RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 AEBP2Q6ZN18 517 aaPredicted RBP24.86■■□□□ 1.57
MARK3-216ENST00000558953 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
MARK3-216ENST00000558953 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
MARK3-216ENST00000558953 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
MARK3-216ENST00000558953 FOXD1Q16676 465 aa19.95■□□□□ 0.78
MARK3-216ENST00000558953 POTEDQ86YR6 584 aa19.55■□□□□ 0.72
MARK3-216ENST00000558953 MSH5O43196 834 aa18.94■□□□□ 0.62
MARK3-216ENST00000558953 PIAS4Q8N2W9 510 aaPredicted RBP18.5■□□□□ 0.55
MARK3-216ENST00000558953 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
MARK3-216ENST00000558953 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
MARK3-216ENST00000558953 ADRA2BP18089 450 aa18.07■□□□□ 0.48
MARK3-216ENST00000558953 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
MARK3-216ENST00000558953 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
MARK3-216ENST00000558953 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.25
MARK3-216ENST00000558953 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
MARK3-216ENST00000558953 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
MARK3-216ENST00000558953 RNF39Q9H2S5 420 aa16.09■□□□□ 0.17
MARK3-216ENST00000558953 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
MARK3-216ENST00000558953 C1QBPQ07021 282 aaKnown RBP15.83■□□□□ 0.12
MARK3-216ENST00000558953 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
MARK3-216ENST00000558953 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
MARK3-216ENST00000558953 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
MARK3-216ENST00000558953 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
MARK3-216ENST00000558953 NISCHQ9Y2I1 1504 aa15.22■□□□□ 0.03
MARK3-216ENST00000558953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.033e-9■■■■□ 19.9
MARK3-216ENST00000558953 POTEHQ6S545 545 aa15.2■□□□□ 0.02
MARK3-216ENST00000558953 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
MARK3-216ENST00000558953 DSG3P32926 999 aa14.85□□□□□ -0.03
MARK3-216ENST00000558953 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
MARK3-216ENST00000558953 CAPN15O75808 1086 aa14.79□□□□□ -0.04
MARK3-216ENST00000558953 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
MARK3-216ENST00000558953 NPM3O75607 178 aaKnown RBP14.75□□□□□ -0.05
MARK3-216ENST00000558953 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
MARK3-216ENST00000558953 ABCB7O75027 752 aa14.38□□□□□ -0.11
MARK3-216ENST00000558953 APLP2Q06481 763 aa14.36□□□□□ -0.11
MARK3-216ENST00000558953 ZNF219Q9P2Y4 722 aaPredicted RBP14.36□□□□□ -0.11
MARK3-216ENST00000558953 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
MARK3-216ENST00000558953 RBM42Q9BTD8 480 aaKnown RBP14.21□□□□□ -0.13
MARK3-216ENST00000558953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
MARK3-216ENST00000558953 HNRNPUL2Q1KMD3 747 aaKnown RBP14.19□□□□□ -0.14
MARK3-216ENST00000558953 CHRDL2Q6WN34 429 aa14.14□□□□□ -0.15
MARK3-216ENST00000558953 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
MARK3-216ENST00000558953 SP7Q8TDD2 431 aaPredicted RBP13.95□□□□□ -0.18
MARK3-216ENST00000558953 KCNA4P22459 653 aa13.91□□□□□ -0.18
MARK3-216ENST00000558953 POLA2Q14181 598 aa13.88□□□□□ -0.19
MARK3-216ENST00000558953 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
MARK3-216ENST00000558953 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
MARK3-216ENST00000558953 CCDC180Q9P1Z9 1646 aa13.66□□□□□ -0.22
MARK3-216ENST00000558953 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
MARK3-216ENST00000558953 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
MARK3-216ENST00000558953 HAX1O00165 279 aa13.6□□□□□ -0.23
MARK3-216ENST00000558953 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
MARK3-216ENST00000558953 ABCC9O60706 1549 aa13.55□□□□□ -0.24
MARK3-216ENST00000558953 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
MARK3-216ENST00000558953 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
MARK3-216ENST00000558953 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
MARK3-216ENST00000558953 ATF5Q9Y2D1 282 aaPredicted RBP13.39□□□□□ -0.27
MARK3-216ENST00000558953 EVX2Q03828 476 aa13.35□□□□□ -0.27
MARK3-216ENST00000558953 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
MARK3-216ENST00000558953 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
MARK3-216ENST00000558953 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
MARK3-216ENST00000558953 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
MARK3-216ENST00000558953 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
MARK3-216ENST00000558953 LHX8Q68G74 356 aa13.08□□□□□ -0.32
MARK3-216ENST00000558953 C19orf67A6NJJ6 358 aa13.07□□□□□ -0.32
MARK3-216ENST00000558953 GABBR2O75899 941 aa13.03□□□□□ -0.32
MARK3-216ENST00000558953 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
MARK3-216ENST00000558953 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
MARK3-216ENST00000558953 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
MARK3-216ENST00000558953 RB1CC1Q8TDY2 1594 aa12.96□□□□□ -0.33
MARK3-216ENST00000558953 FBLN2P98095 1184 aa12.95□□□□□ -0.34
MARK3-216ENST00000558953 NACADO15069 1562 aa12.89□□□□□ -0.35
MARK3-216ENST00000558953 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
MARK3-216ENST00000558953 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
MARK3-216ENST00000558953 DCAF8L2P0C7V8 631 aa12.81□□□□□ -0.36
MARK3-216ENST00000558953 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
MARK3-216ENST00000558953 SSUH2Q9Y2M2 353 aa12.81□□□□□ -0.36
MARK3-216ENST00000558953 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
MARK3-216ENST00000558953 ZBTB22O15209 634 aa12.76□□□□□ -0.37
MARK3-216ENST00000558953 MKRN4PQ13434 485 aaPredicted RBP12.74□□□□□ -0.37
MARK3-216ENST00000558953 MYO15BQ96JP2 1530 aa12.73□□□□□ -0.37
MARK3-216ENST00000558953 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
MARK3-216ENST00000558953 PRR29P0C7W0 189 aa12.72□□□□□ -0.37
MARK3-216ENST00000558953 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
MARK3-216ENST00000558953 UNC13AQ9UPW8 1703 aa12.67□□□□□ -0.38
MARK3-216ENST00000558953 CLCN6P51797 869 aa12.64□□□□□ -0.39
MARK3-216ENST00000558953 ZCCHC6Q5VYS8 1495 aaKnown RBP12.62□□□□□ -0.39
MARK3-216ENST00000558953 PABPN1Q86U42 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
MARK3-216ENST00000558953 DCAF1Q9Y4B6 1507 aa12.59□□□□□ -0.39
MARK3-216ENST00000558953 FARP1Q9Y4F1 1045 aaPredicted RBP12.58□□□□□ -0.4
MARK3-216ENST00000558953 DCBLD2Q96PD2 775 aa12.57□□□□□ -0.4
MARK3-216ENST00000558953 BICRAQ9NZM4 1560 aa12.56□□□□□ -0.4
MARK3-216ENST00000558953 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
MARK3-216ENST00000558953 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
MARK3-216ENST00000558953 SCRIBQ14160 1630 aa12.41□□□□□ -0.42
MARK3-216ENST00000558953 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
MARK3-216ENST00000558953 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
MARK3-216ENST00000558953 POTEMA6NI47 508 aa12.35□□□□□ -0.43
MARK3-216ENST00000558953 GALR2O43603 387 aaPredicted RBP12.31□□□□□ -0.44
MARK3-216ENST00000558953 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms