RNA–Protein interactions for RNA: ENST00000553322.1

AC008056.1-201, humanhuman

TSL 3 BASIC

Gene AC008056.1, Length 394 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008056.1-201ENST00000553322 CUX1P39880 1505 aa6.47□□□□□ -1.37
AC008056.1-201ENST00000553322 LCE2BO14633 110 aa6.47□□□□□ -1.37
AC008056.1-201ENST00000553322 TRAF7Q6Q0C0 670 aa6.47□□□□□ -1.37
AC008056.1-201ENST00000553322 NESP48681 1621 aa6.47□□□□□ -1.37
AC008056.1-201ENST00000553322 DNMBPQ6XZF7 1577 aa6.46□□□□□ -1.38
AC008056.1-201ENST00000553322 SGIP1Q9BQI5 828 aa6.46□□□□□ -1.38
AC008056.1-201ENST00000553322 TMEM106CQ9BVX2 250 aa6.46□□□□□ -1.38
AC008056.1-201ENST00000553322 CEP164Q9UPV0 1460 aa6.46□□□□□ -1.38
AC008056.1-201ENST00000553322 LSM11P83369 360 aaKnown RBP eCLIP6.45□□□□□ -1.38
AC008056.1-201ENST00000553322 TRIM41Q8WV44 630 aa6.45□□□□□ -1.38
AC008056.1-201ENST00000553322 IFFO2Q5TF58 517 aa6.44□□□□□ -1.38
AC008056.1-201ENST00000553322 EEA1Q15075 1411 aa6.43□□□□□ -1.38
AC008056.1-201ENST00000553322 PDS5BQ9NTI5 1447 aa6.43□□□□□ -1.38
AC008056.1-201ENST00000553322 A0A0G2JS52 829 aa6.43□□□□□ -1.38
AC008056.1-201ENST00000553322 WDR97A6NE52 1622 aa6.43□□□□□ -1.38
AC008056.1-201ENST00000553322 TOPBP1Q92547 1522 aa6.41□□□□□ -1.38
AC008056.1-201ENST00000553322 LAPTM4AQ15012 233 aa6.41□□□□□ -1.38
AC008056.1-201ENST00000553322 DOK7Q18PE1 504 aa6.41□□□□□ -1.38
AC008056.1-201ENST00000553322 L3MBTL3Q96JM7 780 aaPredicted RBP6.41□□□□□ -1.38
AC008056.1-201ENST00000553322 FGD5Q6ZNL6 1462 aa6.41□□□□□ -1.38
AC008056.1-201ENST00000553322 URB2Q14146 1524 aaKnown RBP6.4□□□□□ -1.38
AC008056.1-201ENST00000553322 THOC2Q8NI27 1593 aaKnown RBP6.4□□□□□ -1.38
AC008056.1-201ENST00000553322 WDR62O43379 1518 aa6.4□□□□□ -1.39
AC008056.1-201ENST00000553322 KIF21BO75037 1637 aa6.39□□□□□ -1.39
AC008056.1-201ENST00000553322 ZNF787Q6DD87 383 aa6.39□□□□□ -1.39
AC008056.1-201ENST00000553322 PCDHB13Q9Y5F0 798 aa6.39□□□□□ -1.39
AC008056.1-201ENST00000553322 MRC2Q9UBG0 1479 aa6.39□□□□□ -1.39
AC008056.1-201ENST00000553322 SOGA1O94964 1423 aa6.38□□□□□ -1.39
AC008056.1-201ENST00000553322 POLA1P09884 1462 aaPredicted RBP6.38□□□□□ -1.39
AC008056.1-201ENST00000553322 ABCA5Q8WWZ7 1642 aa6.36□□□□□ -1.39
AC008056.1-201ENST00000553322 ABCA10Q8WWZ4 1543 aa6.36□□□□□ -1.39
AC008056.1-201ENST00000553322 RIMBP2O15034 1052 aa6.36□□□□□ -1.39
AC008056.1-201ENST00000553322 SUZ12Q15022 739 aaKnown RBP6.35□□□□□ -1.39
AC008056.1-201ENST00000553322 TARBP1Q13395 1621 aaKnown RBP6.35□□□□□ -1.39
AC008056.1-201ENST00000553322 ERICH3Q5RHP9 1530 aa6.35□□□□□ -1.39
AC008056.1-201ENST00000553322 RUSC2Q8N2Y8 1516 aa6.35□□□□□ -1.39
AC008056.1-201ENST00000553322 SPDYE4A6NLX3 237 aa6.34□□□□□ -1.39
AC008056.1-201ENST00000553322 ERCC6Q03468 1493 aa6.34□□□□□ -1.4
AC008056.1-201ENST00000553322 GOLGA3Q08378 1498 aa6.34□□□□□ -1.4
AC008056.1-201ENST00000553322 KIF27Q86VH2 1401 aa6.33□□□□□ -1.4
AC008056.1-201ENST00000553322 CUL7Q14999 1698 aa6.33□□□□□ -1.4
AC008056.1-201ENST00000553322 CUX2O14529 1486 aa6.33□□□□□ -1.4
AC008056.1-201ENST00000553322 PBRM1Q86U86 1689 aa6.33□□□□□ -1.4
AC008056.1-201ENST00000553322 PDCD7Q8N8D1 485 aaKnown RBP6.32□□□□□ -1.4
AC008056.1-201ENST00000553322 PRXQ9BXM0 1461 aa6.31□□□□□ -1.4
AC008056.1-201ENST00000553322 RAD54L2Q9Y4B4 1467 aa6.31□□□□□ -1.4
AC008056.1-201ENST00000553322 IFT140Q96RY7 1462 aa6.3□□□□□ -1.4
AC008056.1-201ENST00000553322 EIF4G3O43432 1585 aaKnown RBP6.3□□□□□ -1.4
AC008056.1-201ENST00000553322 IFNL1Q8IU54 200 aa6.29□□□□□ -1.4
AC008056.1-201ENST00000553322 STK17AQ9UEE5 414 aa6.29□□□□□ -1.4
AC008056.1-201ENST00000553322 RAPGEF2Q9Y4G8 1499 aa6.28□□□□□ -1.4
AC008056.1-201ENST00000553322 ADAMTS12P58397 1594 aa6.28□□□□□ -1.4
AC008056.1-201ENST00000553322 FAM9AQ8IZU1 332 aaPredicted RBP6.28□□□□□ -1.4
AC008056.1-201ENST00000553322 CTTNBP2Q8WZ74 1663 aa6.27□□□□□ -1.41
AC008056.1-201ENST00000553322 CSRNP3Q8WYN3 585 aa6.27□□□□□ -1.41
AC008056.1-201ENST00000553322 ZSWIM6Q9HCJ5 1215 aa6.27□□□□□ -1.41
AC008056.1-201ENST00000553322 RASEFQ8IZ41 740 aa6.26□□□□□ -1.41
AC008056.1-201ENST00000553322 TNIKQ9UKE5 1360 aa6.26□□□□□ -1.41
AC008056.1-201ENST00000553322 GAPVD1Q14C86 1478 aa6.26□□□□□ -1.41
AC008056.1-201ENST00000553322 CEP162Q5TB80 1403 aa6.25□□□□□ -1.41
AC008056.1-201ENST00000553322 LOC105371045A0A1W2PR82 267 aa6.24□□□□□ -1.41
AC008056.1-201ENST00000553322 GRIN2BQ13224 1484 aa6.23□□□□□ -1.41
AC008056.1-201ENST00000553322 IGF1RP08069 1367 aa6.23□□□□□ -1.41
AC008056.1-201ENST00000553322 PBX2P40425 430 aa6.23□□□□□ -1.41
AC008056.1-201ENST00000553322 ZNF608Q9ULD9 1512 aaPredicted RBP6.23□□□□□ -1.41
AC008056.1-201ENST00000553322 MAGI1Q96QZ7 1491 aaPredicted RBP6.22□□□□□ -1.41
AC008056.1-201ENST00000553322 CARMIL1Q5VZK9 1371 aa6.21□□□□□ -1.41
AC008056.1-201ENST00000553322 EHMT2Q96KQ7 1210 aa6.21□□□□□ -1.42
AC008056.1-201ENST00000553322 SNAPC4Q5SXM2 1469 aa6.21□□□□□ -1.42
AC008056.1-201ENST00000553322 EFCAB5A4FU69 1503 aa6.2□□□□□ -1.42
AC008056.1-201ENST00000553322 TDRD9Q8NDG6 1382 aaKnown RBP6.2□□□□□ -1.42
AC008056.1-201ENST00000553322 FHAD1B1AJZ9 1412 aa6.2□□□□□ -1.42
AC008056.1-201ENST00000553322 GFRA3O60609 400 aa6.2□□□□□ -1.42
AC008056.1-201ENST00000553322 AQRO60306 1485 aaKnown RBP eCLIP6.2□□□□□ -1.42
AC008056.1-201ENST00000553322 CLIP1P30622 1438 aa6.19□□□□□ -1.42
AC008056.1-201ENST00000553322 PROM2Q8N271 834 aa6.19□□□□□ -1.42
AC008056.1-201ENST00000553322 SAMD9Q5K651 1589 aa6.18□□□□□ -1.42
AC008056.1-201ENST00000553322 KCTD12Q96CX2 325 aaKnown RBP6.18□□□□□ -1.42
AC008056.1-201ENST00000553322 SYNJ2O15056 1496 aa6.17□□□□□ -1.42
AC008056.1-201ENST00000553322 GRIN2AQ12879 1464 aa6.17□□□□□ -1.42
AC008056.1-201ENST00000553322 ARAP1Q96P48 1450 aa6.17□□□□□ -1.42
AC008056.1-201ENST00000553322 GPR153Q6NV75 609 aa6.17□□□□□ -1.42
AC008056.1-201ENST00000553322 IQGAP2Q13576 1575 aa6.17□□□□□ -1.42
AC008056.1-201ENST00000553322 ARHGAP35Q9NRY4 1499 aa6.16□□□□□ -1.42
AC008056.1-201ENST00000553322 UBTFP17480 764 aaKnown RBP6.16□□□□□ -1.42
AC008056.1-201ENST00000553322 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
AC008056.1-201ENST00000553322 VPS8Q8N3P4 1428 aa6.16□□□□□ -1.42
AC008056.1-201ENST00000553322 CEP170Q5SW79 1584 aa6.15□□□□□ -1.42
AC008056.1-201ENST00000553322 ADGRD1Q6QNK2 874 aa6.15□□□□□ -1.42
AC008056.1-201ENST00000553322 CHD1O14646 1710 aa6.15□□□□□ -1.42
AC008056.1-201ENST00000553322 CFAP43Q8NDM7 1665 aa6.14□□□□□ -1.43
AC008056.1-201ENST00000553322 ZNF316A6NFI3 1004 aaPredicted RBP6.14□□□□□ -1.43
AC008056.1-201ENST00000553322 LCE2AQ5TA79 106 aaPredicted RBP6.14□□□□□ -1.43
AC008056.1-201ENST00000553322 TREML4Q6UXN2 200 aa6.14□□□□□ -1.43
AC008056.1-201ENST00000553322 UGGT2Q9NYU1 1516 aa6.14□□□□□ -1.43
AC008056.1-201ENST00000553322 PCF11O94913 1555 aaKnown RBP6.14□□□□□ -1.43
AC008056.1-201ENST00000553322 NUP160Q12769 1436 aa6.13□□□□□ -1.43
AC008056.1-201ENST00000553322 KIAA0556O60303 1618 aa6.13□□□□□ -1.43
AC008056.1-201ENST00000553322 KIAA0586Q9BVV6 1533 aa6.11□□□□□ -1.43
AC008056.1-201ENST00000553322 FYCO1Q9BQS8 1478 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms