RNA–Protein interactions for RNA: ENST00000547461.2

TCTN1-220, Transcript of tectonic family member 1, humanhuman

TSL 3

Gene TCTN1, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN1-220ENST00000547461 AEBP2Q6ZN18 517 aaPredicted RBP25.58■■□□□ 1.69
TCTN1-220ENST00000547461 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
TCTN1-220ENST00000547461 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
TCTN1-220ENST00000547461 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
TCTN1-220ENST00000547461 FOXD1Q16676 465 aa20.24■□□□□ 0.83
TCTN1-220ENST00000547461 PLPPR3Q6T4P5 718 aa19.82■□□□□ 0.76
TCTN1-220ENST00000547461 PPP6R1Q9UPN7 881 aa19.18■□□□□ 0.66
TCTN1-220ENST00000547461 ADRA2BP18089 450 aa19.11■□□□□ 0.65
TCTN1-220ENST00000547461 PIAS4Q8N2W9 510 aaPredicted RBP18.97■□□□□ 0.63
TCTN1-220ENST00000547461 MSH5O43196 834 aa18.83■□□□□ 0.6
TCTN1-220ENST00000547461 POTEDQ86YR6 584 aa17.8■□□□□ 0.44
TCTN1-220ENST00000547461 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
TCTN1-220ENST00000547461 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
TCTN1-220ENST00000547461 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
TCTN1-220ENST00000547461 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
TCTN1-220ENST00000547461 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
TCTN1-220ENST00000547461 HOXD11P31277 338 aaPredicted RBP16.85■□□□□ 0.29
TCTN1-220ENST00000547461 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
TCTN1-220ENST00000547461 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
TCTN1-220ENST00000547461 NPM3O75607 178 aaKnown RBP16.6■□□□□ 0.25
TCTN1-220ENST00000547461 KCNA4P22459 653 aa16.56■□□□□ 0.24
TCTN1-220ENST00000547461 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
TCTN1-220ENST00000547461 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
TCTN1-220ENST00000547461 NISCHQ9Y2I1 1504 aa16.27■□□□□ 0.2
TCTN1-220ENST00000547461 RNF39Q9H2S5 420 aa16.12■□□□□ 0.17
TCTN1-220ENST00000547461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
TCTN1-220ENST00000547461 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
TCTN1-220ENST00000547461 C1QBPQ07021 282 aaKnown RBP15.9■□□□□ 0.14
TCTN1-220ENST00000547461 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
TCTN1-220ENST00000547461 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
TCTN1-220ENST00000547461 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
TCTN1-220ENST00000547461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
TCTN1-220ENST00000547461 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
TCTN1-220ENST00000547461 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
TCTN1-220ENST00000547461 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
TCTN1-220ENST00000547461 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
TCTN1-220ENST00000547461 APLP2Q06481 763 aa15.32■□□□□ 0.04
TCTN1-220ENST00000547461 SAMD1Q6SPF0 538 aaPredicted RBP15.32■□□□□ 0.04
TCTN1-220ENST00000547461 CAPN15O75808 1086 aa15.29■□□□□ 0.04
TCTN1-220ENST00000547461 ZBTB22O15209 634 aa15.25■□□□□ 0.03
TCTN1-220ENST00000547461 DSG3P32926 999 aa15.19■□□□□ 0.02
TCTN1-220ENST00000547461 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
TCTN1-220ENST00000547461 TRHP20396 242 aaPredicted RBP15.12■□□□□ 0.01
TCTN1-220ENST00000547461 ABCC9O60706 1549 aa15.05■□□□□ -0
TCTN1-220ENST00000547461 ABCB7O75027 752 aa14.95□□□□□ -0.02
TCTN1-220ENST00000547461 ATF5Q9Y2D1 282 aaPredicted RBP14.94□□□□□ -0.02
TCTN1-220ENST00000547461 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
TCTN1-220ENST00000547461 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
TCTN1-220ENST00000547461 POLA2Q14181 598 aa14.82□□□□□ -0.04
TCTN1-220ENST00000547461 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
TCTN1-220ENST00000547461 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
TCTN1-220ENST00000547461 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
TCTN1-220ENST00000547461 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
TCTN1-220ENST00000547461 FBLN2P98095 1184 aa14.33□□□□□ -0.12
TCTN1-220ENST00000547461 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
TCTN1-220ENST00000547461 MKRN4PQ13434 485 aaPredicted RBP14.3□□□□□ -0.12
TCTN1-220ENST00000547461 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
TCTN1-220ENST00000547461 SPDYE2BA6NHP3 402 aa14.17□□□□□ -0.14
TCTN1-220ENST00000547461 SPDYE6P0CI01 402 aa14.17□□□□□ -0.14
TCTN1-220ENST00000547461 SPDYE2Q495Y8 402 aa14.17□□□□□ -0.14
TCTN1-220ENST00000547461 DCAF8L2P0C7V8 631 aa14.08□□□□□ -0.16
TCTN1-220ENST00000547461 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
TCTN1-220ENST00000547461 RB1CC1Q8TDY2 1594 aa14.05□□□□□ -0.16
TCTN1-220ENST00000547461 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
TCTN1-220ENST00000547461 SSUH2Q9Y2M2 353 aa14.03□□□□□ -0.16
TCTN1-220ENST00000547461 CHRDL2Q6WN34 429 aa14.02□□□□□ -0.17
TCTN1-220ENST00000547461 POTEHQ6S545 545 aa14.01□□□□□ -0.17
TCTN1-220ENST00000547461 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
TCTN1-220ENST00000547461 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
TCTN1-220ENST00000547461 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
TCTN1-220ENST00000547461 NACADO15069 1562 aa13.9□□□□□ -0.18
TCTN1-220ENST00000547461 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
TCTN1-220ENST00000547461 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
TCTN1-220ENST00000547461 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
TCTN1-220ENST00000547461 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
TCTN1-220ENST00000547461 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
TCTN1-220ENST00000547461 UNC13AQ9UPW8 1703 aa13.63□□□□□ -0.23
TCTN1-220ENST00000547461 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
TCTN1-220ENST00000547461 MYO15BQ96JP2 1530 aa13.6□□□□□ -0.23
TCTN1-220ENST00000547461 BICRAQ9NZM4 1560 aa13.59□□□□□ -0.23
TCTN1-220ENST00000547461 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
TCTN1-220ENST00000547461 PROM2Q8N271 834 aa13.57□□□□□ -0.24
TCTN1-220ENST00000547461 PRKAR2AP13861 404 aaKnown RBP13.54□□□□□ -0.24
TCTN1-220ENST00000547461 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
TCTN1-220ENST00000547461 CC2D2AQ9P2K1 1620 aa13.51□□□□□ -0.25
TCTN1-220ENST00000547461 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
TCTN1-220ENST00000547461 ZCCHC6Q5VYS8 1495 aaKnown RBP13.42□□□□□ -0.26
TCTN1-220ENST00000547461 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
TCTN1-220ENST00000547461 SCRIBQ14160 1630 aa13.39□□□□□ -0.27
TCTN1-220ENST00000547461 FKBP8Q14318 412 aa13.39□□□□□ -0.27
TCTN1-220ENST00000547461 HAX1O00165 279 aa13.37□□□□□ -0.27
TCTN1-220ENST00000547461 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
TCTN1-220ENST00000547461 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
TCTN1-220ENST00000547461 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
TCTN1-220ENST00000547461 EIF4G1Q04637 1599 aaKnown RBP13.32□□□□□ -0.28
TCTN1-220ENST00000547461 C19orf67A6NJJ6 358 aa13.3□□□□□ -0.28
TCTN1-220ENST00000547461 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
TCTN1-220ENST00000547461 EVX2Q03828 476 aa13.27□□□□□ -0.29
TCTN1-220ENST00000547461 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
TCTN1-220ENST00000547461 CUX2O14529 1486 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms