RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 EFCAB3Q8N7B9 438 aa10.14□□□□□ -0.79
AC055855.3-201ENST00000564269 ZFP91Q96JP5 570 aaPredicted RBP10.14□□□□□ -0.79
AC055855.3-201ENST00000564269 VGFO15240 615 aaPredicted RBP10.13□□□□□ -0.79
AC055855.3-201ENST00000564269 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.13□□□□□ -0.79
AC055855.3-201ENST00000564269 L3MBTL3Q96JM7 780 aaPredicted RBP10.12□□□□□ -0.79
AC055855.3-201ENST00000564269 ECM2O94769 699 aaPredicted RBP10.1□□□□□ -0.79
AC055855.3-201ENST00000564269 C3orf67Q6ZVT6 689 aa10.1□□□□□ -0.79
AC055855.3-201ENST00000564269 FANCD2Q9BXW9 1451 aa10.1□□□□□ -0.79
AC055855.3-201ENST00000564269 CEP164Q9UPV0 1460 aa10.1□□□□□ -0.79
AC055855.3-201ENST00000564269 WIZO95785 1651 aa10.09□□□□□ -0.79
AC055855.3-201ENST00000564269 PKD2Q13563 968 aa10.09□□□□□ -0.79
AC055855.3-201ENST00000564269 CFTRP13569 1480 aa10.08□□□□□ -0.8
AC055855.3-201ENST00000564269 BOLA1Q9Y3E2 137 aa10.05□□□□□ -0.8
AC055855.3-201ENST00000564269 RGL2O15211 777 aa10.04□□□□□ -0.8
AC055855.3-201ENST00000564269 ST18O60284 1047 aa10.04□□□□□ -0.8
AC055855.3-201ENST00000564269 BCL11BQ9C0K0 894 aaPredicted RBP10.04□□□□□ -0.8
AC055855.3-201ENST00000564269 G3V3G9 751 aa10.03□□□□□ -0.8
AC055855.3-201ENST00000564269 RSF1Q96T23 1441 aaPredicted RBP10.03□□□□□ -0.8
AC055855.3-201ENST00000564269 PHF8Q9UPP1 1060 aa10.02□□□□□ -0.81
AC055855.3-201ENST00000564269 URB2Q14146 1524 aaKnown RBP10.02□□□□□ -0.81
AC055855.3-201ENST00000564269 SOX12O15370 315 aa10.01□□□□□ -0.81
AC055855.3-201ENST00000564269 MS4A4AQ96JQ5 239 aa10.01□□□□□ -0.81
AC055855.3-201ENST00000564269 STK24Q9Y6E0 443 aa10.01□□□□□ -0.81
AC055855.3-201ENST00000564269 TAOK2Q9UL54 1235 aa10□□□□□ -0.81
AC055855.3-201ENST00000564269 STK25O00506 426 aa9.99□□□□□ -0.81
AC055855.3-201ENST00000564269 SNPHO15079 494 aa9.98□□□□□ -0.81
AC055855.3-201ENST00000564269 TMEM121BQ9BXQ6 578 aaPredicted RBP9.98□□□□□ -0.81
AC055855.3-201ENST00000564269 PLSCR2Q9NRY7 297 aa9.98□□□□□ -0.81
AC055855.3-201ENST00000564269 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
AC055855.3-201ENST00000564269 MICALL2Q8IY33 904 aa9.95□□□□□ -0.82
AC055855.3-201ENST00000564269 NLRP6P59044 892 aa9.93□□□□□ -0.82
AC055855.3-201ENST00000564269 FBXO22Q8NEZ5 403 aa9.93□□□□□ -0.82
AC055855.3-201ENST00000564269 ZNF608Q9ULD9 1512 aaPredicted RBP9.92□□□□□ -0.82
AC055855.3-201ENST00000564269 MARVELD3Q96A59 401 aa9.92□□□□□ -0.82
AC055855.3-201ENST00000564269 MFRPQ9BY79 579 aa9.92□□□□□ -0.82
AC055855.3-201ENST00000564269 PCDH10Q9P2E7 1040 aa9.92□□□□□ -0.82
AC055855.3-201ENST00000564269 IFT140Q96RY7 1462 aa9.91□□□□□ -0.82
AC055855.3-201ENST00000564269 CCDC88BA6NC98 1476 aa9.91□□□□□ -0.82
AC055855.3-201ENST00000564269 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
AC055855.3-201ENST00000564269 CDAN1Q8IWY9 1227 aa9.89□□□□□ -0.83
AC055855.3-201ENST00000564269 RIMBP3CA6NJZ7 1639 aa9.89□□□□□ -0.83
AC055855.3-201ENST00000564269 RIMBP3BA6NNM3 1639 aa9.89□□□□□ -0.83
AC055855.3-201ENST00000564269 RIMBP3Q9UFD9 1639 aa9.89□□□□□ -0.83
AC055855.3-201ENST00000564269 ARHGEF11O15085 1522 aa9.88□□□□□ -0.83
AC055855.3-201ENST00000564269 TOPBP1Q92547 1522 aa9.87□□□□□ -0.83
AC055855.3-201ENST00000564269 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
AC055855.3-201ENST00000564269 CYB5RLQ6IPT4 315 aa9.86□□□□□ -0.83
AC055855.3-201ENST00000564269 EMP3P54852 163 aa9.84□□□□□ -0.83
AC055855.3-201ENST00000564269 AQRO60306 1485 aaKnown RBP eCLIP9.84□□□□□ -0.83
AC055855.3-201ENST00000564269 ABCC8Q09428 1581 aa9.84□□□□□ -0.83
AC055855.3-201ENST00000564269 EIF4G3O43432 1585 aaKnown RBP9.8□□□□□ -0.84
AC055855.3-201ENST00000564269 DNMBPQ6XZF7 1577 aa9.8□□□□□ -0.84
AC055855.3-201ENST00000564269 DOK7Q18PE1 504 aa9.8□□□□□ -0.84
AC055855.3-201ENST00000564269 HS6ST3Q8IZP7 471 aa9.8□□□□□ -0.84
AC055855.3-201ENST00000564269 ZNF710Q8N1W2 664 aa9.8□□□□□ -0.84
AC055855.3-201ENST00000564269 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
AC055855.3-201ENST00000564269 ARAP1Q96P48 1450 aa9.79□□□□□ -0.84
AC055855.3-201ENST00000564269 TARBP1Q13395 1621 aaKnown RBP9.78□□□□□ -0.84
AC055855.3-201ENST00000564269 POTEB3A0JP26 581 aa9.78□□□□□ -0.84
AC055855.3-201ENST00000564269 FAM205CA6NFA0 338 aa9.78□□□□□ -0.84
AC055855.3-201ENST00000564269 PPP1R37O75864 691 aa9.78□□□□□ -0.84
AC055855.3-201ENST00000564269 CHGAP10645 457 aaKnown RBP9.78□□□□□ -0.84
AC055855.3-201ENST00000564269 POTEBQ6S5H4 581 aa9.78□□□□□ -0.84
AC055855.3-201ENST00000564269 POLA1P09884 1462 aaPredicted RBP9.78□□□□□ -0.84
AC055855.3-201ENST00000564269 HOXB1P14653 301 aaPredicted RBP9.76□□□□□ -0.85
AC055855.3-201ENST00000564269 HS3ST6Q96QI5 342 aa9.76□□□□□ -0.85
AC055855.3-201ENST00000564269 TDRD9Q8NDG6 1382 aaKnown RBP9.75□□□□□ -0.85
AC055855.3-201ENST00000564269 RAD54L2Q9Y4B4 1467 aa9.75□□□□□ -0.85
AC055855.3-201ENST00000564269 SOGA1O94964 1423 aa9.74□□□□□ -0.85
AC055855.3-201ENST00000564269 RIMBP2O15034 1052 aa9.74□□□□□ -0.85
AC055855.3-201ENST00000564269 C2orf72A6NCS6 295 aa9.73□□□□□ -0.85
AC055855.3-201ENST00000564269 KIF3CO14782 793 aa9.72□□□□□ -0.85
AC055855.3-201ENST00000564269 CHD1O14646 1710 aa9.71□□□□□ -0.85
AC055855.3-201ENST00000564269 CHMP7Q8WUX9 453 aaPredicted RBP9.71□□□□□ -0.86
AC055855.3-201ENST00000564269 NKX1-1Q15270 411 aaPredicted RBP9.7□□□□□ -0.86
AC055855.3-201ENST00000564269 SNAPC4Q5SXM2 1469 aa9.7□□□□□ -0.86
AC055855.3-201ENST00000564269 GPR153Q6NV75 609 aa9.69□□□□□ -0.86
AC055855.3-201ENST00000564269 ZSWIM6Q9HCJ5 1215 aa9.69□□□□□ -0.86
AC055855.3-201ENST00000564269 CLASP1Q7Z460 1538 aa9.68□□□□□ -0.86
AC055855.3-201ENST00000564269 FGD5Q6ZNL6 1462 aa9.68□□□□□ -0.86
AC055855.3-201ENST00000564269 ERBB3P21860 1342 aa9.68□□□□□ -0.86
AC055855.3-201ENST00000564269 ARSIQ5FYB1 569 aa9.67□□□□□ -0.86
AC055855.3-201ENST00000564269 KHSRPQ92945 711 aaKnown RBP eCLIP9.67□□□□□ -0.86
AC055855.3-201ENST00000564269 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
AC055855.3-201ENST00000564269 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
AC055855.3-201ENST00000564269 TMC2Q8TDI7 906 aa9.66□□□□□ -0.86
AC055855.3-201ENST00000564269 GRIN2BQ13224 1484 aa9.66□□□□□ -0.86
AC055855.3-201ENST00000564269 MAGI1Q96QZ7 1491 aaPredicted RBP9.66□□□□□ -0.86
AC055855.3-201ENST00000564269 WDR97A6NE52 1622 aa9.65□□□□□ -0.86
AC055855.3-201ENST00000564269 VARS2Q5ST30 1063 aaKnown RBP9.65□□□□□ -0.86
AC055855.3-201ENST00000564269 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
AC055855.3-201ENST00000564269 CUX1P39880 1505 aa9.65□□□□□ -0.86
AC055855.3-201ENST00000564269 SYNJ2O15056 1496 aa9.65□□□□□ -0.87
AC055855.3-201ENST00000564269 SYNJ1O43426 1573 aa9.63□□□□□ -0.87
AC055855.3-201ENST00000564269 GAPVD1Q14C86 1478 aa9.6□□□□□ -0.87
AC055855.3-201ENST00000564269 MMRN1Q13201 1228 aa9.59□□□□□ -0.87
AC055855.3-201ENST00000564269 ABCA10Q8WWZ4 1543 aa9.57□□□□□ -0.88
AC055855.3-201ENST00000564269 SLC34A2O95436 690 aa9.57□□□□□ -0.88
AC055855.3-201ENST00000564269 NUDT7P0C024 238 aa9.57□□□□□ -0.88
AC055855.3-201ENST00000564269 PCDHGA4Q9Y5G9 962 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms