -0.76
CDH13-211ENST00000568770 CEP170Q5SW79 1584 aa10.33□□□□□ -0.76
CDH13-211ENST00000568770 ABCA10Q8WWZ4 1543 aa10.33□□□□□ -0.76
CDH13-211ENST00000568770 GRIN2AQ12879 1464 aa10.32□□□□□ -0.76
CDH13-211ENST00000568770 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
CDH13-211ENST00000568770 SHROOM2Q13796 1616 aa10.32□□□□□ -0.76
CDH13-211ENST00000568770 C7P10643 843 aa10.31□□□□□ -0.76
CDH13-211ENST00000568770 PLCG2P16885 1265 aa10.31□□□□□ -0.76
CDH13-211ENST00000568770 ADAMTS12P58397 1594 aa10.31□□□□□ -0.76
CDH13-211ENST00000568770 SEC24BO95487 1268 aa10.29□□□□□ -0.76
CDH13-211ENST00000568770 NCKAP5LQ9HCH0 1330 aa10.29□□□□□ -0.76
CDH13-211ENST00000568770 NUP160Q12769 1436 aa10.28□□□□□ -0.76
CDH13-211ENST00000568770 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
CDH13-211ENST00000568770 TMEM121BQ9BXQ6 578 aaPredicted RBP10.26□□□□□ -0.77
CDH13-211ENST00000568770 BOLA1Q9Y3E2 137 aa10.26□□□□□ -0.77
CDH13-211ENST00000568770 BIVM-ERCC5R4GMW8 1640 aa10.23□□□□□ -0.77
CDH13-211ENST00000568770 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
CDH13-211ENST00000568770 WRNQ14191 1432 aaPredicted RBP eCLIP10.23□□□□□ -0.77
CDH13-211ENST00000568770 TSPOAP1O95153 1857 aa10.22□□□□□ -0.77
CDH13-211ENST00000568770 FHAD1B1AJZ9 1412 aa10.22□□□□□ -0.77
CDH13-211ENST00000568770 LARP6Q9BRS8 491 aaKnown RBP10.21□□□□□ -0.77
CDH13-211ENST00000568770 PRG4Q92954 1404 aaPredicted RBP10.21□□□□□ -0.78
CDH13-211ENST00000568770 TOP2BQ02880 1626 aa10.21□□□□□ -0.78
CDH13-211ENST00000568770 POTEB2H3BUK9 544 aa10.2□□□□□ -0.78
CDH13-211ENST00000568770 ERICH3Q5RHP9 1530 aa10.2□□□□□ -0.78
CDH13-211ENST00000568770 TMEM92Q6UXU6 159 aa10.2□□□□□ -0.78
CDH13-211ENST00000568770 L3MBTL3Q96JM7 780 aaPredicted RBP10.2□□□□□ -0.78
CDH13-211ENST00000568770 DIP2BQ9P265 1576 aa10.19□□□□□ -0.78
CDH13-211ENST00000568770 ABCC10Q5T3U5 1492 aa10.19□□□□□ -0.78
CDH13-211ENST00000568770 POTEJP0CG39 1038 aa10.19□□□□□ -0.78
CDH13-211ENST00000568770 PDE4AP27815 886 aa10.19□□□□□ -0.78
CDH13-211ENST00000568770 FAM69CQ0P6D2 419 aa10.19□□□□□ -0.78
CDH13-211ENST00000568770 KDM6BO15054 1643 aa10.18□□□□□ -0.78
CDH13-211ENST00000568770 ADCY10Q96PN6 1610 aa10.18□□□□□ -0.78
CDH13-211ENST00000568770 MAPKBP1O60336 1514 aa10.17□□□□□ -0.78
CDH13-211ENST00000568770 WDR70Q9NW82 654 aa10.17□□□□□ -0.78
CDH13-211ENST00000568770 RUSC2Q8N2Y8 1516 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms