RNA–Protein interactions for RNA: ENST00000560333.1

PDE8A-212, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-212ENST00000560333 AEBP2Q6ZN18 517 aaPredicted RBP38.84■■■■□ 3.81
PDE8A-212ENST00000560333 CHIC1Q5VXU3 224 aa37.11■■■■□ 3.53
PDE8A-212ENST00000560333 SENP3Q9H4L4 574 aaPredicted RBP33.17■■■□□ 2.9
PDE8A-212ENST00000560333 PHF23Q9BUL5 403 aaPredicted RBP32.77■■■□□ 2.84
PDE8A-212ENST00000560333 FOXD1Q16676 465 aa30.86■■■□□ 2.53
PDE8A-212ENST00000560333 PLPPR3Q6T4P5 718 aa29.77■■■□□ 2.36
PDE8A-212ENST00000560333 PPP6R1Q9UPN7 881 aa28.99■■■□□ 2.23
PDE8A-212ENST00000560333 ADRA2BP18089 450 aa28.93■■■□□ 2.22
PDE8A-212ENST00000560333 PIAS4Q8N2W9 510 aaPredicted RBP28.9■■■□□ 2.22
PDE8A-212ENST00000560333 MSH5O43196 834 aa28.84■■■□□ 2.21
PDE8A-212ENST00000560333 POTEDQ86YR6 584 aa27.78■■■□□ 2.04
PDE8A-212ENST00000560333 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
PDE8A-212ENST00000560333 MAPK8IP2Q13387 824 aaPredicted RBP26.51■■□□□ 1.83
PDE8A-212ENST00000560333 DMRT2Q9Y5R5 561 aa26.31■■□□□ 1.8
PDE8A-212ENST00000560333 PPP4R3CPQ6ZMV5 832 aa26.11■■□□□ 1.77
PDE8A-212ENST00000560333 CNKSR2Q8WXI2 1034 aa25.59■■□□□ 1.69
PDE8A-212ENST00000560333 HOXD11P31277 338 aaPredicted RBP25.42■■□□□ 1.66
PDE8A-212ENST00000560333 RNF216Q9NWF9 866 aaPredicted RBP25.3■■□□□ 1.64
PDE8A-212ENST00000560333 DCAF8L1A6NGE4 600 aa25.27■■□□□ 1.64
PDE8A-212ENST00000560333 NCBP3Q53F19 620 aaKnown RBP25.22■■□□□ 1.63
PDE8A-212ENST00000560333 NPM3O75607 178 aaKnown RBP24.78■■□□□ 1.56
PDE8A-212ENST00000560333 CACNB1Q02641 598 aaPredicted RBP24.65■■□□□ 1.54
PDE8A-212ENST00000560333 RNF39Q9H2S5 420 aa24.6■■□□□ 1.53
PDE8A-212ENST00000560333 DNAJC5BQ9UF47 199 aa24.53■■□□□ 1.52
PDE8A-212ENST00000560333 KCNA4P22459 653 aa24.47■■□□□ 1.51
PDE8A-212ENST00000560333 C1QBPQ07021 282 aaKnown RBP24.29■■□□□ 1.48
PDE8A-212ENST00000560333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.27■■□□□ 1.48
PDE8A-212ENST00000560333 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
PDE8A-212ENST00000560333 U3KPZ7 1027 aaPredicted RBP23.71■■□□□ 1.39
PDE8A-212ENST00000560333 SLC4A2P04920 1241 aa23.61■■□□□ 1.37
PDE8A-212ENST00000560333 ABCC9O60706 1549 aa23.46■■□□□ 1.35
PDE8A-212ENST00000560333 CAPN15O75808 1086 aa23.32■■□□□ 1.32
PDE8A-212ENST00000560333 SPINK5Q9NQ38 1064 aaPredicted RBP23.32■■□□□ 1.32
PDE8A-212ENST00000560333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.19■■□□□ 1.3
PDE8A-212ENST00000560333 HNRNPUL2Q1KMD3 747 aaKnown RBP23.19■■□□□ 1.3
PDE8A-212ENST00000560333 SLC4A1APQ9BWU0 796 aaKnown RBP23.18■■□□□ 1.3
PDE8A-212ENST00000560333 APLP2Q06481 763 aa23.17■■□□□ 1.3
PDE8A-212ENST00000560333 DSG3P32926 999 aa23.11■■□□□ 1.29
PDE8A-212ENST00000560333 SAMD1Q6SPF0 538 aaPredicted RBP23.05■■□□□ 1.28
PDE8A-212ENST00000560333 TRHP20396 242 aaPredicted RBP22.99■■□□□ 1.27
PDE8A-212ENST00000560333 ZNF219Q9P2Y4 722 aaPredicted RBP22.96■■□□□ 1.27
PDE8A-212ENST00000560333 MYCNP04198 464 aaPredicted RBP22.94■■□□□ 1.26
PDE8A-212ENST00000560333 FOXD4L1Q9NU39 408 aa22.8■■□□□ 1.24
PDE8A-212ENST00000560333 ABCB7O75027 752 aa22.76■■□□□ 1.23
PDE8A-212ENST00000560333 ZBTB22O15209 634 aa22.46■■□□□ 1.19
PDE8A-212ENST00000560333 POLA2Q14181 598 aa22.42■■□□□ 1.18
PDE8A-212ENST00000560333 ATF5Q9Y2D1 282 aaPredicted RBP22.35■■□□□ 1.17
PDE8A-212ENST00000560333 CCDC180Q9P1Z9 1646 aa22.21■■□□□ 1.15
PDE8A-212ENST00000560333 ATXN8OSP0DMR3 200 aa22.11■■□□□ 1.13
PDE8A-212ENST00000560333 RBM42Q9BTD8 480 aaKnown RBP22.08■■□□□ 1.13
PDE8A-212ENST00000560333 ZBTB12Q9Y330 459 aaPredicted RBP22■■□□□ 1.11
PDE8A-212ENST00000560333 POTEHQ6S545 545 aa21.83■■□□□ 1.09
PDE8A-212ENST00000560333 DNAJC5Q9H3Z4 198 aa21.82■■□□□ 1.08
PDE8A-212ENST00000560333 RB1CC1Q8TDY2 1594 aa21.72■■□□□ 1.07
PDE8A-212ENST00000560333 PABPN1Q86U42 306 aaKnown RBP eCLIP21.65■■□□□ 1.06
PDE8A-212ENST00000560333 OSCARQ8IYS5 282 aa21.65■■□□□ 1.06
PDE8A-212ENST00000560333 CSRNP3Q8WYN3 585 aa21.65■■□□□ 1.06
PDE8A-212ENST00000560333 AKT1S1Q96B36 256 aa21.61■■□□□ 1.05
PDE8A-212ENST00000560333 FBLN2P98095 1184 aa21.56■■□□□ 1.04
PDE8A-212ENST00000560333 CHRDL2Q6WN34 429 aa21.5■■□□□ 1.03
PDE8A-212ENST00000560333 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
PDE8A-212ENST00000560333 REM2Q8IYK8 340 aaPredicted RBP21.4■■□□□ 1.02
PDE8A-212ENST00000560333 SPDYE2BA6NHP3 402 aa21.33■■□□□ 1.01
PDE8A-212ENST00000560333 SPDYE6P0CI01 402 aa21.33■■□□□ 1.01
PDE8A-212ENST00000560333 MKRN4PQ13434 485 aaPredicted RBP21.33■■□□□ 1.01
PDE8A-212ENST00000560333 SPDYE2Q495Y8 402 aa21.33■■□□□ 1.01
PDE8A-212ENST00000560333 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
PDE8A-212ENST00000560333 NACADO15069 1562 aa21.25■□□□□ 0.99
PDE8A-212ENST00000560333 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
PDE8A-212ENST00000560333 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.98
PDE8A-212ENST00000560333 PITPNM1O00562 1244 aa21.13■□□□□ 0.97
PDE8A-212ENST00000560333 ZNF692Q9BU19 519 aaPredicted RBP21.11■□□□□ 0.97
PDE8A-212ENST00000560333 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
PDE8A-212ENST00000560333 DCAF8L2P0C7V8 631 aa21.07■□□□□ 0.96
PDE8A-212ENST00000560333 SSUH2Q9Y2M2 353 aa21.02■□□□□ 0.96
PDE8A-212ENST00000560333 PIP4P2Q8N4L2 257 aa21.01■□□□□ 0.95
PDE8A-212ENST00000560333 FXR2P51116 673 aaKnown RBP eCLIP20.93■□□□□ 0.94
PDE8A-212ENST00000560333 SPDYE1Q8NFV5 336 aaPredicted RBP20.92■□□□□ 0.94
PDE8A-212ENST00000560333 CLEC11AQ9Y240 323 aa20.87■□□□□ 0.93
PDE8A-212ENST00000560333 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
PDE8A-212ENST00000560333 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
PDE8A-212ENST00000560333 HAX1O00165 279 aa20.63■□□□□ 0.89
PDE8A-212ENST00000560333 PRKAR2AP13861 404 aaKnown RBP20.62■□□□□ 0.89
PDE8A-212ENST00000560333 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
PDE8A-212ENST00000560333 CUX2O14529 1486 aa20.57■□□□□ 0.88
PDE8A-212ENST00000560333 PRR29P0C7W0 189 aa20.57■□□□□ 0.88
PDE8A-212ENST00000560333 SP7Q8TDD2 431 aaPredicted RBP20.55■□□□□ 0.88
PDE8A-212ENST00000560333 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
PDE8A-212ENST00000560333 SPDYE4A6NLX3 237 aa20.48■□□□□ 0.87
PDE8A-212ENST00000560333 CHADLQ6NUI6 762 aa20.41■□□□□ 0.86
PDE8A-212ENST00000560333 ERCC6Q03468 1493 aa20.34■□□□□ 0.85
PDE8A-212ENST00000560333 SCRIBQ14160 1630 aa20.33■□□□□ 0.84
PDE8A-212ENST00000560333 EVX2Q03828 476 aa20.32■□□□□ 0.84
PDE8A-212ENST00000560333 STAG3Q9UJ98 1225 aa20.31■□□□□ 0.84
PDE8A-212ENST00000560333 C19orf67A6NJJ6 358 aa20.25■□□□□ 0.83
PDE8A-212ENST00000560333 FARP1Q9Y4F1 1045 aaPredicted RBP20.15■□□□□ 0.82
PDE8A-212ENST00000560333 CREBZFQ9NS37 354 aa20.05■□□□□ 0.8
PDE8A-212ENST00000560333 CD44P16070 742 aaKnown RBP19.98■□□□□ 0.79
PDE8A-212ENST00000560333 PROM2Q8N271 834 aa19.97■□□□□ 0.79
PDE8A-212ENST00000560333 GABBR2O75899 941 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms