RNA–Protein interactions for RNA: ENST00000548422.1

CDK17-204, Transcript of cyclin dependent kinase 17, humanhuman

TSL 3

Gene CDK17, Length 892 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-204ENST00000548422 AEBP2Q6ZN18 517 aaPredicted RBP26.43■■□□□ 1.82
CDK17-204ENST00000548422 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
CDK17-204ENST00000548422 SENP3Q9H4L4 574 aaPredicted RBP22.57■■□□□ 1.2
CDK17-204ENST00000548422 PHF23Q9BUL5 403 aaPredicted RBP22.19■■□□□ 1.14
CDK17-204ENST00000548422 FOXD1Q16676 465 aa21.22■□□□□ 0.99
CDK17-204ENST00000548422 POTEDQ86YR6 584 aa21.19■□□□□ 0.98
CDK17-204ENST00000548422 MSH5O43196 834 aa20.1■□□□□ 0.81
CDK17-204ENST00000548422 PLPPR3Q6T4P5 718 aa19.6■□□□□ 0.73
CDK17-204ENST00000548422 PIAS4Q8N2W9 510 aaPredicted RBP19.59■□□□□ 0.73
CDK17-204ENST00000548422 PPP6R1Q9UPN7 881 aa19.2■□□□□ 0.66
CDK17-204ENST00000548422 ADRA2BP18089 450 aa19.08■□□□□ 0.64
CDK17-204ENST00000548422 CACNB1Q02641 598 aaPredicted RBP17.81■□□□□ 0.44
CDK17-204ENST00000548422 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
CDK17-204ENST00000548422 DMRT2Q9Y5R5 561 aa17.79■□□□□ 0.44
CDK17-204ENST00000548422 SCAF1Q9H7N4 1312 aaKnown RBP17.31■□□□□ 0.36
CDK17-204ENST00000548422 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
CDK17-204ENST00000548422 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
CDK17-204ENST00000548422 RNF39Q9H2S5 420 aa17.12■□□□□ 0.33
CDK17-204ENST00000548422 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
CDK17-204ENST00000548422 KCNA4P22459 653 aa16.83■□□□□ 0.28
CDK17-204ENST00000548422 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
CDK17-204ENST00000548422 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
CDK17-204ENST00000548422 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
CDK17-204ENST00000548422 NPM3O75607 178 aaKnown RBP16.54■□□□□ 0.24
CDK17-204ENST00000548422 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
CDK17-204ENST00000548422 POTEHQ6S545 545 aa16.41■□□□□ 0.22
CDK17-204ENST00000548422 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
CDK17-204ENST00000548422 NISCHQ9Y2I1 1504 aa16.27■□□□□ 0.2
CDK17-204ENST00000548422 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
CDK17-204ENST00000548422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDK17-204ENST00000548422 DSG3P32926 999 aa15.75■□□□□ 0.11
CDK17-204ENST00000548422 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
CDK17-204ENST00000548422 CAPN15O75808 1086 aa15.62■□□□□ 0.09
CDK17-204ENST00000548422 EHMT2Q96KQ7 1210 aa15.62■□□□□ 0.09
CDK17-204ENST00000548422 U3KPZ7 1027 aaPredicted RBP15.6■□□□□ 0.09
CDK17-204ENST00000548422 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
CDK17-204ENST00000548422 FOXD4L1Q9NU39 408 aa15.52■□□□□ 0.08
CDK17-204ENST00000548422 ABCC9O60706 1549 aa15.45■□□□□ 0.06
CDK17-204ENST00000548422 ZBTB22O15209 634 aa15.44■□□□□ 0.06
CDK17-204ENST00000548422 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
CDK17-204ENST00000548422 MYCNP04198 464 aaPredicted RBP15.31■□□□□ 0.04
CDK17-204ENST00000548422 ABCB7O75027 752 aa15.23■□□□□ 0.03
CDK17-204ENST00000548422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.22■□□□□ 0.03
CDK17-204ENST00000548422 HNRNPUL2Q1KMD3 747 aaKnown RBP15.22■□□□□ 0.03
CDK17-204ENST00000548422 PELP1Q8IZL8 1130 aaKnown RBP15.2■□□□□ 0.02
CDK17-204ENST00000548422 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
CDK17-204ENST00000548422 MYT1Q01538 1121 aa15.15■□□□□ 0.02
CDK17-204ENST00000548422 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
CDK17-204ENST00000548422 APLP2Q06481 763 aa15.09■□□□□ 0.01
CDK17-204ENST00000548422 CHRDL2Q6WN34 429 aa15.05■□□□□ -0
CDK17-204ENST00000548422 ZNF219Q9P2Y4 722 aaPredicted RBP15.04■□□□□ -0
CDK17-204ENST00000548422 ATXN8OSP0DMR3 200 aa14.97□□□□□ -0.01
CDK17-204ENST00000548422 RBM42Q9BTD8 480 aaKnown RBP14.97□□□□□ -0.01
CDK17-204ENST00000548422 SP7Q8TDD2 431 aaPredicted RBP14.96□□□□□ -0.01
CDK17-204ENST00000548422 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
CDK17-204ENST00000548422 ATF5Q9Y2D1 282 aaPredicted RBP14.86□□□□□ -0.03
CDK17-204ENST00000548422 TTBK1Q5TCY1 1321 aaPredicted RBP14.66□□□□□ -0.06
CDK17-204ENST00000548422 POLA2Q14181 598 aa14.6□□□□□ -0.07
CDK17-204ENST00000548422 RB1CC1Q8TDY2 1594 aa14.53□□□□□ -0.08
CDK17-204ENST00000548422 PIP4P2Q8N4L2 257 aa14.53□□□□□ -0.08
CDK17-204ENST00000548422 HAX1O00165 279 aa14.47□□□□□ -0.09
CDK17-204ENST00000548422 AKT1S1Q96B36 256 aa14.46□□□□□ -0.09
CDK17-204ENST00000548422 REM2Q8IYK8 340 aaPredicted RBP14.38□□□□□ -0.11
CDK17-204ENST00000548422 DNAJC5Q9H3Z4 198 aa14.38□□□□□ -0.11
CDK17-204ENST00000548422 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
CDK17-204ENST00000548422 FBLN2P98095 1184 aa14.33□□□□□ -0.12
CDK17-204ENST00000548422 EVX2Q03828 476 aa14.32□□□□□ -0.12
CDK17-204ENST00000548422 NACADO15069 1562 aa14.29□□□□□ -0.12
CDK17-204ENST00000548422 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.12
CDK17-204ENST00000548422 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
CDK17-204ENST00000548422 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDK17-204ENST00000548422 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
CDK17-204ENST00000548422 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
CDK17-204ENST00000548422 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
CDK17-204ENST00000548422 CECR2Q9BXF3 1484 aa14.04□□□□□ -0.16
CDK17-204ENST00000548422 LHX8Q68G74 356 aa14.02□□□□□ -0.17
CDK17-204ENST00000548422 BICRAQ9NZM4 1560 aa14.01□□□□□ -0.17
CDK17-204ENST00000548422 DCAF8L2P0C7V8 631 aa13.99□□□□□ -0.17
CDK17-204ENST00000548422 FKBP8Q14318 412 aa13.97□□□□□ -0.17
CDK17-204ENST00000548422 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
CDK17-204ENST00000548422 SPDYE2BA6NHP3 402 aa13.96□□□□□ -0.17
CDK17-204ENST00000548422 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.17
CDK17-204ENST00000548422 SPDYE6P0CI01 402 aa13.96□□□□□ -0.17
CDK17-204ENST00000548422 SPDYE2Q495Y8 402 aa13.96□□□□□ -0.17
CDK17-204ENST00000548422 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
CDK17-204ENST00000548422 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
CDK17-204ENST00000548422 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
CDK17-204ENST00000548422 PLSCR2Q9NRY7 297 aa13.88□□□□□ -0.19
CDK17-204ENST00000548422 GABBR2O75899 941 aa13.87□□□□□ -0.19
CDK17-204ENST00000548422 C19orf67A6NJJ6 358 aa13.86□□□□□ -0.19
CDK17-204ENST00000548422 PRKAR2AP13861 404 aaKnown RBP13.86□□□□□ -0.19
CDK17-204ENST00000548422 SSUH2Q9Y2M2 353 aa13.8□□□□□ -0.2
CDK17-204ENST00000548422 EIF4G1Q04637 1599 aaKnown RBP13.77□□□□□ -0.21
CDK17-204ENST00000548422 HRCP23327 699 aa13.73□□□□□ -0.21
CDK17-204ENST00000548422 CUX2O14529 1486 aa13.69□□□□□ -0.22
CDK17-204ENST00000548422 ERICH6Q7L0X2 663 aa13.69□□□□□ -0.22
CDK17-204ENST00000548422 CLEC11AQ9Y240 323 aa13.68□□□□□ -0.22
CDK17-204ENST00000548422 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
CDK17-204ENST00000548422 PROM2Q8N271 834 aa13.61□□□□□ -0.23
CDK17-204ENST00000548422 SPDYE1Q8NFV5 336 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms