RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 PDAP1Q13442 181 aaKnown RBP11.52□□□□□ -0.57
LDHC-209ENST00000545848 GOLGA2Q08379 1002 aa11.5□□□□□ -0.57
LDHC-209ENST00000545848 POLA1P09884 1462 aaPredicted RBP11.49□□□□□ -0.57
LDHC-209ENST00000545848 ABCC8Q09428 1581 aa11.49□□□□□ -0.57
LDHC-209ENST00000545848 RAD54L2Q9Y4B4 1467 aa11.48□□□□□ -0.57
LDHC-209ENST00000545848 CHD1O14646 1710 aa11.47□□□□□ -0.57
LDHC-209ENST00000545848 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
LDHC-209ENST00000545848 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
LDHC-209ENST00000545848 OCEL1Q9H607 264 aa11.47□□□□□ -0.57
LDHC-209ENST00000545848 DNAJC5Q9H3Z4 198 aa11.46□□□□□ -0.57
LDHC-209ENST00000545848 FGD5Q6ZNL6 1462 aa11.44□□□□□ -0.58
LDHC-209ENST00000545848 BIVM-ERCC5R4GMW8 1640 aa11.42□□□□□ -0.58
LDHC-209ENST00000545848 CABP2Q9NPB3 220 aa11.42□□□□□ -0.58
LDHC-209ENST00000545848 PBRM1Q86U86 1689 aa11.41□□□□□ -0.58
LDHC-209ENST00000545848 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
LDHC-209ENST00000545848 RNF25Q96BH1 459 aaPredicted RBP11.41□□□□□ -0.58
LDHC-209ENST00000545848 AQRO60306 1485 aaKnown RBP eCLIP11.4□□□□□ -0.58
LDHC-209ENST00000545848 PDCD7Q8N8D1 485 aaKnown RBP11.4□□□□□ -0.58
LDHC-209ENST00000545848 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
LDHC-209ENST00000545848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.59
LDHC-209ENST00000545848 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
LDHC-209ENST00000545848 TOP2BQ02880 1626 aa11.37□□□□□ -0.59
LDHC-209ENST00000545848 VGFO15240 615 aaPredicted RBP11.33□□□□□ -0.6
LDHC-209ENST00000545848 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
LDHC-209ENST00000545848 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
LDHC-209ENST00000545848 TDRD9Q8NDG6 1382 aaKnown RBP11.32□□□□□ -0.6
LDHC-209ENST00000545848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
LDHC-209ENST00000545848 ZFP91Q96JP5 570 aaPredicted RBP11.32□□□□□ -0.6
LDHC-209ENST00000545848 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
LDHC-209ENST00000545848 SOGA1O94964 1423 aa11.31□□□□□ -0.6
LDHC-209ENST00000545848 SNAPC4Q5SXM2 1469 aa11.31□□□□□ -0.6
LDHC-209ENST00000545848 PKD2Q13563 968 aa11.3□□□□□ -0.6
LDHC-209ENST00000545848 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
LDHC-209ENST00000545848 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
LDHC-209ENST00000545848 RIMBP3CA6NJZ7 1639 aa11.29□□□□□ -0.6
LDHC-209ENST00000545848 RIMBP3BA6NNM3 1639 aa11.29□□□□□ -0.6
LDHC-209ENST00000545848 RIMBP3Q9UFD9 1639 aa11.29□□□□□ -0.6
LDHC-209ENST00000545848 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.29□□□□□ -0.6
LDHC-209ENST00000545848 FAM163AQ96GL9 167 aaPredicted RBP11.28□□□□□ -0.6
LDHC-209ENST00000545848 ABCA10Q8WWZ4 1543 aa11.28□□□□□ -0.6
LDHC-209ENST00000545848 WRNQ14191 1432 aaPredicted RBP eCLIP11.27□□□□□ -0.6
LDHC-209ENST00000545848 DPY19L2Q6NUT2 758 aa11.27□□□□□ -0.61
LDHC-209ENST00000545848 ADAMTS12P58397 1594 aa11.26□□□□□ -0.61
LDHC-209ENST00000545848 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
LDHC-209ENST00000545848 TAOK2Q9UL54 1235 aa11.26□□□□□ -0.61
LDHC-209ENST00000545848 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
LDHC-209ENST00000545848 POTEMA6NI47 508 aa11.25□□□□□ -0.61
LDHC-209ENST00000545848 LCE2DQ5TA82 110 aaPredicted RBP11.25□□□□□ -0.61
LDHC-209ENST00000545848 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
LDHC-209ENST00000545848 GAPVD1Q14C86 1478 aa11.22□□□□□ -0.61
LDHC-209ENST00000545848 ERCC6L2Q5T890 1561 aa11.21□□□□□ -0.61
LDHC-209ENST00000545848 RGL2O15211 777 aa11.21□□□□□ -0.61
LDHC-209ENST00000545848 BCL11BQ9C0K0 894 aaPredicted RBP11.21□□□□□ -0.61
LDHC-209ENST00000545848 BOLA1Q9Y3E2 137 aa11.21□□□□□ -0.61
LDHC-209ENST00000545848 CEP170Q5SW79 1584 aa11.2□□□□□ -0.62
LDHC-209ENST00000545848 ARHGEF11O15085 1522 aa11.2□□□□□ -0.62
LDHC-209ENST00000545848 G3V3G9 751 aa11.2□□□□□ -0.62
LDHC-209ENST00000545848 SOX12O15370 315 aa11.2□□□□□ -0.62
LDHC-209ENST00000545848 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
LDHC-209ENST00000545848 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
LDHC-209ENST00000545848 MAGI1Q96QZ7 1491 aaPredicted RBP11.18□□□□□ -0.62
LDHC-209ENST00000545848 STK25O00506 426 aa11.17□□□□□ -0.62
LDHC-209ENST00000545848 PHF8Q9UPP1 1060 aa11.16□□□□□ -0.62
LDHC-209ENST00000545848 SYNJ2O15056 1496 aa11.16□□□□□ -0.62
LDHC-209ENST00000545848 ARAP1Q96P48 1450 aa11.16□□□□□ -0.62
LDHC-209ENST00000545848 ST18O60284 1047 aa11.14□□□□□ -0.63
LDHC-209ENST00000545848 MS4A4AQ96JQ5 239 aa11.14□□□□□ -0.63
LDHC-209ENST00000545848 PCDH10Q9P2E7 1040 aa11.14□□□□□ -0.63
LDHC-209ENST00000545848 RUSC2Q8N2Y8 1516 aa11.14□□□□□ -0.63
LDHC-209ENST00000545848 SNPHO15079 494 aa11.13□□□□□ -0.63
LDHC-209ENST00000545848 TMEM121BQ9BXQ6 578 aaPredicted RBP11.13□□□□□ -0.63
LDHC-209ENST00000545848 GRIN2AQ12879 1464 aa11.12□□□□□ -0.63
LDHC-209ENST00000545848 SHROOM2Q13796 1616 aa11.12□□□□□ -0.63
LDHC-209ENST00000545848 ERICH3Q5RHP9 1530 aa11.11□□□□□ -0.63
LDHC-209ENST00000545848 NLRP6P59044 892 aa11.1□□□□□ -0.63
LDHC-209ENST00000545848 MICALL2Q8IY33 904 aa11.09□□□□□ -0.63
LDHC-209ENST00000545848 FBXO22Q8NEZ5 403 aa11.08□□□□□ -0.64
LDHC-209ENST00000545848 MFRPQ9BY79 579 aa11.08□□□□□ -0.64
LDHC-209ENST00000545848 NUP160Q12769 1436 aa11.08□□□□□ -0.64
LDHC-209ENST00000545848 CUL7Q14999 1698 aa11.05□□□□□ -0.64
LDHC-209ENST00000545848 FHAD1B1AJZ9 1412 aa11.04□□□□□ -0.64
LDHC-209ENST00000545848 IGF1RP08069 1367 aa11.01□□□□□ -0.65
LDHC-209ENST00000545848 TMEM92Q6UXU6 159 aa11□□□□□ -0.65
LDHC-209ENST00000545848 CHMP7Q8WUX9 453 aaPredicted RBP11□□□□□ -0.65
LDHC-209ENST00000545848 HS6ST3Q8IZP7 471 aa10.98□□□□□ -0.65
LDHC-209ENST00000545848 MARVELD3Q96A59 401 aa10.98□□□□□ -0.65
LDHC-209ENST00000545848 HOXB3P14651 431 aaPredicted RBP10.97□□□□□ -0.65
LDHC-209ENST00000545848 CTTNBP2Q8WZ74 1663 aa10.96□□□□□ -0.65
LDHC-209ENST00000545848 KIF27Q86VH2 1401 aa10.96□□□□□ -0.65
LDHC-209ENST00000545848 CDAN1Q8IWY9 1227 aa10.96□□□□□ -0.65
LDHC-209ENST00000545848 CHGAP10645 457 aaKnown RBP10.95□□□□□ -0.66
LDHC-209ENST00000545848 CYB5RLQ6IPT4 315 aa10.94□□□□□ -0.66
LDHC-209ENST00000545848 DOK7Q18PE1 504 aa10.93□□□□□ -0.66
LDHC-209ENST00000545848 ADCY10Q96PN6 1610 aa10.93□□□□□ -0.66
LDHC-209ENST00000545848 KIF13AQ9H1H9 1805 aa10.93□□□□□ -0.66
LDHC-209ENST00000545848 EMP3P54852 163 aa10.92□□□□□ -0.66
LDHC-209ENST00000545848 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
LDHC-209ENST00000545848 PRG4Q92954 1404 aaPredicted RBP10.9□□□□□ -0.66
LDHC-209ENST00000545848 IQGAP2Q13576 1575 aa10.9□□□□□ -0.67
LDHC-209ENST00000545848 PPP1R37O75864 691 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms