RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
CFDP1-202ENST00000562602 TMEM106CQ9BVX2 250 aa11.02□□□□□ -0.65
CFDP1-202ENST00000562602 ARAP1Q96P48 1450 aa11.01□□□□□ -0.65
CFDP1-202ENST00000562602 MAP3K1Q13233 1512 aa11.01□□□□□ -0.65
CFDP1-202ENST00000562602 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
CFDP1-202ENST00000562602 GSE1Q14687 1217 aa10.99□□□□□ -0.65
CFDP1-202ENST00000562602 RRBP1Q9P2E9 1410 aaKnown RBP10.99□□□□□ -0.65
CFDP1-202ENST00000562602 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
CFDP1-202ENST00000562602 IER5LQ5T953 404 aa10.98□□□□□ -0.65
CFDP1-202ENST00000562602 CUX2O14529 1486 aa10.96□□□□□ -0.65
CFDP1-202ENST00000562602 IGF1RP08069 1367 aa10.96□□□□□ -0.65
CFDP1-202ENST00000562602 SPOCK2Q92563 424 aa10.95□□□□□ -0.66
CFDP1-202ENST00000562602 FHAD1B1AJZ9 1412 aa10.94□□□□□ -0.66
CFDP1-202ENST00000562602 SEC24BO95487 1268 aa10.94□□□□□ -0.66
CFDP1-202ENST00000562602 IRX5P78411 483 aaPredicted RBP10.94□□□□□ -0.66
CFDP1-202ENST00000562602 MAMSTRQ6ZN01 415 aa10.94□□□□□ -0.66
CFDP1-202ENST00000562602 CARMIL1Q5VZK9 1371 aa10.93□□□□□ -0.66
CFDP1-202ENST00000562602 CCNB3Q8WWL7 1395 aa10.93□□□□□ -0.66
CFDP1-202ENST00000562602 ARHGAP35Q9NRY4 1499 aa10.93□□□□□ -0.66
CFDP1-202ENST00000562602 DNAJC5Q9H3Z4 198 aa10.92□□□□□ -0.66
CFDP1-202ENST00000562602 DHX57Q6P158 1386 aaKnown RBP10.9□□□□□ -0.66
CFDP1-202ENST00000562602 RANGAP1P46060 587 aaPredicted RBP10.9□□□□□ -0.66
CFDP1-202ENST00000562602 NEUROD1Q13562 356 aa10.9□□□□□ -0.66
CFDP1-202ENST00000562602 LCE2DQ5TA82 110 aaPredicted RBP10.89□□□□□ -0.67
CFDP1-202ENST00000562602 SCUBE2Q9NQ36 999 aa10.89□□□□□ -0.67
CFDP1-202ENST00000562602 FGD5Q6ZNL6 1462 aa10.88□□□□□ -0.67
CFDP1-202ENST00000562602 KANK4Q5T7N3 995 aaPredicted RBP10.88□□□□□ -0.67
CFDP1-202ENST00000562602 ZNF467Q7Z7K2 595 aaPredicted RBP10.88□□□□□ -0.67
CFDP1-202ENST00000562602 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
CFDP1-202ENST00000562602 FANCD2Q9BXW9 1451 aa10.87□□□□□ -0.67
CFDP1-202ENST00000562602 CIZ1Q9ULV3 898 aaPredicted RBP10.86□□□□□ -0.67
CFDP1-202ENST00000562602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.86□□□□□ -0.67
CFDP1-202ENST00000562602 DNMBPQ6XZF7 1577 aa10.86□□□□□ -0.67
CFDP1-202ENST00000562602 EFCAB5A4FU69 1503 aa10.85□□□□□ -0.67
CFDP1-202ENST00000562602 ABCA10Q8WWZ4 1543 aa10.85□□□□□ -0.67
CFDP1-202ENST00000562602 AQRO60306 1485 aaKnown RBP eCLIP10.85□□□□□ -0.67
CFDP1-202ENST00000562602 ERCC6Q03468 1493 aa10.85□□□□□ -0.67
CFDP1-202ENST00000562602 TIAM1Q13009 1591 aa10.85□□□□□ -0.67
CFDP1-202ENST00000562602 OCEL1Q9H607 264 aa10.84□□□□□ -0.67
CFDP1-202ENST00000562602 LRRC9Q6ZRR7 1453 aa10.83□□□□□ -0.68
CFDP1-202ENST00000562602 PLCG2P16885 1265 aa10.83□□□□□ -0.68
CFDP1-202ENST00000562602 PSEN1P49768 467 aa10.83□□□□□ -0.68
CFDP1-202ENST00000562602 GTF3C3Q9Y5Q9 886 aa10.83□□□□□ -0.68
CFDP1-202ENST00000562602 CUL7Q14999 1698 aa10.82□□□□□ -0.68
CFDP1-202ENST00000562602 FYCO1Q9BQS8 1478 aa10.81□□□□□ -0.68
CFDP1-202ENST00000562602 POTEMA6NI47 508 aa10.8□□□□□ -0.68
CFDP1-202ENST00000562602 PDCD7Q8N8D1 485 aaKnown RBP10.8□□□□□ -0.68
CFDP1-202ENST00000562602 FMN1Q68DA7 1419 aa10.8□□□□□ -0.68
CFDP1-202ENST00000562602 SETD5Q9C0A6 1442 aa10.8□□□□□ -0.68
CFDP1-202ENST00000562602 NESP48681 1621 aa10.8□□□□□ -0.68
CFDP1-202ENST00000562602 CASKIN1Q8WXD9 1431 aa10.79□□□□□ -0.68
CFDP1-202ENST00000562602 POTEGQ6S5H5 508 aa10.79□□□□□ -0.68
CFDP1-202ENST00000562602 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
CFDP1-202ENST00000562602 FAM163AQ96GL9 167 aaPredicted RBP10.78□□□□□ -0.68
CFDP1-202ENST00000562602 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.68
CFDP1-202ENST00000562602 POLA1P09884 1462 aaPredicted RBP10.76□□□□□ -0.69
CFDP1-202ENST00000562602 PDAP1Q13442 181 aaKnown RBP10.76□□□□□ -0.69
CFDP1-202ENST00000562602 ILDR1Q86SU0 546 aaPredicted RBP10.76□□□□□ -0.69
CFDP1-202ENST00000562602 RAB3GAP2Q9H2M9 1393 aa10.76□□□□□ -0.69
CFDP1-202ENST00000562602 CFAP43Q8NDM7 1665 aa10.76□□□□□ -0.69
CFDP1-202ENST00000562602 PDS5BQ9NTI5 1447 aa10.75□□□□□ -0.69
CFDP1-202ENST00000562602 MYT1Q01538 1121 aa10.74□□□□□ -0.69
CFDP1-202ENST00000562602 SLAIN1Q8ND83 568 aa10.74□□□□□ -0.69
CFDP1-202ENST00000562602 MKRN3Q13064 507 aaKnown RBP10.72□□□□□ -0.69
CFDP1-202ENST00000562602 PHLDB1Q86UU1 1377 aa10.71□□□□□ -0.69
CFDP1-202ENST00000562602 THOC2Q8NI27 1593 aaKnown RBP10.71□□□□□ -0.69
CFDP1-202ENST00000562602 RNF25Q96BH1 459 aaPredicted RBP10.7□□□□□ -0.7
CFDP1-202ENST00000562602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.7□□□□□ -0.73e-12■■□□□ 11.4
CFDP1-202ENST00000562602 PCF11O94913 1555 aaKnown RBP10.69□□□□□ -0.7
CFDP1-202ENST00000562602 RAD54L2Q9Y4B4 1467 aa10.69□□□□□ -0.7
CFDP1-202ENST00000562602 FAM50AQ14320 339 aaKnown RBP10.69□□□□□ -0.7
CFDP1-202ENST00000562602 DPY19L2Q6NUT2 758 aa10.69□□□□□ -0.7
CFDP1-202ENST00000562602 YTHDC1Q96MU7 727 aaKnown RBP10.69□□□□□ -0.7
CFDP1-202ENST00000562602 CABP2Q9NPB3 220 aa10.69□□□□□ -0.7
CFDP1-202ENST00000562602 ITGAEP38570 1179 aa10.68□□□□□ -0.7
CFDP1-202ENST00000562602 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
CFDP1-202ENST00000562602 CTTNBP2Q8WZ74 1663 aa10.68□□□□□ -0.7
CFDP1-202ENST00000562602 FHOD3Q2V2M9 1422 aa10.67□□□□□ -0.7
CFDP1-202ENST00000562602 MAPKBP1O60336 1514 aa10.67□□□□□ -0.7
CFDP1-202ENST00000562602 GAPVD1Q14C86 1478 aa10.67□□□□□ -0.7
CFDP1-202ENST00000562602 MTUS2Q5JR59 1369 aa10.66□□□□□ -0.7
CFDP1-202ENST00000562602 FGD6Q6ZV73 1430 aa10.66□□□□□ -0.7
CFDP1-202ENST00000562602 ATP1B4Q9UN42 357 aaPredicted RBP10.65□□□□□ -0.7
CFDP1-202ENST00000562602 CCDC18Q5T9S5 1454 aa10.65□□□□□ -0.7
CFDP1-202ENST00000562602 WDR97A6NE52 1622 aa10.65□□□□□ -0.7
CFDP1-202ENST00000562602 ABCA5Q8WWZ7 1642 aa10.65□□□□□ -0.7
CFDP1-202ENST00000562602 SAMD9Q5K651 1589 aa10.65□□□□□ -0.71
CFDP1-202ENST00000562602 URB2Q14146 1524 aaKnown RBP10.64□□□□□ -0.71
CFDP1-202ENST00000562602 ST18O60284 1047 aa10.64□□□□□ -0.71
CFDP1-202ENST00000562602 SNAPC4Q5SXM2 1469 aa10.63□□□□□ -0.71
CFDP1-202ENST00000562602 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.63□□□□□ -0.71
CFDP1-202ENST00000562602 HFM1A2PYH4 1435 aa10.63□□□□□ -0.71
CFDP1-202ENST00000562602 KIF21AQ7Z4S6 1674 aa10.63□□□□□ -0.71
CFDP1-202ENST00000562602 P3H3Q8IVL6 736 aa10.62□□□□□ -0.71
CFDP1-202ENST00000562602 L3MBTL3Q96JM7 780 aaPredicted RBP10.62□□□□□ -0.71
CFDP1-202ENST00000562602 EHBP1L1Q8N3D4 1523 aa10.62□□□□□ -0.71
CFDP1-202ENST00000562602 UACAQ9BZF9 1416 aa10.61□□□□□ -0.71
CFDP1-202ENST00000562602 EFCAB3Q8N7B9 438 aa10.61□□□□□ -0.71
CFDP1-202ENST00000562602 GRIN2BQ13224 1484 aa10.61□□□□□ -0.71
CFDP1-202ENST00000562602 MYOM3Q5VTT5 1437 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms