RNA–Protein interactions for RNA: ENST00000560333.1

PDE8A-212, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-212ENST00000560333 TOPBP1Q92547 1522 aa18.36■□□□□ 0.53
PDE8A-212ENST00000560333 IRX5P78411 483 aaPredicted RBP18.34■□□□□ 0.53
PDE8A-212ENST00000560333 KDM4FA0A1W2PPD8 638 aa18.31■□□□□ 0.52
PDE8A-212ENST00000560333 GAPVD1Q14C86 1478 aa18.31■□□□□ 0.52
PDE8A-212ENST00000560333 PSEN1P49768 467 aa18.3■□□□□ 0.52
PDE8A-212ENST00000560333 OCEL1Q9H607 264 aa18.3■□□□□ 0.52
PDE8A-212ENST00000560333 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
PDE8A-212ENST00000560333 SYNJ1O43426 1573 aa18.28■□□□□ 0.52
PDE8A-212ENST00000560333 GOLGA2Q08379 1002 aa18.27■□□□□ 0.52
PDE8A-212ENST00000560333 TARBP1Q13395 1621 aaKnown RBP18.26■□□□□ 0.51
PDE8A-212ENST00000560333 PDAP1Q13442 181 aaKnown RBP18.24■□□□□ 0.51
PDE8A-212ENST00000560333 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
PDE8A-212ENST00000560333 MKRN3Q13064 507 aaKnown RBP18.22■□□□□ 0.51
PDE8A-212ENST00000560333 KIF13AQ9H1H9 1805 aa18.19■□□□□ 0.5
PDE8A-212ENST00000560333 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
PDE8A-212ENST00000560333 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
PDE8A-212ENST00000560333 FAM163AQ96GL9 167 aaPredicted RBP18.17■□□□□ 0.5
PDE8A-212ENST00000560333 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
PDE8A-212ENST00000560333 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
PDE8A-212ENST00000560333 POTEMA6NI47 508 aa18.13■□□□□ 0.49
PDE8A-212ENST00000560333 SLAIN1Q8ND83 568 aa18.13■□□□□ 0.49
PDE8A-212ENST00000560333 POTEGQ6S5H5 508 aa18.11■□□□□ 0.49
PDE8A-212ENST00000560333 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
PDE8A-212ENST00000560333 ERCC6L2Q5T890 1561 aa18.11■□□□□ 0.49
PDE8A-212ENST00000560333 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
PDE8A-212ENST00000560333 RAD54L2Q9Y4B4 1467 aa18.1■□□□□ 0.49
PDE8A-212ENST00000560333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.1■□□□□ 0.493e-10■■□□□ 13.7
PDE8A-212ENST00000560333 HECW2Q9P2P5 1572 aa18.09■□□□□ 0.49
PDE8A-212ENST00000560333 PDCD7Q8N8D1 485 aaKnown RBP18.09■□□□□ 0.49
PDE8A-212ENST00000560333 CABP2Q9NPB3 220 aa18.07■□□□□ 0.48
PDE8A-212ENST00000560333 MAGI1Q96QZ7 1491 aaPredicted RBP18.05■□□□□ 0.48
PDE8A-212ENST00000560333 KDM6BO15054 1643 aa18.05■□□□□ 0.48
PDE8A-212ENST00000560333 L3MBTL3Q96JM7 780 aaPredicted RBP18.04■□□□□ 0.48
PDE8A-212ENST00000560333 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.03■□□□□ 0.48
PDE8A-212ENST00000560333 SYNJ2O15056 1496 aa18.02■□□□□ 0.48
PDE8A-212ENST00000560333 SUPT5HO00267 1087 aaKnown RBP18.02■□□□□ 0.48
PDE8A-212ENST00000560333 LCE2DQ5TA82 110 aaPredicted RBP18.02■□□□□ 0.48
PDE8A-212ENST00000560333 FBXO41Q8TF61 875 aa18.02■□□□□ 0.48
PDE8A-212ENST00000560333 LMTK3Q96Q04 1460 aa18■□□□□ 0.47
PDE8A-212ENST00000560333 FAM69CQ0P6D2 419 aa17.98■□□□□ 0.47
PDE8A-212ENST00000560333 SOGA1O94964 1423 aa17.97■□□□□ 0.47
PDE8A-212ENST00000560333 ADGRL1O94910 1474 aa17.95■□□□□ 0.46
PDE8A-212ENST00000560333 RIOK3O14730 519 aaKnown RBP17.95■□□□□ 0.46
PDE8A-212ENST00000560333 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
PDE8A-212ENST00000560333 C3orf67Q6ZVT6 689 aa17.93■□□□□ 0.46
PDE8A-212ENST00000560333 WDR97A6NE52 1622 aa17.92■□□□□ 0.46
PDE8A-212ENST00000560333 ABCC10Q5T3U5 1492 aa17.9■□□□□ 0.46
PDE8A-212ENST00000560333 PCDH10Q9P2E7 1040 aa17.9■□□□□ 0.46
PDE8A-212ENST00000560333 CEP170Q5SW79 1584 aa17.9■□□□□ 0.46
PDE8A-212ENST00000560333 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
PDE8A-212ENST00000560333 RNF25Q96BH1 459 aaPredicted RBP17.89■□□□□ 0.45
PDE8A-212ENST00000560333 DPY19L2Q6NUT2 758 aa17.88■□□□□ 0.45
PDE8A-212ENST00000560333 DIP2BQ9P265 1576 aa17.87■□□□□ 0.45
PDE8A-212ENST00000560333 EFCAB3Q8N7B9 438 aa17.87■□□□□ 0.45
PDE8A-212ENST00000560333 PLSCR2Q9NRY7 297 aa17.87■□□□□ 0.45
PDE8A-212ENST00000560333 PBRM1Q86U86 1689 aa17.87■□□□□ 0.45
PDE8A-212ENST00000560333 TSPOAP1O95153 1857 aa17.86■□□□□ 0.45
PDE8A-212ENST00000560333 SNPHO15079 494 aa17.86■□□□□ 0.45
PDE8A-212ENST00000560333 VGFO15240 615 aaPredicted RBP17.86■□□□□ 0.45
PDE8A-212ENST00000560333 FGD5Q6ZNL6 1462 aa17.85■□□□□ 0.45
PDE8A-212ENST00000560333 G3V3G9 751 aa17.84■□□□□ 0.45
PDE8A-212ENST00000560333 ST18O60284 1047 aa17.83■□□□□ 0.44
PDE8A-212ENST00000560333 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.82■□□□□ 0.44
PDE8A-212ENST00000560333 ZFP91Q96JP5 570 aaPredicted RBP17.82■□□□□ 0.44
PDE8A-212ENST00000560333 BOLA1Q9Y3E2 137 aa17.8■□□□□ 0.44
PDE8A-212ENST00000560333 SOCS7O14512 581 aa17.79■□□□□ 0.44
PDE8A-212ENST00000560333 TAOK2Q9UL54 1235 aa17.78■□□□□ 0.44
PDE8A-212ENST00000560333 ILDR2Q71H61 639 aa17.77■□□□□ 0.44
PDE8A-212ENST00000560333 SOX12O15370 315 aa17.75■□□□□ 0.43
PDE8A-212ENST00000560333 MAPKBP1O60336 1514 aa17.75■□□□□ 0.43
PDE8A-212ENST00000560333 SHROOM2Q13796 1616 aa17.74■□□□□ 0.43
PDE8A-212ENST00000560333 GRIN2AQ12879 1464 aa17.74■□□□□ 0.43
PDE8A-212ENST00000560333 ECM2O94769 699 aaPredicted RBP17.73■□□□□ 0.43
PDE8A-212ENST00000560333 TMEM121BQ9BXQ6 578 aaPredicted RBP17.71■□□□□ 0.43
PDE8A-212ENST00000560333 DISP3Q9P2K9 1392 aa17.68■□□□□ 0.42
PDE8A-212ENST00000560333 NUP160Q12769 1436 aa17.68■□□□□ 0.42
PDE8A-212ENST00000560333 PRG4Q92954 1404 aaPredicted RBP17.65■□□□□ 0.42
PDE8A-212ENST00000560333 BCL11BQ9C0K0 894 aaPredicted RBP17.65■□□□□ 0.42
PDE8A-212ENST00000560333 CUX1P39880 1505 aa17.64■□□□□ 0.41
PDE8A-212ENST00000560333 PKD2Q13563 968 aa17.64■□□□□ 0.41
PDE8A-212ENST00000560333 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
PDE8A-212ENST00000560333 CDAN1Q8IWY9 1227 aa17.63■□□□□ 0.41
PDE8A-212ENST00000560333 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
PDE8A-212ENST00000560333 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
PDE8A-212ENST00000560333 ADCY10Q96PN6 1610 aa17.62■□□□□ 0.41
PDE8A-212ENST00000560333 STK24Q9Y6E0 443 aa17.61■□□□□ 0.41
PDE8A-212ENST00000560333 MS4A4AQ96JQ5 239 aa17.58■□□□□ 0.4
PDE8A-212ENST00000560333 STK25O00506 426 aa17.57■□□□□ 0.4
PDE8A-212ENST00000560333 NLRP6P59044 892 aa17.56■□□□□ 0.4
PDE8A-212ENST00000560333 MICALL2Q8IY33 904 aa17.56■□□□□ 0.4
PDE8A-212ENST00000560333 MARVELD3Q96A59 401 aa17.56■□□□□ 0.4
PDE8A-212ENST00000560333 RGL2O15211 777 aa17.54■□□□□ 0.4
PDE8A-212ENST00000560333 PPRC1Q5VV67 1664 aaKnown RBP17.54■□□□□ 0.4
PDE8A-212ENST00000560333 ABCA10Q8WWZ4 1543 aa17.52■□□□□ 0.39
PDE8A-212ENST00000560333 TOP2BQ02880 1626 aa17.5■□□□□ 0.39
PDE8A-212ENST00000560333 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
PDE8A-212ENST00000560333 FBXO22Q8NEZ5 403 aa17.48■□□□□ 0.39
PDE8A-212ENST00000560333 JPH4Q96JJ6 628 aa17.48■□□□□ 0.39
PDE8A-212ENST00000560333 EMP3P54852 163 aa17.47■□□□□ 0.39
PDE8A-212ENST00000560333 HOXB3P14651 431 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms