RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 PRDM2Q13029 1718 aa14.59□□□□□ -0.07
LINC02407-202ENST00000553247 MIER1Q8N108 512 aa14.59□□□□□ -0.07
LINC02407-202ENST00000553247 PLA2G2EQ9NZK7 142 aa14.59□□□□□ -0.07
LINC02407-202ENST00000553247 HOXB3P14651 431 aaPredicted RBP14.57□□□□□ -0.08
LINC02407-202ENST00000553247 ZNF710Q8N1W2 664 aa14.57□□□□□ -0.08
LINC02407-202ENST00000553247 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
LINC02407-202ENST00000553247 SUPT5HO00267 1087 aaKnown RBP14.55□□□□□ -0.08
LINC02407-202ENST00000553247 VARS2Q5ST30 1063 aaKnown RBP14.54□□□□□ -0.08
LINC02407-202ENST00000553247 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
LINC02407-202ENST00000553247 ZNF687Q8N1G0 1237 aa14.49□□□□□ -0.09
LINC02407-202ENST00000553247 IFT140Q96RY7 1462 aa14.48□□□□□ -0.09
LINC02407-202ENST00000553247 DNMBPQ6XZF7 1577 aa14.46□□□□□ -0.09
LINC02407-202ENST00000553247 NUBP1P53384 320 aa14.43□□□□□ -0.1
LINC02407-202ENST00000553247 DOK7Q18PE1 504 aa14.43□□□□□ -0.1
LINC02407-202ENST00000553247 ZNF608Q9ULD9 1512 aaPredicted RBP14.41□□□□□ -0.1
LINC02407-202ENST00000553247 PROM2Q8N271 834 aa14.4□□□□□ -0.1
LINC02407-202ENST00000553247 FAM212AQ96EL1 285 aa14.39□□□□□ -0.11
LINC02407-202ENST00000553247 MKRN3Q13064 507 aaKnown RBP14.38□□□□□ -0.11
LINC02407-202ENST00000553247 ANKRD13DQ6ZTN6 518 aa14.38□□□□□ -0.11
LINC02407-202ENST00000553247 POLA1P09884 1462 aaPredicted RBP14.38□□□□□ -0.11
LINC02407-202ENST00000553247 TARBP1Q13395 1621 aaKnown RBP14.36□□□□□ -0.11
LINC02407-202ENST00000553247 SOGA1O94964 1423 aa14.35□□□□□ -0.11
LINC02407-202ENST00000553247 RIMBP2O15034 1052 aa14.34□□□□□ -0.11
LINC02407-202ENST00000553247 GOLGA2Q08379 1002 aa14.34□□□□□ -0.11
LINC02407-202ENST00000553247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
LINC02407-202ENST00000553247 CUX1P39880 1505 aa14.33□□□□□ -0.12
LINC02407-202ENST00000553247 AQRO60306 1485 aaKnown RBP eCLIP14.32□□□□□ -0.12
LINC02407-202ENST00000553247 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
LINC02407-202ENST00000553247 HCSTQ9UBK5 93 aa14.3□□□□□ -0.12
LINC02407-202ENST00000553247 PCDHB8Q9UN66 801 aa14.3□□□□□ -0.12
LINC02407-202ENST00000553247 FGD5Q6ZNL6 1462 aa14.3□□□□□ -0.12
LINC02407-202ENST00000553247 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
LINC02407-202ENST00000553247 TDRD9Q8NDG6 1382 aaKnown RBP14.29□□□□□ -0.12
LINC02407-202ENST00000553247 EIF4G3O43432 1585 aaKnown RBP14.27□□□□□ -0.12
LINC02407-202ENST00000553247 PLCD3Q8N3E9 789 aa14.27□□□□□ -0.13
LINC02407-202ENST00000553247 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
LINC02407-202ENST00000553247 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
LINC02407-202ENST00000553247 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
LINC02407-202ENST00000553247 WDR97A6NE52 1622 aa14.24□□□□□ -0.13
LINC02407-202ENST00000553247 IRX2Q9BZI1 471 aaPredicted RBP14.24□□□□□ -0.13
LINC02407-202ENST00000553247 G3V3G9 751 aa14.23□□□□□ -0.13
LINC02407-202ENST00000553247 DCAF8Q5TAQ9 597 aa14.23□□□□□ -0.13
LINC02407-202ENST00000553247 PYGBP11216 843 aa14.22□□□□□ -0.13
LINC02407-202ENST00000553247 WRNQ14191 1432 aaPredicted RBP eCLIP14.2□□□□□ -0.14
LINC02407-202ENST00000553247 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
LINC02407-202ENST00000553247 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
LINC02407-202ENST00000553247 LSM11P83369 360 aaKnown RBP eCLIP14.18□□□□□ -0.14
LINC02407-202ENST00000553247 ZSWIM6Q9HCJ5 1215 aa14.18□□□□□ -0.14
LINC02407-202ENST00000553247 DPY19L2Q6NUT2 758 aa14.17□□□□□ -0.14
LINC02407-202ENST00000553247 BOLA1Q9Y3E2 137 aa14.17□□□□□ -0.14
LINC02407-202ENST00000553247 TOP2BQ02880 1626 aa14.16□□□□□ -0.14
LINC02407-202ENST00000553247 GAPVD1Q14C86 1478 aa14.16□□□□□ -0.14
LINC02407-202ENST00000553247 MAGI1Q96QZ7 1491 aaPredicted RBP14.16□□□□□ -0.14
LINC02407-202ENST00000553247 ILDR1Q86SU0 546 aaPredicted RBP14.15□□□□□ -0.14
LINC02407-202ENST00000553247 CHMP7Q8WUX9 453 aaPredicted RBP14.15□□□□□ -0.14
LINC02407-202ENST00000553247 BIVM-ERCC5R4GMW8 1640 aa14.14□□□□□ -0.15
LINC02407-202ENST00000553247 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
LINC02407-202ENST00000553247 SYNJ1O43426 1573 aa14.12□□□□□ -0.15
LINC02407-202ENST00000553247 RGS20O76081 388 aa14.11□□□□□ -0.15
LINC02407-202ENST00000553247 SYNJ2O15056 1496 aa14.11□□□□□ -0.15
LINC02407-202ENST00000553247 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
LINC02407-202ENST00000553247 CHD1O14646 1710 aa14.1□□□□□ -0.15
LINC02407-202ENST00000553247 ABCA5Q8WWZ7 1642 aa14.09□□□□□ -0.15
LINC02407-202ENST00000553247 GPR153Q6NV75 609 aa14.08□□□□□ -0.16
LINC02407-202ENST00000553247 PBRM1Q86U86 1689 aa14.03□□□□□ -0.16
LINC02407-202ENST00000553247 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.16
LINC02407-202ENST00000553247 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.17
LINC02407-202ENST00000553247 ERICH3Q5RHP9 1530 aa14.01□□□□□ -0.17
LINC02407-202ENST00000553247 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
LINC02407-202ENST00000553247 ZNF467Q7Z7K2 595 aaPredicted RBP14.01□□□□□ -0.17
LINC02407-202ENST00000553247 GRIN2AQ12879 1464 aa13.98□□□□□ -0.17
LINC02407-202ENST00000553247 NUP160Q12769 1436 aa13.97□□□□□ -0.17
LINC02407-202ENST00000553247 IGF1RP08069 1367 aa13.96□□□□□ -0.17
LINC02407-202ENST00000553247 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
LINC02407-202ENST00000553247 ADAMTS12P58397 1594 aa13.95□□□□□ -0.18
LINC02407-202ENST00000553247 ZNF316A6NFI3 1004 aaPredicted RBP13.94□□□□□ -0.18
LINC02407-202ENST00000553247 KIF27Q86VH2 1401 aa13.93□□□□□ -0.18
LINC02407-202ENST00000553247 PSEN1P49768 467 aa13.92□□□□□ -0.18
LINC02407-202ENST00000553247 PBX2P40425 430 aa13.91□□□□□ -0.18
LINC02407-202ENST00000553247 ARSIQ5FYB1 569 aa13.89□□□□□ -0.19
LINC02407-202ENST00000553247 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
LINC02407-202ENST00000553247 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
LINC02407-202ENST00000553247 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.19
LINC02407-202ENST00000553247 SHROOM2Q13796 1616 aa13.83□□□□□ -0.2
LINC02407-202ENST00000553247 Q6ZNB5 142 aa13.83□□□□□ -0.2
LINC02407-202ENST00000553247 KIAA0586Q9BVV6 1533 aa13.8□□□□□ -0.2
LINC02407-202ENST00000553247 CUL7Q14999 1698 aa13.8□□□□□ -0.2
LINC02407-202ENST00000553247 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
LINC02407-202ENST00000553247 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
LINC02407-202ENST00000553247 ERCC6L2Q5T890 1561 aa13.79□□□□□ -0.2
LINC02407-202ENST00000553247 TMEM92Q6UXU6 159 aa13.78□□□□□ -0.2
LINC02407-202ENST00000553247 AXIN2Q9Y2T1 843 aa13.78□□□□□ -0.2
LINC02407-202ENST00000553247 IFFO2Q5TF58 517 aa13.77□□□□□ -0.21
LINC02407-202ENST00000553247 POTEEQ6S8J3 1075 aa13.76□□□□□ -0.21
LINC02407-202ENST00000553247 CABP2Q9NPB3 220 aa13.76□□□□□ -0.21
LINC02407-202ENST00000553247 ADGRD1Q6QNK2 874 aa13.75□□□□□ -0.21
LINC02407-202ENST00000553247 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.21
LINC02407-202ENST00000553247 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
LINC02407-202ENST00000553247 RAPGEF2Q9Y4G8 1499 aa13.7□□□□□ -0.22
LINC02407-202ENST00000553247 A0A0G2JS52 829 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms