RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
NRDE2-202ENST00000553409 DHX29Q7Z478 1369 aaKnown RBP15.25■□□□□ 0.03
NRDE2-202ENST00000553409 POLR3GLQ9BT43 218 aa15.24■□□□□ 0.03
NRDE2-202ENST00000553409 PRDM2Q13029 1718 aa15.24■□□□□ 0.03
NRDE2-202ENST00000553409 LRRIQ1Q96JM4 1722 aa15.22■□□□□ 0.03
NRDE2-202ENST00000553409 SUPT6HQ7KZ85 1726 aaKnown RBP15.22■□□□□ 0.03
NRDE2-202ENST00000553409 ANKRD30BQ9BXX2 1392 aa15.22■□□□□ 0.03
NRDE2-202ENST00000553409 PDE4AP27815 886 aa15.21■□□□□ 0.03
NRDE2-202ENST00000553409 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.03
NRDE2-202ENST00000553409 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.21■□□□□ 0.03
NRDE2-202ENST00000553409 GRIN2BQ13224 1484 aa15.21■□□□□ 0.03
NRDE2-202ENST00000553409 UGGT2Q9NYU1 1516 aa15.21■□□□□ 0.03
NRDE2-202ENST00000553409 USP35Q9P2H5 1018 aa15.21■□□□□ 0.03
NRDE2-202ENST00000553409 RPRD2Q5VT52 1461 aaKnown RBP15.21■□□□□ 0.03
NRDE2-202ENST00000553409 TEX14Q8IWB6 1497 aa15.2■□□□□ 0.02
NRDE2-202ENST00000553409 EXOC6Q8TAG9 804 aa15.2■□□□□ 0.02
NRDE2-202ENST00000553409 EHBP1L1Q8N3D4 1523 aa15.2■□□□□ 0.02
NRDE2-202ENST00000553409 ABCA5Q8WWZ7 1642 aa15.2■□□□□ 0.02
NRDE2-202ENST00000553409 GCC2Q8IWJ2 1684 aa15.2■□□□□ 0.02
NRDE2-202ENST00000553409 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
NRDE2-202ENST00000553409 CTTNBP2Q8WZ74 1663 aa15.19■□□□□ 0.02
NRDE2-202ENST00000553409 TCOF1Q13428 1488 aaKnown RBP15.19■□□□□ 0.02
NRDE2-202ENST00000553409 MAGI3Q5TCQ9 1506 aa15.18■□□□□ 0.02
NRDE2-202ENST00000553409 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
NRDE2-202ENST00000553409 WASHC2CQ9Y4E1 1318 aa15.18■□□□□ 0.02
NRDE2-202ENST00000553409 TMC1Q8TDI8 760 aa15.18■□□□□ 0.02
NRDE2-202ENST00000553409 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
NRDE2-202ENST00000553409 BACH2Q9BYV9 841 aa15.18■□□□□ 0.02
NRDE2-202ENST00000553409 RRP1P56182 461 aaKnown RBP15.17■□□□□ 0.02
NRDE2-202ENST00000553409 PPM1GO15355 546 aaPredicted RBP15.15■□□□□ 0.02
NRDE2-202ENST00000553409 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
NRDE2-202ENST00000553409 MIA2Q96PC5 1412 aa15.14■□□□□ 0.01
NRDE2-202ENST00000553409 POLA1P09884 1462 aaPredicted RBP15.14■□□□□ 0.01
NRDE2-202ENST00000553409 POLR1AO95602 1720 aaPredicted RBP15.14■□□□□ 0.01
NRDE2-202ENST00000553409 CC2D2AQ9P2K1 1620 aa15.14■□□□□ 0.01
NRDE2-202ENST00000553409 SAMD9Q5K651 1589 aa15.13■□□□□ 0.01
NRDE2-202ENST00000553409 CUL7Q14999 1698 aa15.13■□□□□ 0.01
NRDE2-202ENST00000553409 BRPF3Q9ULD4 1205 aa15.13■□□□□ 0.01
NRDE2-202ENST00000553409 ZNF326Q5BKZ1 582 aaKnown RBP15.13■□□□□ 0.01
NRDE2-202ENST00000553409 FANCD2Q9BXW9 1451 aa15.12■□□□□ 0.01
NRDE2-202ENST00000553409 USP47Q96K76 1375 aa15.12■□□□□ 0.01
NRDE2-202ENST00000553409 THOC2Q8NI27 1593 aaKnown RBP15.12■□□□□ 0.01
NRDE2-202ENST00000553409 MS4A1P11836 297 aa15.12■□□□□ 0.01
NRDE2-202ENST00000553409 RCAN3Q9UKA8 241 aa15.12■□□□□ 0.01
NRDE2-202ENST00000553409 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
NRDE2-202ENST00000553409 BCORL1Q5H9F3 1711 aa15.1■□□□□ 0.01
NRDE2-202ENST00000553409 LRPPRCP42704 1394 aaKnown RBP15.09■□□□□ 0.01
NRDE2-202ENST00000553409 SKAP1Q86WV1 359 aa15.09■□□□□ 0.01
NRDE2-202ENST00000553409 ARID3CA6NKF2 412 aa15.08■□□□□ 0
NRDE2-202ENST00000553409 GSE1Q14687 1217 aa15.08■□□□□ 0
NRDE2-202ENST00000553409 TOPBP1Q92547 1522 aa15.08■□□□□ 0
NRDE2-202ENST00000553409 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
NRDE2-202ENST00000553409 ARID4BQ4LE39 1312 aaPredicted RBP15.06■□□□□ 0
NRDE2-202ENST00000553409 NFKBIBQ15653 356 aa15.05■□□□□ -0
NRDE2-202ENST00000553409 TDRD9Q8NDG6 1382 aaKnown RBP15.04■□□□□ -0
NRDE2-202ENST00000553409 SLC4A3P48751 1232 aa15.04■□□□□ -0
NRDE2-202ENST00000553409 ROCK1Q13464 1354 aa15.04■□□□□ -0
NRDE2-202ENST00000553409 KIF15Q9NS87 1388 aa15.04■□□□□ -0
NRDE2-202ENST00000553409 DDRGK1Q96HY6 314 aa15.04■□□□□ -0
NRDE2-202ENST00000553409 DAPK1P53355 1430 aa15.04■□□□□ -0
NRDE2-202ENST00000553409 MYBBP1AQ9BQG0 1328 aaKnown RBP15.03■□□□□ -0
NRDE2-202ENST00000553409 BRD4O60885 1362 aaPredicted RBP15.03■□□□□ -0
NRDE2-202ENST00000553409 PLIN1O60240 522 aa15.03■□□□□ -0
NRDE2-202ENST00000553409 ZNF644Q9H582 1327 aaPredicted RBP15.03■□□□□ -0
NRDE2-202ENST00000553409 CDCA7LQ96GN5 454 aa15.02■□□□□ -0
NRDE2-202ENST00000553409 MBD5Q9P267 1494 aa15.02■□□□□ -0
NRDE2-202ENST00000553409 ROCK2O75116 1388 aaKnown RBP15.02■□□□□ -0
NRDE2-202ENST00000553409 FRAT1Q92837 279 aaPredicted RBP15.02■□□□□ -0
NRDE2-202ENST00000553409 ABCC5O15440 1437 aa15.02□□□□□ -0.01
NRDE2-202ENST00000553409 EPRSP07814 1512 aaKnown RBP15.02□□□□□ -0.01
NRDE2-202ENST00000553409 CDK13Q14004 1512 aaKnown RBP15.01□□□□□ -0.01
NRDE2-202ENST00000553409 UBE2Q2Q8WVN8 375 aa15.01□□□□□ -0.01
NRDE2-202ENST00000553409 RALBP1Q15311 655 aa15□□□□□ -0.01
NRDE2-202ENST00000553409 PZPP20742 1482 aa14.99□□□□□ -0.01
NRDE2-202ENST00000553409 PDE3BQ13370 1112 aa14.99□□□□□ -0.01
NRDE2-202ENST00000553409 KDM5CP41229 1560 aa14.99□□□□□ -0.01
NRDE2-202ENST00000553409 CRBNQ96SW2 442 aa14.99□□□□□ -0.01
NRDE2-202ENST00000553409 CARD11Q9BXL7 1154 aa14.99□□□□□ -0.01
NRDE2-202ENST00000553409 EIF5BO60841 1220 aaKnown RBP14.98□□□□□ -0.01
NRDE2-202ENST00000553409 ST20-MTHFSA0A0A6YYL1 179 aa14.97□□□□□ -0.01
NRDE2-202ENST00000553409 NESP48681 1621 aa14.96□□□□□ -0.01
NRDE2-202ENST00000553409 PKD2Q13563 968 aa14.96□□□□□ -0.01
NRDE2-202ENST00000553409 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
NRDE2-202ENST00000553409 KTN1Q86UP2 1357 aaKnown RBP14.95□□□□□ -0.02
NRDE2-202ENST00000553409 NLRP13Q86W25 1043 aa14.95□□□□□ -0.02
NRDE2-202ENST00000553409 DAXXQ9UER7 740 aaPredicted RBP14.95□□□□□ -0.02
NRDE2-202ENST00000553409 KIAA1107Q9UPP5 1409 aa14.94□□□□□ -0.02
NRDE2-202ENST00000553409 KIF14Q15058 1648 aa14.93□□□□□ -0.02
NRDE2-202ENST00000553409 DNMT1P26358 1616 aaKnown RBP14.93□□□□□ -0.02
NRDE2-202ENST00000553409 C20orf194Q5TEA3 1177 aa14.92□□□□□ -0.02
NRDE2-202ENST00000553409 KIF21AQ7Z4S6 1674 aa14.92□□□□□ -0.02
NRDE2-202ENST00000553409 FRAT2O75474 233 aaPredicted RBP14.91□□□□□ -0.02
NRDE2-202ENST00000553409 KDM2AQ9Y2K7 1162 aa14.91□□□□□ -0.02
NRDE2-202ENST00000553409 RALGAPBQ86X10 1494 aa14.91□□□□□ -0.02
NRDE2-202ENST00000553409 UHRF1BP1Q6BDS2 1440 aa14.9□□□□□ -0.02
NRDE2-202ENST00000553409 KDM2BQ8NHM5 1336 aa14.89□□□□□ -0.03
NRDE2-202ENST00000553409 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
NRDE2-202ENST00000553409 PARD3Q8TEW0 1356 aa14.89□□□□□ -0.03
NRDE2-202ENST00000553409 DCAF11Q8TEB1 546 aa14.88□□□□□ -0.03
NRDE2-202ENST00000553409 URB2Q14146 1524 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms