RNA–Protein interactions for RNA: ENST00000547461.2

TCTN1-220, Transcript of tectonic family member 1, humanhuman

TSL 3

Gene TCTN1, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN1-220ENST00000547461 PKD2Q13563 968 aa12.12□□□□□ -0.47
TCTN1-220ENST00000547461 OCEL1Q9H607 264 aa12.12□□□□□ -0.47
TCTN1-220ENST00000547461 CCDC88BA6NC98 1476 aa12.12□□□□□ -0.47
TCTN1-220ENST00000547461 ARAP1Q96P48 1450 aa12.12□□□□□ -0.47
TCTN1-220ENST00000547461 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
TCTN1-220ENST00000547461 MKRN3Q13064 507 aaKnown RBP12.1□□□□□ -0.47
TCTN1-220ENST00000547461 TOPBP1Q92547 1522 aa12.08□□□□□ -0.48
TCTN1-220ENST00000547461 VGFO15240 615 aaPredicted RBP12.08□□□□□ -0.48
TCTN1-220ENST00000547461 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
TCTN1-220ENST00000547461 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
TCTN1-220ENST00000547461 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
TCTN1-220ENST00000547461 PDCD7Q8N8D1 485 aaKnown RBP12.06□□□□□ -0.48
TCTN1-220ENST00000547461 AQRO60306 1485 aaKnown RBP eCLIP12.05□□□□□ -0.48
TCTN1-220ENST00000547461 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
TCTN1-220ENST00000547461 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
TCTN1-220ENST00000547461 ZFP91Q96JP5 570 aaPredicted RBP12.03□□□□□ -0.48
TCTN1-220ENST00000547461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.49
TCTN1-220ENST00000547461 TAOK2Q9UL54 1235 aa12.02□□□□□ -0.49
TCTN1-220ENST00000547461 EIF4G3O43432 1585 aaKnown RBP11.99□□□□□ -0.49
TCTN1-220ENST00000547461 DNMBPQ6XZF7 1577 aa11.99□□□□□ -0.49
TCTN1-220ENST00000547461 CHD1O14646 1710 aa11.98□□□□□ -0.49
TCTN1-220ENST00000547461 TDRD9Q8NDG6 1382 aaKnown RBP11.98□□□□□ -0.49
TCTN1-220ENST00000547461 RGL2O15211 777 aa11.98□□□□□ -0.49
TCTN1-220ENST00000547461 EFCAB3Q8N7B9 438 aa11.98□□□□□ -0.49
TCTN1-220ENST00000547461 CHMP7Q8WUX9 453 aaPredicted RBP11.98□□□□□ -0.49
TCTN1-220ENST00000547461 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
TCTN1-220ENST00000547461 SOGA1O94964 1423 aa11.96□□□□□ -0.49
TCTN1-220ENST00000547461 POLA1P09884 1462 aaPredicted RBP11.95□□□□□ -0.5
TCTN1-220ENST00000547461 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
TCTN1-220ENST00000547461 L3MBTL3Q96JM7 780 aaPredicted RBP11.94□□□□□ -0.5
TCTN1-220ENST00000547461 SOX12O15370 315 aa11.92□□□□□ -0.5
TCTN1-220ENST00000547461 BCL11BQ9C0K0 894 aaPredicted RBP11.92□□□□□ -0.5
TCTN1-220ENST00000547461 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
TCTN1-220ENST00000547461 DPY19L2Q6NUT2 758 aa11.9□□□□□ -0.5
TCTN1-220ENST00000547461 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
TCTN1-220ENST00000547461 STK25O00506 426 aa11.87□□□□□ -0.51
TCTN1-220ENST00000547461 SLAIN1Q8ND83 568 aa11.87□□□□□ -0.51
TCTN1-220ENST00000547461 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.87□□□□□ -0.51
TCTN1-220ENST00000547461 STK24Q9Y6E0 443 aa11.87□□□□□ -0.51
TCTN1-220ENST00000547461 FGD5Q6ZNL6 1462 aa11.86□□□□□ -0.51
TCTN1-220ENST00000547461 GRIN2BQ13224 1484 aa11.84□□□□□ -0.51
TCTN1-220ENST00000547461 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
TCTN1-220ENST00000547461 MS4A4AQ96JQ5 239 aa11.84□□□□□ -0.51
TCTN1-220ENST00000547461 BOLA1Q9Y3E2 137 aa11.84□□□□□ -0.51
TCTN1-220ENST00000547461 TMEM121BQ9BXQ6 578 aaPredicted RBP11.83□□□□□ -0.52
TCTN1-220ENST00000547461 PHF8Q9UPP1 1060 aa11.83□□□□□ -0.52
TCTN1-220ENST00000547461 MAGI1Q96QZ7 1491 aaPredicted RBP11.83□□□□□ -0.52
TCTN1-220ENST00000547461 SYNJ1O43426 1573 aa11.82□□□□□ -0.52
TCTN1-220ENST00000547461 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
TCTN1-220ENST00000547461 CUX1P39880 1505 aa11.81□□□□□ -0.52
TCTN1-220ENST00000547461 NLRP6P59044 892 aa11.8□□□□□ -0.52
TCTN1-220ENST00000547461 SYNJ2O15056 1496 aa11.8□□□□□ -0.52
TCTN1-220ENST00000547461 LCE2DQ5TA82 110 aaPredicted RBP11.79□□□□□ -0.52
TCTN1-220ENST00000547461 MFRPQ9BY79 579 aa11.79□□□□□ -0.52
TCTN1-220ENST00000547461 CLASP1Q7Z460 1538 aa11.79□□□□□ -0.52
TCTN1-220ENST00000547461 GAPVD1Q14C86 1478 aa11.78□□□□□ -0.52
TCTN1-220ENST00000547461 G3V3G9 751 aa11.78□□□□□ -0.52
TCTN1-220ENST00000547461 KDM4FA0A1W2PPD8 638 aa11.77□□□□□ -0.53
TCTN1-220ENST00000547461 SUPT5HO00267 1087 aaKnown RBP11.77□□□□□ -0.53
TCTN1-220ENST00000547461 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
TCTN1-220ENST00000547461 WDR97A6NE52 1622 aa11.76□□□□□ -0.53
TCTN1-220ENST00000547461 MICALL2Q8IY33 904 aa11.75□□□□□ -0.53
TCTN1-220ENST00000547461 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
TCTN1-220ENST00000547461 SNPHO15079 494 aa11.71□□□□□ -0.53
TCTN1-220ENST00000547461 ABCA10Q8WWZ4 1543 aa11.7□□□□□ -0.54
TCTN1-220ENST00000547461 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
TCTN1-220ENST00000547461 POTEMA6NI47 508 aa11.69□□□□□ -0.54
TCTN1-220ENST00000547461 CHGAP10645 457 aaKnown RBP11.68□□□□□ -0.54
TCTN1-220ENST00000547461 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
TCTN1-220ENST00000547461 GRIN2AQ12879 1464 aa11.66□□□□□ -0.54
TCTN1-220ENST00000547461 KIF13AQ9H1H9 1805 aa11.66□□□□□ -0.54
TCTN1-220ENST00000547461 ST18O60284 1047 aa11.66□□□□□ -0.54
TCTN1-220ENST00000547461 FAM69CQ0P6D2 419 aa11.65□□□□□ -0.54
TCTN1-220ENST00000547461 PBRM1Q86U86 1689 aa11.65□□□□□ -0.55
TCTN1-220ENST00000547461 TMEM92Q6UXU6 159 aa11.64□□□□□ -0.55
TCTN1-220ENST00000547461 FBXO41Q8TF61 875 aa11.64□□□□□ -0.55
TCTN1-220ENST00000547461 ERCC6L2Q5T890 1561 aa11.63□□□□□ -0.55
TCTN1-220ENST00000547461 FHAD1B1AJZ9 1412 aa11.63□□□□□ -0.55
TCTN1-220ENST00000547461 NUP160Q12769 1436 aa11.62□□□□□ -0.55
TCTN1-220ENST00000547461 ABCA5Q8WWZ7 1642 aa11.62□□□□□ -0.55
TCTN1-220ENST00000547461 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
TCTN1-220ENST00000547461 CEP170Q5SW79 1584 aa11.6□□□□□ -0.55
TCTN1-220ENST00000547461 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
TCTN1-220ENST00000547461 PRG4Q92954 1404 aaPredicted RBP11.6□□□□□ -0.55
TCTN1-220ENST00000547461 ADAMTS12P58397 1594 aa11.58□□□□□ -0.55
TCTN1-220ENST00000547461 KDM6BO15054 1643 aa11.58□□□□□ -0.56
TCTN1-220ENST00000547461 PPP1R37O75864 691 aa11.58□□□□□ -0.56
TCTN1-220ENST00000547461 HOXB3P14651 431 aaPredicted RBP11.58□□□□□ -0.56
TCTN1-220ENST00000547461 AMER1Q5JTC6 1135 aaPredicted RBP11.57□□□□□ -0.56
TCTN1-220ENST00000547461 HECW2Q9P2P5 1572 aa11.56□□□□□ -0.56
TCTN1-220ENST00000547461 LMTK3Q96Q04 1460 aa11.56□□□□□ -0.56
TCTN1-220ENST00000547461 PCDH10Q9P2E7 1040 aa11.55□□□□□ -0.56
TCTN1-220ENST00000547461 TSPOAP1O95153 1857 aa11.53□□□□□ -0.56
TCTN1-220ENST00000547461 KIF3CO14782 793 aa11.53□□□□□ -0.56
TCTN1-220ENST00000547461 RYDENQ9NUL5 291 aaKnown RBP11.53□□□□□ -0.56
TCTN1-220ENST00000547461 ERICH3Q5RHP9 1530 aa11.53□□□□□ -0.56
TCTN1-220ENST00000547461 TTBK1Q5TCY1 1321 aaPredicted RBP11.53□□□□□ -0.56
TCTN1-220ENST00000547461 TOP2BQ02880 1626 aa11.53□□□□□ -0.56
TCTN1-220ENST00000547461 DOK7Q18PE1 504 aa11.52□□□□□ -0.57
TCTN1-220ENST00000547461 ADGRL1O94910 1474 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms