RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 NCOA2Q15596 1464 aa19.33■□□□□ 0.68
SIX1-205ENST00000555955 ERICH3Q5RHP9 1530 aa19.32■□□□□ 0.68
SIX1-205ENST00000555955 RRP9O43818 475 aaKnown RBP19.32■□□□□ 0.68
SIX1-205ENST00000555955 NAP1L5Q96NT1 182 aaPredicted RBP19.32■□□□□ 0.68
SIX1-205ENST00000555955 FRAT2O75474 233 aaPredicted RBP19.32■□□□□ 0.68
SIX1-205ENST00000555955 PHLDB1Q86UU1 1377 aa19.31■□□□□ 0.68
SIX1-205ENST00000555955 EIF4G2P78344 907 aaKnown RBP eCLIP19.3■□□□□ 0.68
SIX1-205ENST00000555955 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
SIX1-205ENST00000555955 EXOC6Q8TAG9 804 aa19.29■□□□□ 0.68
SIX1-205ENST00000555955 HSP90AA1P07900 732 aaKnown RBP19.29■□□□□ 0.68
SIX1-205ENST00000555955 PRXQ9BXM0 1461 aa19.29■□□□□ 0.68
SIX1-205ENST00000555955 RBM10P98175 930 aaKnown RBP19.25■□□□□ 0.67
SIX1-205ENST00000555955 IFT140Q96RY7 1462 aa19.25■□□□□ 0.67
SIX1-205ENST00000555955 ARHGAP35Q9NRY4 1499 aa19.25■□□□□ 0.67
SIX1-205ENST00000555955 KIF27Q86VH2 1401 aa19.23■□□□□ 0.67
SIX1-205ENST00000555955 TIAM1Q13009 1591 aa19.23■□□□□ 0.67
SIX1-205ENST00000555955 CCDC7Q96M83 1385 aa19.22■□□□□ 0.67
SIX1-205ENST00000555955 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
SIX1-205ENST00000555955 PNNQ9H307 717 aaKnown RBP19.22■□□□□ 0.67
SIX1-205ENST00000555955 RRP1P56182 461 aaKnown RBP19.21■□□□□ 0.67
SIX1-205ENST00000555955 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
SIX1-205ENST00000555955 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
SIX1-205ENST00000555955 LRRC9Q6ZRR7 1453 aa19.2■□□□□ 0.66
SIX1-205ENST00000555955 SKAP1Q86WV1 359 aa19.19■□□□□ 0.66
SIX1-205ENST00000555955 ARID4BQ4LE39 1312 aaPredicted RBP19.19■□□□□ 0.66
SIX1-205ENST00000555955 PBRM1Q86U86 1689 aa19.18■□□□□ 0.66
SIX1-205ENST00000555955 ARXQ96QS3 562 aa19.17■□□□□ 0.66
SIX1-205ENST00000555955 NCOA1Q15788 1441 aa19.17■□□□□ 0.66
SIX1-205ENST00000555955 CUL7Q14999 1698 aa19.16■□□□□ 0.66
SIX1-205ENST00000555955 MAP3K1Q13233 1512 aa19.16■□□□□ 0.66
SIX1-205ENST00000555955 POGKQ9P215 609 aa19.15■□□□□ 0.66
SIX1-205ENST00000555955 UACAQ9BZF9 1416 aa19.15■□□□□ 0.66
SIX1-205ENST00000555955 AAMPQ13685 434 aa19.14■□□□□ 0.65
SIX1-205ENST00000555955 CCDC18Q5T9S5 1454 aa19.14■□□□□ 0.65
SIX1-205ENST00000555955 L1TD1Q5T7N2 865 aaKnown RBP19.13■□□□□ 0.65
SIX1-205ENST00000555955 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
SIX1-205ENST00000555955 CLCN1P35523 988 aa19.11■□□□□ 0.65
SIX1-205ENST00000555955 RCAN3Q9UKA8 241 aa19.1■□□□□ 0.65
SIX1-205ENST00000555955 FGD1P98174 961 aa19.09■□□□□ 0.65
SIX1-205ENST00000555955 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
SIX1-205ENST00000555955 KIF7Q2M1P5 1343 aa19.07■□□□□ 0.64
SIX1-205ENST00000555955 IGF1RP08069 1367 aa19.05■□□□□ 0.64
SIX1-205ENST00000555955 PNISRQ8TF01 805 aaKnown RBP19.05■□□□□ 0.64
SIX1-205ENST00000555955 PDE4CQ08493 712 aa19.03■□□□□ 0.64
SIX1-205ENST00000555955 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
SIX1-205ENST00000555955 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
SIX1-205ENST00000555955 RGS3P49796 1198 aa19.03■□□□□ 0.64
SIX1-205ENST00000555955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.03■□□□□ 0.64
SIX1-205ENST00000555955 ATP1B4Q9UN42 357 aaPredicted RBP19.02■□□□□ 0.64
SIX1-205ENST00000555955 TMC1Q8TDI8 760 aa19.02■□□□□ 0.64
SIX1-205ENST00000555955 GRIN2BQ13224 1484 aa19.02■□□□□ 0.64
SIX1-205ENST00000555955 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.63
SIX1-205ENST00000555955 FAM161AQ3B820 660 aa19■□□□□ 0.63
SIX1-205ENST00000555955 HFM1A2PYH4 1435 aa19■□□□□ 0.63
SIX1-205ENST00000555955 XRCC6P12956 609 aaKnown RBP eCLIP19■□□□□ 0.63
SIX1-205ENST00000555955 L3MBTL2Q969R5 705 aa18.98■□□□□ 0.63
SIX1-205ENST00000555955 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
SIX1-205ENST00000555955 PLIN1O60240 522 aa18.97■□□□□ 0.63
SIX1-205ENST00000555955 C8orf34Q49A92 452 aa18.97■□□□□ 0.63
SIX1-205ENST00000555955 PDCL3Q9H2J4 239 aa18.97■□□□□ 0.63
SIX1-205ENST00000555955 DHX29Q7Z478 1369 aaKnown RBP18.97■□□□□ 0.63
SIX1-205ENST00000555955 PTPN23Q9H3S7 1636 aa18.96■□□□□ 0.63
SIX1-205ENST00000555955 PRDM4Q9UKN5 801 aa18.96■□□□□ 0.63
SIX1-205ENST00000555955 MAGI1Q96QZ7 1491 aaPredicted RBP18.95■□□□□ 0.62
SIX1-205ENST00000555955 GOLGA6L3A6NEY3 463 aa18.95■□□□□ 0.62
SIX1-205ENST00000555955 CRBNQ96SW2 442 aa18.95■□□□□ 0.62
SIX1-205ENST00000555955 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
SIX1-205ENST00000555955 PANK2Q9BZ23 570 aa18.95■□□□□ 0.62
SIX1-205ENST00000555955 CALD1Q05682 793 aaKnown RBP18.94■□□□□ 0.62
SIX1-205ENST00000555955 PTPRKQ15262 1439 aa18.93■□□□□ 0.62
SIX1-205ENST00000555955 NAIPQ13075 1403 aa18.92■□□□□ 0.62
SIX1-205ENST00000555955 CENPJQ9HC77 1338 aaPredicted RBP18.92■□□□□ 0.62
SIX1-205ENST00000555955 CARMIL1Q5VZK9 1371 aa18.92■□□□□ 0.62
SIX1-205ENST00000555955 FMN1Q68DA7 1419 aa18.92■□□□□ 0.62
SIX1-205ENST00000555955 CTTNBP2Q8WZ74 1663 aa18.92■□□□□ 0.62
SIX1-205ENST00000555955 KTN1Q86UP2 1357 aaKnown RBP18.9■□□□□ 0.62
SIX1-205ENST00000555955 BCL11BQ9C0K0 894 aaPredicted RBP18.9■□□□□ 0.62
SIX1-205ENST00000555955 NBPF8Q3BBV2 869 aa18.9■□□□□ 0.62
SIX1-205ENST00000555955 CFAP43Q8NDM7 1665 aa18.9■□□□□ 0.62
SIX1-205ENST00000555955 FGD6Q6ZV73 1430 aa18.89■□□□□ 0.62
SIX1-205ENST00000555955 SLKQ9H2G2 1235 aaPredicted RBP18.89■□□□□ 0.61
SIX1-205ENST00000555955 FSD2A1L4K1 749 aa18.88■□□□□ 0.61
SIX1-205ENST00000555955 SPATA31E1Q6ZUB1 1445 aa18.88■□□□□ 0.61
SIX1-205ENST00000555955 SNAPC4Q5SXM2 1469 aa18.88■□□□□ 0.61
SIX1-205ENST00000555955 TPM2P07951 284 aa18.87■□□□□ 0.61
SIX1-205ENST00000555955 LRPPRCP42704 1394 aaKnown RBP18.87■□□□□ 0.61
SIX1-205ENST00000555955 KDM2BQ8NHM5 1336 aa18.87■□□□□ 0.61
SIX1-205ENST00000555955 ESPNB1AK53 854 aa18.87■□□□□ 0.61
SIX1-205ENST00000555955 PDE3BQ13370 1112 aa18.86■□□□□ 0.61
SIX1-205ENST00000555955 CENPQQ7L2Z9 268 aaPredicted RBP18.86■□□□□ 0.61
SIX1-205ENST00000555955 POLR1AO95602 1720 aaPredicted RBP18.86■□□□□ 0.61
SIX1-205ENST00000555955 P3H3Q8IVL6 736 aa18.86■□□□□ 0.61
SIX1-205ENST00000555955 CDCA7LQ96GN5 454 aa18.85■□□□□ 0.61
SIX1-205ENST00000555955 GZF1Q9H116 711 aaPredicted RBP18.85■□□□□ 0.61
SIX1-205ENST00000555955 SYNJ2O15056 1496 aa18.84■□□□□ 0.61
SIX1-205ENST00000555955 BECN1Q14457 450 aa18.82■□□□□ 0.6
SIX1-205ENST00000555955 PCF11O94913 1555 aaKnown RBP18.82■□□□□ 0.6
SIX1-205ENST00000555955 MYH16Q9H6N6 1097 aa18.82■□□□□ 0.6
SIX1-205ENST00000555955 ERBB4Q15303 1308 aa18.81■□□□□ 0.6
SIX1-205ENST00000555955 DENND4BO75064 1496 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms