RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 ZNF608Q9ULD9 1512 aaPredicted RBP11.13□□□□□ -0.63
MARK3-216ENST00000558953 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
MARK3-216ENST00000558953 POTEB3A0JP26 581 aa11.09□□□□□ -0.63
MARK3-216ENST00000558953 POTEBQ6S5H4 581 aa11.09□□□□□ -0.63
MARK3-216ENST00000558953 TRIM41Q8WV44 630 aa11.09□□□□□ -0.63
MARK3-216ENST00000558953 TARBP1Q13395 1621 aaKnown RBP11.09□□□□□ -0.63
MARK3-216ENST00000558953 EIF4G3O43432 1585 aaKnown RBP11.08□□□□□ -0.64
MARK3-216ENST00000558953 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
MARK3-216ENST00000558953 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
MARK3-216ENST00000558953 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
MARK3-216ENST00000558953 PDCD7Q8N8D1 485 aaKnown RBP11.04□□□□□ -0.64
MARK3-216ENST00000558953 AQRO60306 1485 aaKnown RBP eCLIP11.04□□□□□ -0.645e-8■■■□□ 17.4
MARK3-216ENST00000558953 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
MARK3-216ENST00000558953 L3MBTL3Q96JM7 780 aaPredicted RBP11.03□□□□□ -0.64
MARK3-216ENST00000558953 SOGA1O94964 1423 aa11.02□□□□□ -0.64
MARK3-216ENST00000558953 CHD1O14646 1710 aa11.01□□□□□ -0.65
MARK3-216ENST00000558953 FGD5Q6ZNL6 1462 aa11.01□□□□□ -0.65
MARK3-216ENST00000558953 RAD54L2Q9Y4B4 1467 aa11.01□□□□□ -0.65
MARK3-216ENST00000558953 PYGBP11216 843 aa11.01□□□□□ -0.65
MARK3-216ENST00000558953 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
MARK3-216ENST00000558953 CUX1P39880 1505 aa11□□□□□ -0.65
MARK3-216ENST00000558953 WDR97A6NE52 1622 aa11□□□□□ -0.65
MARK3-216ENST00000558953 RIMBP3CA6NJZ7 1639 aa10.99□□□□□ -0.65
MARK3-216ENST00000558953 RIMBP3BA6NNM3 1639 aa10.99□□□□□ -0.65
MARK3-216ENST00000558953 RIMBP3Q9UFD9 1639 aa10.99□□□□□ -0.65
MARK3-216ENST00000558953 DCAF8Q5TAQ9 597 aa10.98□□□□□ -0.65
MARK3-216ENST00000558953 TDRD9Q8NDG6 1382 aaKnown RBP10.98□□□□□ -0.65
MARK3-216ENST00000558953 ARHGEF11O15085 1522 aa10.96□□□□□ -0.65
MARK3-216ENST00000558953 GOLGA2Q08379 1002 aa10.95□□□□□ -0.66
MARK3-216ENST00000558953 MKRN3Q13064 507 aaKnown RBP10.94□□□□□ -0.66
MARK3-216ENST00000558953 GRIN2BQ13224 1484 aa10.93□□□□□ -0.66
MARK3-216ENST00000558953 SNAPC4Q5SXM2 1469 aa10.93□□□□□ -0.66
MARK3-216ENST00000558953 MAGI1Q96QZ7 1491 aaPredicted RBP10.93□□□□□ -0.66
MARK3-216ENST00000558953 CHMP7Q8WUX9 453 aaPredicted RBP10.91□□□□□ -0.66
MARK3-216ENST00000558953 PBRM1Q86U86 1689 aa10.9□□□□□ -0.66
MARK3-216ENST00000558953 RNF166Q96A37 237 aaPredicted RBP10.9□□□□□ -0.66
MARK3-216ENST00000558953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.9□□□□□ -0.661e-9■■□□□ 13.1
MARK3-216ENST00000558953 ABCA10Q8WWZ4 1543 aa10.89□□□□□ -0.67
MARK3-216ENST00000558953 GAPVD1Q14C86 1478 aa10.89□□□□□ -0.67
MARK3-216ENST00000558953 SYNJ2O15056 1496 aa10.88□□□□□ -0.67
MARK3-216ENST00000558953 SYNJ1O43426 1573 aa10.88□□□□□ -0.67
MARK3-216ENST00000558953 CYB5RLQ6IPT4 315 aa10.88□□□□□ -0.67
MARK3-216ENST00000558953 ABCA5Q8WWZ7 1642 aa10.87□□□□□ -0.67
MARK3-216ENST00000558953 BIVM-ERCC5R4GMW8 1640 aa10.87□□□□□ -0.67
MARK3-216ENST00000558953 WRNQ14191 1432 aaPredicted RBP eCLIP10.86□□□□□ -0.67
MARK3-216ENST00000558953 CLASP1Q7Z460 1538 aa10.86□□□□□ -0.67
MARK3-216ENST00000558953 ZNF467Q7Z7K2 595 aaPredicted RBP10.86□□□□□ -0.67
MARK3-216ENST00000558953 TOP2BQ02880 1626 aa10.86□□□□□ -0.67
MARK3-216ENST00000558953 HOXB3P14651 431 aaPredicted RBP10.85□□□□□ -0.67
MARK3-216ENST00000558953 ARAP1Q96P48 1450 aa10.85□□□□□ -0.67
MARK3-216ENST00000558953 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
MARK3-216ENST00000558953 ERBB3P21860 1342 aa10.84□□□□□ -0.67
MARK3-216ENST00000558953 ZNF710Q8N1W2 664 aa10.82□□□□□ -0.68
MARK3-216ENST00000558953 MYT1LQ9UL68 1186 aa10.81□□□□□ -0.68
MARK3-216ENST00000558953 ILDR1Q86SU0 546 aaPredicted RBP10.8□□□□□ -0.68
MARK3-216ENST00000558953 ADAMTS12P58397 1594 aa10.78□□□□□ -0.68
MARK3-216ENST00000558953 G3V3G9 751 aa10.78□□□□□ -0.68
MARK3-216ENST00000558953 DOK7Q18PE1 504 aa10.78□□□□□ -0.68
MARK3-216ENST00000558953 GRIN2AQ12879 1464 aa10.78□□□□□ -0.68
MARK3-216ENST00000558953 PSEN1P49768 467 aa10.77□□□□□ -0.69
MARK3-216ENST00000558953 DPY19L2Q6NUT2 758 aa10.77□□□□□ -0.69
MARK3-216ENST00000558953 ERICH3Q5RHP9 1530 aa10.77□□□□□ -0.69
MARK3-216ENST00000558953 FHAD1B1AJZ9 1412 aa10.76□□□□□ -0.69
MARK3-216ENST00000558953 BOLA1Q9Y3E2 137 aa10.76□□□□□ -0.69
MARK3-216ENST00000558953 GSE1Q14687 1217 aa10.74□□□□□ -0.69
MARK3-216ENST00000558953 VARS2Q5ST30 1063 aaKnown RBP10.74□□□□□ -0.69
MARK3-216ENST00000558953 NUP160Q12769 1436 aa10.74□□□□□ -0.69
MARK3-216ENST00000558953 CEP170Q5SW79 1584 aa10.73□□□□□ -0.69
MARK3-216ENST00000558953 CHRM1P11229 460 aaPredicted RBP10.73□□□□□ -0.69
MARK3-216ENST00000558953 RIMBP2O15034 1052 aa10.71□□□□□ -0.69
MARK3-216ENST00000558953 SHROOM2Q13796 1616 aa10.7□□□□□ -0.7
MARK3-216ENST00000558953 ERCC6L2Q5T890 1561 aa10.69□□□□□ -0.7
MARK3-216ENST00000558953 PTGER2P43116 358 aa10.68□□□□□ -0.7
MARK3-216ENST00000558953 PDAP1Q13442 181 aaKnown RBP10.67□□□□□ -0.7
MARK3-216ENST00000558953 ZNF687Q8N1G0 1237 aa10.67□□□□□ -0.7
MARK3-216ENST00000558953 KIF27Q86VH2 1401 aa10.66□□□□□ -0.7
MARK3-216ENST00000558953 CABP2Q9NPB3 220 aa10.65□□□□□ -0.7
MARK3-216ENST00000558953 RUSC2Q8N2Y8 1516 aa10.63□□□□□ -0.71
MARK3-216ENST00000558953 CUL7Q14999 1698 aa10.63□□□□□ -0.71
MARK3-216ENST00000558953 JPH4Q96JJ6 628 aa10.63□□□□□ -0.71
MARK3-216ENST00000558953 PRG4Q92954 1404 aaPredicted RBP10.63□□□□□ -0.71
MARK3-216ENST00000558953 IGF1RP08069 1367 aa10.63□□□□□ -0.71
MARK3-216ENST00000558953 ZSWIM6Q9HCJ5 1215 aa10.62□□□□□ -0.71
MARK3-216ENST00000558953 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
MARK3-216ENST00000558953 KIAA0586Q9BVV6 1533 aa10.59□□□□□ -0.71
MARK3-216ENST00000558953 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
MARK3-216ENST00000558953 FKBP8Q14318 412 aa10.58□□□□□ -0.72
MARK3-216ENST00000558953 ANKRD13DQ6ZTN6 518 aa10.57□□□□□ -0.72
MARK3-216ENST00000558953 CARMIL1Q5VZK9 1371 aa10.56□□□□□ -0.72
MARK3-216ENST00000558953 GPR153Q6NV75 609 aa10.55□□□□□ -0.72
MARK3-216ENST00000558953 KIF13AQ9H1H9 1805 aa10.53□□□□□ -0.72
MARK3-216ENST00000558953 TMEM92Q6UXU6 159 aa10.5□□□□□ -0.73
MARK3-216ENST00000558953 ADCY10Q96PN6 1610 aa10.5□□□□□ -0.73
MARK3-216ENST00000558953 MAPKBP1O60336 1514 aa10.49□□□□□ -0.73
MARK3-216ENST00000558953 IQGAP2Q13576 1575 aa10.49□□□□□ -0.73
MARK3-216ENST00000558953 PLA2G2EQ9NZK7 142 aa10.49□□□□□ -0.73
MARK3-216ENST00000558953 CARMIL2Q6F5E8 1435 aa10.49□□□□□ -0.73
MARK3-216ENST00000558953 LSM11P83369 360 aaKnown RBP eCLIP10.48□□□□□ -0.73
MARK3-216ENST00000558953 PTPRGP23470 1445 aa10.48□□□□□ -0.73
MARK3-216ENST00000558953 RAPGEF2Q9Y4G8 1499 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms