RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 MSH5O43196 834 aa15.48■□□□□ 0.07
PTPN21-205ENST00000554270 RTL5Q5HYW3 569 aaPredicted RBP15.47■□□□□ 0.07
PTPN21-205ENST00000554270 KIF7Q2M1P5 1343 aa15.46■□□□□ 0.07
PTPN21-205ENST00000554270 HNRNPMP52272 730 aaKnown RBP eCLIP15.46■□□□□ 0.07
PTPN21-205ENST00000554270 ANP32AP39687 249 aaKnown RBP15.45■□□□□ 0.06
PTPN21-205ENST00000554270 SNAPC4Q5SXM2 1469 aa15.44■□□□□ 0.06
PTPN21-205ENST00000554270 PTPN23Q9H3S7 1636 aa15.43■□□□□ 0.06
PTPN21-205ENST00000554270 CCDC7Q96M83 1385 aa15.43■□□□□ 0.06
PTPN21-205ENST00000554270 NUP155O75694 1391 aa15.42■□□□□ 0.06
PTPN21-205ENST00000554270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.42■□□□□ 0.06
PTPN21-205ENST00000554270 JPH4Q96JJ6 628 aa15.4■□□□□ 0.06
PTPN21-205ENST00000554270 PRG4Q92954 1404 aaPredicted RBP15.4■□□□□ 0.06
PTPN21-205ENST00000554270 EPRSP07814 1512 aaKnown RBP15.4■□□□□ 0.06
PTPN21-205ENST00000554270 ST20-MTHFSA0A0A6YYL1 179 aa15.4■□□□□ 0.06
PTPN21-205ENST00000554270 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
PTPN21-205ENST00000554270 CFAP43Q8NDM7 1665 aa15.39■□□□□ 0.05
PTPN21-205ENST00000554270 PRDM2Q13029 1718 aa15.39■□□□□ 0.05
PTPN21-205ENST00000554270 CC2D1BQ5T0F9 858 aaKnown RBP15.39■□□□□ 0.05
PTPN21-205ENST00000554270 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
PTPN21-205ENST00000554270 GRIN2BQ13224 1484 aa15.38■□□□□ 0.05
PTPN21-205ENST00000554270 ZNF608Q9ULD9 1512 aaPredicted RBP15.37■□□□□ 0.05
PTPN21-205ENST00000554270 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
PTPN21-205ENST00000554270 EHBP1L1Q8N3D4 1523 aa15.36■□□□□ 0.05
PTPN21-205ENST00000554270 CUL7Q14999 1698 aa15.36■□□□□ 0.05
PTPN21-205ENST00000554270 SUPT6HQ7KZ85 1726 aaKnown RBP15.36■□□□□ 0.05
PTPN21-205ENST00000554270 CNTLNQ9NXG0 1405 aa15.36■□□□□ 0.05
PTPN21-205ENST00000554270 MAGI3Q5TCQ9 1506 aa15.36■□□□□ 0.05
PTPN21-205ENST00000554270 LAS1LQ9Y4W2 734 aaKnown RBP15.34■□□□□ 0.05
PTPN21-205ENST00000554270 USP47Q96K76 1375 aa15.34■□□□□ 0.05
PTPN21-205ENST00000554270 NOP58Q9Y2X3 529 aaKnown RBP15.34■□□□□ 0.05
PTPN21-205ENST00000554270 THOC2Q8NI27 1593 aaKnown RBP15.34■□□□□ 0.05
PTPN21-205ENST00000554270 DEKP35659 375 aaKnown RBP15.33■□□□□ 0.05
PTPN21-205ENST00000554270 DAXXQ9UER7 740 aaPredicted RBP15.33■□□□□ 0.04
PTPN21-205ENST00000554270 DAPK1P53355 1430 aa15.31■□□□□ 0.04
PTPN21-205ENST00000554270 ANKRD30BQ9BXX2 1392 aa15.31■□□□□ 0.04
PTPN21-205ENST00000554270 CTTNBP2Q8WZ74 1663 aa15.31■□□□□ 0.04
PTPN21-205ENST00000554270 ABCC5O15440 1437 aa15.3■□□□□ 0.04
PTPN21-205ENST00000554270 AKNAQ7Z591 1439 aa15.3■□□□□ 0.04
PTPN21-205ENST00000554270 KDM6BO15054 1643 aa15.3■□□□□ 0.04
PTPN21-205ENST00000554270 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
PTPN21-205ENST00000554270 ZBED9Q6R2W3 1325 aa15.29■□□□□ 0.04
PTPN21-205ENST00000554270 ANKRD30AQ9BXX3 1397 aa15.29■□□□□ 0.04
PTPN21-205ENST00000554270 PAK3O75914 559 aaPredicted RBP15.29■□□□□ 0.04
PTPN21-205ENST00000554270 PLB1Q6P1J6 1458 aa15.29■□□□□ 0.04
PTPN21-205ENST00000554270 UGGT2Q9NYU1 1516 aa15.29■□□□□ 0.04
PTPN21-205ENST00000554270 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
PTPN21-205ENST00000554270 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
PTPN21-205ENST00000554270 NUDCQ9Y266 331 aa15.27■□□□□ 0.04
PTPN21-205ENST00000554270 PLIN1O60240 522 aa15.27■□□□□ 0.03
PTPN21-205ENST00000554270 FANCIQ9NVI1 1328 aa15.25■□□□□ 0.03
PTPN21-205ENST00000554270 NBPF1Q3BBV0 1214 aa15.25■□□□□ 0.03
PTPN21-205ENST00000554270 ROCK2O75116 1388 aaKnown RBP15.25■□□□□ 0.03
PTPN21-205ENST00000554270 MIA2Q96PC5 1412 aa15.25■□□□□ 0.03
PTPN21-205ENST00000554270 HECW1Q76N89 1606 aa15.24■□□□□ 0.03
PTPN21-205ENST00000554270 CHGAP10645 457 aaKnown RBP15.24■□□□□ 0.03
PTPN21-205ENST00000554270 EXOC6Q8TAG9 804 aa15.24■□□□□ 0.03
PTPN21-205ENST00000554270 ANKRD50Q9ULJ7 1429 aa15.23■□□□□ 0.03
PTPN21-205ENST00000554270 SKAP1Q86WV1 359 aa15.22■□□□□ 0.03
PTPN21-205ENST00000554270 NCOA1Q15788 1441 aa15.21■□□□□ 0.03
PTPN21-205ENST00000554270 CARMIL2Q6F5E8 1435 aa15.21■□□□□ 0.03
PTPN21-205ENST00000554270 KIF21AQ7Z4S6 1674 aa15.21■□□□□ 0.02
PTPN21-205ENST00000554270 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
PTPN21-205ENST00000554270 CDCA7LQ96GN5 454 aa15.19■□□□□ 0.02
PTPN21-205ENST00000554270 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
PTPN21-205ENST00000554270 RPRD2Q5VT52 1461 aaKnown RBP15.19■□□□□ 0.02
PTPN21-205ENST00000554270 RCAN3Q9UKA8 241 aa15.19■□□□□ 0.02
PTPN21-205ENST00000554270 SAMD9Q5K651 1589 aa15.18■□□□□ 0.02
PTPN21-205ENST00000554270 ERICH6BQ5W0A0 696 aa15.18■□□□□ 0.02
PTPN21-205ENST00000554270 ABCA5Q8WWZ7 1642 aa15.18■□□□□ 0.02
PTPN21-205ENST00000554270 NUP153P49790 1475 aaKnown RBP15.18■□□□□ 0.02
PTPN21-205ENST00000554270 KIF15Q9NS87 1388 aa15.17■□□□□ 0.02
PTPN21-205ENST00000554270 TROQ12816 1431 aaPredicted RBP15.17■□□□□ 0.02
PTPN21-205ENST00000554270 PNISRQ8TF01 805 aaKnown RBP15.17■□□□□ 0.02
PTPN21-205ENST00000554270 NEFMP07197 916 aa15.16■□□□□ 0.02
PTPN21-205ENST00000554270 RGS3P49796 1198 aa15.16■□□□□ 0.02
PTPN21-205ENST00000554270 PANK3Q9H999 370 aa15.16■□□□□ 0.02
PTPN21-205ENST00000554270 KIAA0586Q9BVV6 1533 aa15.16■□□□□ 0.02
PTPN21-205ENST00000554270 KIAA1107Q9UPP5 1409 aa15.15■□□□□ 0.02
PTPN21-205ENST00000554270 TNNT2P45379 298 aaPredicted RBP15.15■□□□□ 0.02
PTPN21-205ENST00000554270 SLC4A3P48751 1232 aa15.15■□□□□ 0.02
PTPN21-205ENST00000554270 CAMSAP2Q08AD1 1489 aa15.15■□□□□ 0.02
PTPN21-205ENST00000554270 LRRIQ1Q96JM4 1722 aa15.14■□□□□ 0.01
PTPN21-205ENST00000554270 ARHGEF11O15085 1522 aa15.14■□□□□ 0.01
PTPN21-205ENST00000554270 WDR43Q15061 677 aaKnown RBP eCLIP15.14■□□□□ 0.01
PTPN21-205ENST00000554270 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.01
PTPN21-205ENST00000554270 ROCK1Q13464 1354 aa15.13■□□□□ 0.01
PTPN21-205ENST00000554270 CANXP27824 592 aaKnown RBP15.13■□□□□ 0.01
PTPN21-205ENST00000554270 TCOF1Q13428 1488 aaKnown RBP15.13■□□□□ 0.01
PTPN21-205ENST00000554270 NEUROD2Q15784 382 aa15.12■□□□□ 0.01
PTPN21-205ENST00000554270 ARXQ96QS3 562 aa15.12■□□□□ 0.01
PTPN21-205ENST00000554270 PTPRGP23470 1445 aa15.12■□□□□ 0.01
PTPN21-205ENST00000554270 MYBBP1AQ9BQG0 1328 aaKnown RBP15.11■□□□□ 0.01
PTPN21-205ENST00000554270 WDR62O43379 1518 aa15.11■□□□□ 0.01
PTPN21-205ENST00000554270 KNSTRNQ9Y448 316 aa15.11■□□□□ 0.01
PTPN21-205ENST00000554270 GRIN2AQ12879 1464 aa15.11■□□□□ 0.01
PTPN21-205ENST00000554270 C9orf84Q5VXU9 1444 aa15.11■□□□□ 0.01
PTPN21-205ENST00000554270 KDM5BQ9UGL1 1544 aa15.11■□□□□ 0.01
PTPN21-205ENST00000554270 KTN1Q86UP2 1357 aaKnown RBP15.1■□□□□ 0.01
PTPN21-205ENST00000554270 GPATCH8Q9UKJ3 1502 aaKnown RBP15.1■□□□□ 0.01
PTPN21-205ENST00000554270 IFT140Q96RY7 1462 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms