RNA–Protein interactions for RNA: ENST00000556890.1

AL390334.1-204, humanhuman

TSL 1 (best)

Gene AL390334.1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-204ENST00000556890 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
AL390334.1-204ENST00000556890 G3V3G9 751 aa12.5□□□□□ -0.41
AL390334.1-204ENST00000556890 PDS5BQ9NTI5 1447 aa12.5□□□□□ -0.41
AL390334.1-204ENST00000556890 RIOK3O14730 519 aaKnown RBP12.49□□□□□ -0.41
AL390334.1-204ENST00000556890 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
AL390334.1-204ENST00000556890 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
AL390334.1-204ENST00000556890 BOLA1Q9Y3E2 137 aa12.48□□□□□ -0.41
AL390334.1-204ENST00000556890 EFCAB3Q8N7B9 438 aa12.46□□□□□ -0.41
AL390334.1-204ENST00000556890 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
AL390334.1-204ENST00000556890 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
AL390334.1-204ENST00000556890 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
AL390334.1-204ENST00000556890 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
AL390334.1-204ENST00000556890 RNF25Q96BH1 459 aaPredicted RBP12.43□□□□□ -0.42
AL390334.1-204ENST00000556890 SOX12O15370 315 aa12.41□□□□□ -0.42
AL390334.1-204ENST00000556890 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
AL390334.1-204ENST00000556890 MRC2Q9UBG0 1479 aa12.4□□□□□ -0.42
AL390334.1-204ENST00000556890 TAOK2Q9UL54 1235 aa12.4□□□□□ -0.42
AL390334.1-204ENST00000556890 WDR62O43379 1518 aa12.39□□□□□ -0.43
AL390334.1-204ENST00000556890 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.39□□□□□ -0.43
AL390334.1-204ENST00000556890 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
AL390334.1-204ENST00000556890 CEP164Q9UPV0 1460 aa12.39□□□□□ -0.43
AL390334.1-204ENST00000556890 FANCD2Q9BXW9 1451 aa12.35□□□□□ -0.43
AL390334.1-204ENST00000556890 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
AL390334.1-204ENST00000556890 CFTRP13569 1480 aa12.34□□□□□ -0.43
AL390334.1-204ENST00000556890 EMP3P54852 163 aa12.32□□□□□ -0.44
AL390334.1-204ENST00000556890 MICALL2Q8IY33 904 aa12.29□□□□□ -0.44
AL390334.1-204ENST00000556890 HOXB3P14651 431 aaPredicted RBP12.28□□□□□ -0.44
AL390334.1-204ENST00000556890 DOK7Q18PE1 504 aa12.27□□□□□ -0.45
AL390334.1-204ENST00000556890 MS4A4AQ96JQ5 239 aa12.27□□□□□ -0.45
AL390334.1-204ENST00000556890 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.45
AL390334.1-204ENST00000556890 NLRP6P59044 892 aa12.26□□□□□ -0.45
AL390334.1-204ENST00000556890 BCL11BQ9C0K0 894 aaPredicted RBP12.26□□□□□ -0.45
AL390334.1-204ENST00000556890 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
AL390334.1-204ENST00000556890 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
AL390334.1-204ENST00000556890 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
AL390334.1-204ENST00000556890 URB2Q14146 1524 aaKnown RBP12.24□□□□□ -0.45
AL390334.1-204ENST00000556890 RIMBP2O15034 1052 aa12.22□□□□□ -0.45
AL390334.1-204ENST00000556890 HOXB1P14653 301 aaPredicted RBP12.22□□□□□ -0.45
AL390334.1-204ENST00000556890 HS3ST6Q96QI5 342 aa12.22□□□□□ -0.45
AL390334.1-204ENST00000556890 STK24Q9Y6E0 443 aa12.22□□□□□ -0.45
AL390334.1-204ENST00000556890 FAM205CA6NFA0 338 aa12.21□□□□□ -0.45
AL390334.1-204ENST00000556890 STK25O00506 426 aa12.19□□□□□ -0.46
AL390334.1-204ENST00000556890 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
AL390334.1-204ENST00000556890 FBXO22Q8NEZ5 403 aa12.19□□□□□ -0.46
AL390334.1-204ENST00000556890 PKD2Q13563 968 aa12.18□□□□□ -0.46
AL390334.1-204ENST00000556890 SPNS2Q8IVW8 549 aa12.18□□□□□ -0.46
AL390334.1-204ENST00000556890 ZSWIM6Q9HCJ5 1215 aa12.17□□□□□ -0.46
AL390334.1-204ENST00000556890 POTEB3A0JP26 581 aa12.16□□□□□ -0.46
AL390334.1-204ENST00000556890 POTEBQ6S5H4 581 aa12.16□□□□□ -0.46
AL390334.1-204ENST00000556890 MMRN1Q13201 1228 aa12.14□□□□□ -0.47
AL390334.1-204ENST00000556890 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
AL390334.1-204ENST00000556890 TOPBP1Q92547 1522 aa12.13□□□□□ -0.47
AL390334.1-204ENST00000556890 DNMBPQ6XZF7 1577 aa12.13□□□□□ -0.47
AL390334.1-204ENST00000556890 RGL2O15211 777 aa12.12□□□□□ -0.47
AL390334.1-204ENST00000556890 KRTAP3-3Q9BYR6 98 aa12.12□□□□□ -0.47
AL390334.1-204ENST00000556890 KRTAP3-2Q9BYR7 98 aa12.12□□□□□ -0.47
AL390334.1-204ENST00000556890 ABCC8Q09428 1581 aa12.12□□□□□ -0.47
AL390334.1-204ENST00000556890 IFT140Q96RY7 1462 aa12.11□□□□□ -0.47
AL390334.1-204ENST00000556890 ERBB3P21860 1342 aa12.11□□□□□ -0.47
AL390334.1-204ENST00000556890 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
AL390334.1-204ENST00000556890 ZNF608Q9ULD9 1512 aaPredicted RBP12.07□□□□□ -0.48
AL390334.1-204ENST00000556890 CHD1O14646 1710 aa12.06□□□□□ -0.48
AL390334.1-204ENST00000556890 GPR153Q6NV75 609 aa12.06□□□□□ -0.48
AL390334.1-204ENST00000556890 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
AL390334.1-204ENST00000556890 VARS2Q5ST30 1063 aaKnown RBP12.02□□□□□ -0.49
AL390334.1-204ENST00000556890 KIF3CO14782 793 aa12.01□□□□□ -0.49
AL390334.1-204ENST00000556890 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
AL390334.1-204ENST00000556890 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
AL390334.1-204ENST00000556890 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
AL390334.1-204ENST00000556890 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
AL390334.1-204ENST00000556890 ZNF687Q8N1G0 1237 aa11.98□□□□□ -0.49
AL390334.1-204ENST00000556890 C2orf72A6NCS6 295 aa11.97□□□□□ -0.49
AL390334.1-204ENST00000556890 ARSIQ5FYB1 569 aa11.97□□□□□ -0.49
AL390334.1-204ENST00000556890 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.49
AL390334.1-204ENST00000556890 WDR97A6NE52 1622 aa11.95□□□□□ -0.5
AL390334.1-204ENST00000556890 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
AL390334.1-204ENST00000556890 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
AL390334.1-204ENST00000556890 PBRM1Q86U86 1689 aa11.94□□□□□ -0.5
AL390334.1-204ENST00000556890 SUPT5HO00267 1087 aaKnown RBP11.94□□□□□ -0.5
AL390334.1-204ENST00000556890 TMC2Q8TDI7 906 aa11.94□□□□□ -0.5
AL390334.1-204ENST00000556890 SOGA1O94964 1423 aa11.94□□□□□ -0.5
AL390334.1-204ENST00000556890 CUX1P39880 1505 aa11.93□□□□□ -0.5
AL390334.1-204ENST00000556890 HS6ST3Q8IZP7 471 aa11.93□□□□□ -0.5
AL390334.1-204ENST00000556890 SLC34A2O95436 690 aa11.92□□□□□ -0.5
AL390334.1-204ENST00000556890 ARHGEF11O15085 1522 aa11.91□□□□□ -0.5
AL390334.1-204ENST00000556890 ZNF316A6NFI3 1004 aaPredicted RBP11.91□□□□□ -0.5
AL390334.1-204ENST00000556890 PPP1R37O75864 691 aa11.89□□□□□ -0.51
AL390334.1-204ENST00000556890 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
AL390334.1-204ENST00000556890 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.512e-6■■□□□ 13.1
AL390334.1-204ENST00000556890 SNAPC4Q5SXM2 1469 aa11.88□□□□□ -0.51
AL390334.1-204ENST00000556890 SYNJ1O43426 1573 aa11.85□□□□□ -0.51
AL390334.1-204ENST00000556890 MAGI1Q96QZ7 1491 aaPredicted RBP11.85□□□□□ -0.51
AL390334.1-204ENST00000556890 PCDHGA4Q9Y5G9 962 aa11.85□□□□□ -0.51
AL390334.1-204ENST00000556890 GRIN2BQ13224 1484 aa11.84□□□□□ -0.51
AL390334.1-204ENST00000556890 PTGER2P43116 358 aa11.84□□□□□ -0.51
AL390334.1-204ENST00000556890 BIVM-ERCC5R4GMW8 1640 aa11.84□□□□□ -0.51
AL390334.1-204ENST00000556890 ABCA5Q8WWZ7 1642 aa11.83□□□□□ -0.52
AL390334.1-204ENST00000556890 NUDT7P0C024 238 aa11.83□□□□□ -0.52
AL390334.1-204ENST00000556890 CHGAP10645 457 aaKnown RBP11.82□□□□□ -0.52
AL390334.1-204ENST00000556890 CHMP7Q8WUX9 453 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms