RNA–Protein interactions for RNA: ENST00000548422.1

CDK17-204, Transcript of cyclin dependent kinase 17, humanhuman

TSL 3

Gene CDK17, Length 892 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-204ENST00000548422 NEUROD1Q13562 356 aa12.51□□□□□ -0.41
CDK17-204ENST00000548422 PCDHB13Q9Y5F0 798 aa12.51□□□□□ -0.41
CDK17-204ENST00000548422 POTEFA5A3E0 1075 aa12.49□□□□□ -0.41
CDK17-204ENST00000548422 ARAP1Q96P48 1450 aa12.48□□□□□ -0.41
CDK17-204ENST00000548422 RSF1Q96T23 1441 aaPredicted RBP12.48□□□□□ -0.41
CDK17-204ENST00000548422 ATN1P54259 1190 aaPredicted RBP12.48□□□□□ -0.41
CDK17-204ENST00000548422 UBE2Q2Q8WVN8 375 aa12.47□□□□□ -0.41
CDK17-204ENST00000548422 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
CDK17-204ENST00000548422 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
CDK17-204ENST00000548422 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
CDK17-204ENST00000548422 URB2Q14146 1524 aaKnown RBP12.45□□□□□ -0.42
CDK17-204ENST00000548422 IFT140Q96RY7 1462 aa12.45□□□□□ -0.42
CDK17-204ENST00000548422 CFTRP13569 1480 aa12.44□□□□□ -0.42
CDK17-204ENST00000548422 RGL2O15211 777 aa12.43□□□□□ -0.42
CDK17-204ENST00000548422 PCDHB8Q9UN66 801 aa12.43□□□□□ -0.42
CDK17-204ENST00000548422 TRIM26Q12899 539 aaPredicted RBP12.42□□□□□ -0.42
CDK17-204ENST00000548422 IFNL1Q8IU54 200 aa12.42□□□□□ -0.42
CDK17-204ENST00000548422 RIOK3O14730 519 aaKnown RBP12.41□□□□□ -0.42
CDK17-204ENST00000548422 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
CDK17-204ENST00000548422 ZNF608Q9ULD9 1512 aaPredicted RBP12.39□□□□□ -0.43
CDK17-204ENST00000548422 ERICH6BQ5W0A0 696 aa12.38□□□□□ -0.43
CDK17-204ENST00000548422 RNF25Q96BH1 459 aaPredicted RBP12.38□□□□□ -0.43
CDK17-204ENST00000548422 ILDR1Q86SU0 546 aaPredicted RBP12.35□□□□□ -0.43
CDK17-204ENST00000548422 VGFO15240 615 aaPredicted RBP12.34□□□□□ -0.43
CDK17-204ENST00000548422 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
CDK17-204ENST00000548422 CHD1O14646 1710 aa12.34□□□□□ -0.43
CDK17-204ENST00000548422 MMRN1Q13201 1228 aa12.33□□□□□ -0.44
CDK17-204ENST00000548422 TRPC6Q9Y210 931 aa12.33□□□□□ -0.44
CDK17-204ENST00000548422 EIF4G3O43432 1585 aaKnown RBP12.32□□□□□ -0.44
CDK17-204ENST00000548422 PDAP1Q13442 181 aaKnown RBP12.32□□□□□ -0.44
CDK17-204ENST00000548422 PSEN1P49768 467 aa12.31□□□□□ -0.44
CDK17-204ENST00000548422 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
CDK17-204ENST00000548422 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
CDK17-204ENST00000548422 ST18O60284 1047 aa12.28□□□□□ -0.44
CDK17-204ENST00000548422 TIE1P35590 1138 aa12.28□□□□□ -0.44
CDK17-204ENST00000548422 WIZO95785 1651 aa12.28□□□□□ -0.44
CDK17-204ENST00000548422 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
CDK17-204ENST00000548422 SPNS2Q8IVW8 549 aa12.27□□□□□ -0.45
CDK17-204ENST00000548422 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
CDK17-204ENST00000548422 TMEM106CQ9BVX2 250 aa12.27□□□□□ -0.45
CDK17-204ENST00000548422 PRDM2Q13029 1718 aa12.26□□□□□ -0.45
CDK17-204ENST00000548422 STK25O00506 426 aa12.25□□□□□ -0.45
CDK17-204ENST00000548422 TOPBP1Q92547 1522 aa12.25□□□□□ -0.45
CDK17-204ENST00000548422 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
CDK17-204ENST00000548422 GOLGA2Q08379 1002 aa12.22□□□□□ -0.45
CDK17-204ENST00000548422 STK24Q9Y6E0 443 aa12.22□□□□□ -0.45
CDK17-204ENST00000548422 AQRO60306 1485 aaKnown RBP eCLIP12.21□□□□□ -0.451e-7■■■■□ 25.3
CDK17-204ENST00000548422 TTLL13PA6NNM8 815 aa12.21□□□□□ -0.45
CDK17-204ENST00000548422 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.45
CDK17-204ENST00000548422 SYNJ1O43426 1573 aa12.21□□□□□ -0.46
CDK17-204ENST00000548422 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.46
CDK17-204ENST00000548422 SEC24BO95487 1268 aa12.2□□□□□ -0.46
CDK17-204ENST00000548422 HS6ST3Q8IZP7 471 aa12.17□□□□□ -0.46
CDK17-204ENST00000548422 SLAIN1Q8ND83 568 aa12.17□□□□□ -0.46
CDK17-204ENST00000548422 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
CDK17-204ENST00000548422 TARBP1Q13395 1621 aaKnown RBP12.17□□□□□ -0.46
CDK17-204ENST00000548422 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
CDK17-204ENST00000548422 CHMP7Q8WUX9 453 aaPredicted RBP12.16□□□□□ -0.46
CDK17-204ENST00000548422 TRIM35Q9UPQ4 493 aa12.16□□□□□ -0.46
CDK17-204ENST00000548422 GAPVD1Q14C86 1478 aa12.15□□□□□ -0.46
CDK17-204ENST00000548422 TOP2AP11388 1531 aaKnown RBP12.15□□□□□ -0.46
CDK17-204ENST00000548422 MKRN3Q13064 507 aaKnown RBP12.13□□□□□ -0.47
CDK17-204ENST00000548422 WDR97A6NE52 1622 aa12.12□□□□□ -0.47
CDK17-204ENST00000548422 MAGI1Q96QZ7 1491 aaPredicted RBP12.11□□□□□ -0.47
CDK17-204ENST00000548422 SNAPC4Q5SXM2 1469 aa12.09□□□□□ -0.47
CDK17-204ENST00000548422 EFCAB3Q8N7B9 438 aa12.09□□□□□ -0.47
CDK17-204ENST00000548422 TSHZ2Q9NRE2 1034 aa12.07□□□□□ -0.48
CDK17-204ENST00000548422 POLA1P09884 1462 aaPredicted RBP12.07□□□□□ -0.48
CDK17-204ENST00000548422 DIEXFQ68CQ4 756 aaKnown RBP12.06□□□□□ -0.48
CDK17-204ENST00000548422 SYNJ2O15056 1496 aa12.06□□□□□ -0.48
CDK17-204ENST00000548422 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
CDK17-204ENST00000548422 IER5LQ5T953 404 aa12.05□□□□□ -0.48
CDK17-204ENST00000548422 BBXQ8WY36 941 aaPredicted RBP12.05□□□□□ -0.48
CDK17-204ENST00000548422 SOGA1O94964 1423 aa12.04□□□□□ -0.48
CDK17-204ENST00000548422 KDM4FA0A1W2PPD8 638 aa12.04□□□□□ -0.48
CDK17-204ENST00000548422 SOX12O15370 315 aa12.03□□□□□ -0.48
CDK17-204ENST00000548422 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
CDK17-204ENST00000548422 GRIN2BQ13224 1484 aa12.02□□□□□ -0.48
CDK17-204ENST00000548422 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDK17-204ENST00000548422 MARVELD3Q96A59 401 aa12.01□□□□□ -0.49
CDK17-204ENST00000548422 PKNOX2Q96KN3 472 aa12.01□□□□□ -0.49
CDK17-204ENST00000548422 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
CDK17-204ENST00000548422 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
CDK17-204ENST00000548422 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
CDK17-204ENST00000548422 CCDC88BA6NC98 1476 aa11.99□□□□□ -0.49
CDK17-204ENST00000548422 RAD54L2Q9Y4B4 1467 aa11.99□□□□□ -0.49
CDK17-204ENST00000548422 ERCC6L2Q5T890 1561 aa11.98□□□□□ -0.49
CDK17-204ENST00000548422 PLCG2P16885 1265 aa11.98□□□□□ -0.49
CDK17-204ENST00000548422 NLRP6P59044 892 aa11.98□□□□□ -0.49
CDK17-204ENST00000548422 PODXL2Q9NZ53 605 aa11.98□□□□□ -0.49
CDK17-204ENST00000548422 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
CDK17-204ENST00000548422 OCEL1Q9H607 264 aa11.97□□□□□ -0.49
CDK17-204ENST00000548422 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.49
CDK17-204ENST00000548422 RYDENQ9NUL5 291 aaKnown RBP11.96□□□□□ -0.49
CDK17-204ENST00000548422 RANGAP1P46060 587 aaPredicted RBP11.95□□□□□ -0.5
CDK17-204ENST00000548422 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
CDK17-204ENST00000548422 MFRPQ9BY79 579 aa11.95□□□□□ -0.5
CDK17-204ENST00000548422 NEFLP07196 543 aa11.94□□□□□ -0.5
CDK17-204ENST00000548422 ARXQ96QS3 562 aa11.94□□□□□ -0.5
CDK17-204ENST00000548422 KDM6BO15054 1643 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms