RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 WDR62O43379 1518 aa9.35□□□□□ -0.91
ATXN3-244ENST00000556898 KIF21AQ7Z4S6 1674 aa9.34□□□□□ -0.91
ATXN3-244ENST00000556898 TOP2AP11388 1531 aaKnown RBP9.34□□□□□ -0.91
ATXN3-244ENST00000556898 GOLGA2Q08379 1002 aa9.33□□□□□ -0.92
ATXN3-244ENST00000556898 PDAP1Q13442 181 aaKnown RBP9.33□□□□□ -0.92
ATXN3-244ENST00000556898 MARVELD3Q96A59 401 aa9.32□□□□□ -0.92
ATXN3-244ENST00000556898 CEP164Q9UPV0 1460 aa9.3□□□□□ -0.92
ATXN3-244ENST00000556898 L3MBTL3Q96JM7 780 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-244ENST00000556898 CABP2Q9NPB3 220 aa9.3□□□□□ -0.92
ATXN3-244ENST00000556898 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
ATXN3-244ENST00000556898 SNPHO15079 494 aa9.28□□□□□ -0.92
ATXN3-244ENST00000556898 C3orf67Q6ZVT6 689 aa9.28□□□□□ -0.92
ATXN3-244ENST00000556898 TMEM121BQ9BXQ6 578 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-244ENST00000556898 CCDC88BA6NC98 1476 aa9.28□□□□□ -0.92
ATXN3-244ENST00000556898 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
ATXN3-244ENST00000556898 CFTRP13569 1480 aa9.25□□□□□ -0.93
ATXN3-244ENST00000556898 POTEB3A0JP26 581 aa9.24□□□□□ -0.93
ATXN3-244ENST00000556898 POTEBQ6S5H4 581 aa9.24□□□□□ -0.93
ATXN3-244ENST00000556898 EFCAB3Q8N7B9 438 aa9.21□□□□□ -0.94
ATXN3-244ENST00000556898 BOLA1Q9Y3E2 137 aa9.21□□□□□ -0.94
ATXN3-244ENST00000556898 URB2Q14146 1524 aaKnown RBP9.21□□□□□ -0.94
ATXN3-244ENST00000556898 SPNS2Q8IVW8 549 aa9.2□□□□□ -0.94
ATXN3-244ENST00000556898 HOXB3P14651 431 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-244ENST00000556898 RNF25Q96BH1 459 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-244ENST00000556898 RIMBP3CA6NJZ7 1639 aa9.17□□□□□ -0.94
ATXN3-244ENST00000556898 RIMBP3BA6NNM3 1639 aa9.17□□□□□ -0.94
ATXN3-244ENST00000556898 RIMBP3Q9UFD9 1639 aa9.17□□□□□ -0.94
ATXN3-244ENST00000556898 ARHGEF11O15085 1522 aa9.17□□□□□ -0.94
ATXN3-244ENST00000556898 EMP3P54852 163 aa9.17□□□□□ -0.94
ATXN3-244ENST00000556898 MMRN1Q13201 1228 aa9.17□□□□□ -0.94
ATXN3-244ENST00000556898 IFT140Q96RY7 1462 aa9.16□□□□□ -0.94
ATXN3-244ENST00000556898 FAM205CA6NFA0 338 aa9.15□□□□□ -0.94
ATXN3-244ENST00000556898 HS3ST6Q96QI5 342 aa9.15□□□□□ -0.94
ATXN3-244ENST00000556898 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.95
ATXN3-244ENST00000556898 KRTAP3-3Q9BYR6 98 aa9.14□□□□□ -0.95
ATXN3-244ENST00000556898 KRTAP3-2Q9BYR7 98 aa9.14□□□□□ -0.95
ATXN3-244ENST00000556898 TMEM92Q6UXU6 159 aa9.12□□□□□ -0.95
ATXN3-244ENST00000556898 MS4A4AQ96JQ5 239 aa9.12□□□□□ -0.95
ATXN3-244ENST00000556898 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-244ENST00000556898 G3V3G9 751 aa9.11□□□□□ -0.95
ATXN3-244ENST00000556898 ZFP91Q96JP5 570 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-244ENST00000556898 RIOK3O14730 519 aaKnown RBP9.1□□□□□ -0.95
ATXN3-244ENST00000556898 MICALL2Q8IY33 904 aa9.08□□□□□ -0.96
ATXN3-244ENST00000556898 PHF8Q9UPP1 1060 aa9.08□□□□□ -0.96
ATXN3-244ENST00000556898 AQRO60306 1485 aaKnown RBP eCLIP9.08□□□□□ -0.96
ATXN3-244ENST00000556898 ABCC8Q09428 1581 aa9.07□□□□□ -0.96
ATXN3-244ENST00000556898 HOXB1P14653 301 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-244ENST00000556898 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
ATXN3-244ENST00000556898 TOPBP1Q92547 1522 aa9.06□□□□□ -0.96
ATXN3-244ENST00000556898 VGFO15240 615 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-244ENST00000556898 SOX12O15370 315 aa9.05□□□□□ -0.96
ATXN3-244ENST00000556898 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-244ENST00000556898 ZNF710Q8N1W2 664 aa9.03□□□□□ -0.96
ATXN3-244ENST00000556898 DOK7Q18PE1 504 aa9.02□□□□□ -0.97
ATXN3-244ENST00000556898 AMER1Q5JTC6 1135 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-244ENST00000556898 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
ATXN3-244ENST00000556898 FBXO22Q8NEZ5 403 aa8.99□□□□□ -0.97
ATXN3-244ENST00000556898 PRDM2Q13029 1718 aa8.99□□□□□ -0.97
ATXN3-244ENST00000556898 ERBB3P21860 1342 aa8.99□□□□□ -0.97
ATXN3-244ENST00000556898 EIF4G3O43432 1585 aaKnown RBP8.99□□□□□ -0.97
ATXN3-244ENST00000556898 SOGA1O94964 1423 aa8.98□□□□□ -0.97
ATXN3-244ENST00000556898 GPR153Q6NV75 609 aa8.98□□□□□ -0.97
ATXN3-244ENST00000556898 BCL11BQ9C0K0 894 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-244ENST00000556898 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
ATXN3-244ENST00000556898 WRNQ14191 1432 aaPredicted RBP eCLIP8.97□□□□□ -0.97
ATXN3-244ENST00000556898 SYNJ1O43426 1573 aa8.96□□□□□ -0.97
ATXN3-244ENST00000556898 VARS2Q5ST30 1063 aaKnown RBP8.96□□□□□ -0.98
ATXN3-244ENST00000556898 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
ATXN3-244ENST00000556898 POLA1P09884 1462 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-244ENST00000556898 CUX1P39880 1505 aa8.95□□□□□ -0.98
ATXN3-244ENST00000556898 RAD54L2Q9Y4B4 1467 aa8.95□□□□□ -0.98
ATXN3-244ENST00000556898 TARBP1Q13395 1621 aaKnown RBP8.94□□□□□ -0.98
ATXN3-244ENST00000556898 NLRP6P59044 892 aa8.94□□□□□ -0.98
ATXN3-244ENST00000556898 MFRPQ9BY79 579 aa8.94□□□□□ -0.98
ATXN3-244ENST00000556898 STK24Q9Y6E0 443 aa8.94□□□□□ -0.98
ATXN3-244ENST00000556898 RIMBP2O15034 1052 aa8.93□□□□□ -0.98
ATXN3-244ENST00000556898 SNAPC4Q5SXM2 1469 aa8.92□□□□□ -0.98
ATXN3-244ENST00000556898 ARSIQ5FYB1 569 aa8.92□□□□□ -0.98
ATXN3-244ENST00000556898 KHSRPQ92945 711 aaKnown RBP eCLIP8.92□□□□□ -0.98
ATXN3-244ENST00000556898 ZSWIM6Q9HCJ5 1215 aa8.92□□□□□ -0.98
ATXN3-244ENST00000556898 CHD1O14646 1710 aa8.91□□□□□ -0.98
ATXN3-244ENST00000556898 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-244ENST00000556898 PKD2Q13563 968 aa8.9□□□□□ -0.98
ATXN3-244ENST00000556898 CLASP1Q7Z460 1538 aa8.9□□□□□ -0.99
ATXN3-244ENST00000556898 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
ATXN3-244ENST00000556898 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
ATXN3-244ENST00000556898 STK25O00506 426 aa8.89□□□□□ -0.99
ATXN3-244ENST00000556898 RGL2O15211 777 aa8.89□□□□□ -0.99
ATXN3-244ENST00000556898 ECM2O94769 699 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-244ENST00000556898 ZNF687Q8N1G0 1237 aa8.89□□□□□ -0.99
ATXN3-244ENST00000556898 TOP2BQ02880 1626 aa8.89□□□□□ -0.99
ATXN3-244ENST00000556898 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
ATXN3-244ENST00000556898 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
ATXN3-244ENST00000556898 FGD5Q6ZNL6 1462 aa8.88□□□□□ -0.99
ATXN3-244ENST00000556898 KIF3CO14782 793 aa8.87□□□□□ -0.99
ATXN3-244ENST00000556898 C2orf72A6NCS6 295 aa8.86□□□□□ -0.99
ATXN3-244ENST00000556898 FAM9AQ8IZU1 332 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-244ENST00000556898 TAOK2Q9UL54 1235 aa8.85□□□□□ -0.99
ATXN3-244ENST00000556898 RUSC2Q8N2Y8 1516 aa8.85□□□□□ -0.99
ATXN3-244ENST00000556898 WDR97A6NE52 1622 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms