RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 KDM6BO15054 1643 aa17.58■□□□□ 0.4
PAAF1-215ENST00000544909 DDX10Q13206 875 aaKnown RBP17.58■□□□□ 0.4
PAAF1-215ENST00000544909 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
PAAF1-215ENST00000544909 ABCA8O94911 1581 aa17.57■□□□□ 0.4
PAAF1-215ENST00000544909 ANP32CO43423 234 aa17.57■□□□□ 0.4
PAAF1-215ENST00000544909 MPHOSPH9Q99550 1183 aa17.57■□□□□ 0.4
PAAF1-215ENST00000544909 RRP7BPQ9NSQ0 103 aa17.57■□□□□ 0.4
PAAF1-215ENST00000544909 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
PAAF1-215ENST00000544909 GPATCH8Q9UKJ3 1502 aaKnown RBP17.56■□□□□ 0.4
PAAF1-215ENST00000544909 ANKRD30BQ9BXX2 1392 aa17.56■□□□□ 0.4
PAAF1-215ENST00000544909 NCOA1Q15788 1441 aa17.53■□□□□ 0.4
PAAF1-215ENST00000544909 PLB1Q6P1J6 1458 aa17.53■□□□□ 0.4
PAAF1-215ENST00000544909 KIF14Q15058 1648 aa17.53■□□□□ 0.4
PAAF1-215ENST00000544909 TEX14Q8IWB6 1497 aa17.53■□□□□ 0.4
PAAF1-215ENST00000544909 PRG4Q92954 1404 aaPredicted RBP17.51■□□□□ 0.39
PAAF1-215ENST00000544909 TRIM52Q96A61 297 aa17.51■□□□□ 0.39
PAAF1-215ENST00000544909 JPH4Q96JJ6 628 aa17.51■□□□□ 0.39
PAAF1-215ENST00000544909 CHIC2Q9UKJ5 165 aa17.51■□□□□ 0.39
PAAF1-215ENST00000544909 ABCC10Q5T3U5 1492 aa17.49■□□□□ 0.39
PAAF1-215ENST00000544909 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
PAAF1-215ENST00000544909 ANKRD30AQ9BXX3 1397 aa17.48■□□□□ 0.39
PAAF1-215ENST00000544909 EIF4G2P78344 907 aaKnown RBP eCLIP17.48■□□□□ 0.39
PAAF1-215ENST00000544909 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
PAAF1-215ENST00000544909 PZPP20742 1482 aa17.46■□□□□ 0.39
PAAF1-215ENST00000544909 KDM5DQ9BY66 1539 aa17.46■□□□□ 0.39
PAAF1-215ENST00000544909 ARHGEF5Q12774 1597 aa17.46■□□□□ 0.39
PAAF1-215ENST00000544909 POLR1AO95602 1720 aaPredicted RBP17.46■□□□□ 0.39
PAAF1-215ENST00000544909 CDC42BPAQ5VT25 1732 aa17.45■□□□□ 0.38
PAAF1-215ENST00000544909 KIAA1107Q9UPP5 1409 aa17.44■□□□□ 0.38
PAAF1-215ENST00000544909 ATP10BO94823 1461 aa17.43■□□□□ 0.38
PAAF1-215ENST00000544909 PLEKHD1A6NEE1 506 aa17.42■□□□□ 0.38
PAAF1-215ENST00000544909 MBD5Q9P267 1494 aa17.42■□□□□ 0.38
PAAF1-215ENST00000544909 L3MBTL2Q969R5 705 aa17.42■□□□□ 0.38
PAAF1-215ENST00000544909 CNTLNQ9NXG0 1405 aa17.42■□□□□ 0.38
PAAF1-215ENST00000544909 SLC4A1APQ9BWU0 796 aaKnown RBP17.41■□□□□ 0.38
PAAF1-215ENST00000544909 SPATA31E1Q6ZUB1 1445 aa17.41■□□□□ 0.38
PAAF1-215ENST00000544909 ZNF644Q9H582 1327 aaPredicted RBP17.41■□□□□ 0.38
PAAF1-215ENST00000544909 ANKRD50Q9ULJ7 1429 aa17.4■□□□□ 0.38
PAAF1-215ENST00000544909 HSPA5P11021 654 aaKnown RBP17.4■□□□□ 0.38
PAAF1-215ENST00000544909 ARHGEF12Q9NZN5 1544 aa17.39■□□□□ 0.38
PAAF1-215ENST00000544909 WASHC2AQ641Q2 1341 aa17.39■□□□□ 0.37
PAAF1-215ENST00000544909 RSPH4AQ5TD94 716 aa17.39■□□□□ 0.37
PAAF1-215ENST00000544909 SHROOM2Q13796 1616 aa17.38■□□□□ 0.37
PAAF1-215ENST00000544909 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
PAAF1-215ENST00000544909 KCNH8Q96L42 1107 aa17.37■□□□□ 0.37
PAAF1-215ENST00000544909 ARID4BQ4LE39 1312 aaPredicted RBP17.37■□□□□ 0.37
PAAF1-215ENST00000544909 PTPRGP23470 1445 aa17.37■□□□□ 0.37
PAAF1-215ENST00000544909 ARID3CA6NKF2 412 aa17.36■□□□□ 0.37
PAAF1-215ENST00000544909 CCDC7Q96M83 1385 aa17.36■□□□□ 0.37
PAAF1-215ENST00000544909 PREX2Q70Z35 1606 aa17.35■□□□□ 0.37
PAAF1-215ENST00000544909 UHRF1BP1Q6BDS2 1440 aa17.35■□□□□ 0.37
PAAF1-215ENST00000544909 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
PAAF1-215ENST00000544909 MYT1Q01538 1121 aa17.33■□□□□ 0.37
PAAF1-215ENST00000544909 MAST1Q9Y2H9 1570 aa17.33■□□□□ 0.36
PAAF1-215ENST00000544909 FBLN2P98095 1184 aa17.33■□□□□ 0.36
PAAF1-215ENST00000544909 CCDC141Q6ZP82 1450 aa17.32■□□□□ 0.36
PAAF1-215ENST00000544909 PLEKHH2Q8IVE3 1493 aa17.3■□□□□ 0.36
PAAF1-215ENST00000544909 TSPY4P0CV99 314 aa17.29■□□□□ 0.36
PAAF1-215ENST00000544909 TSPY10P0CW01 314 aa17.29■□□□□ 0.36
PAAF1-215ENST00000544909 NEFLP07196 543 aa17.28■□□□□ 0.36
PAAF1-215ENST00000544909 RALGAPBQ86X10 1494 aa17.28■□□□□ 0.36
PAAF1-215ENST00000544909 NBPF8Q3BBV2 869 aa17.27■□□□□ 0.36
PAAF1-215ENST00000544909 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
PAAF1-215ENST00000544909 KIF15Q9NS87 1388 aa17.26■□□□□ 0.35
PAAF1-215ENST00000544909 PLXNC1O60486 1568 aa17.26■□□□□ 0.35
PAAF1-215ENST00000544909 SAMD9LQ8IVG5 1584 aa17.26■□□□□ 0.35
PAAF1-215ENST00000544909 ABCC2Q92887 1545 aa17.25■□□□□ 0.35
PAAF1-215ENST00000544909 CHD1O14646 1710 aa17.25■□□□□ 0.35
PAAF1-215ENST00000544909 CDC42BPBQ9Y5S2 1711 aa17.25■□□□□ 0.35
PAAF1-215ENST00000544909 FOXD1Q16676 465 aa17.25■□□□□ 0.35
PAAF1-215ENST00000544909 KDM5CP41229 1560 aa17.24■□□□□ 0.35
PAAF1-215ENST00000544909 PKD2Q13563 968 aa17.24■□□□□ 0.35
PAAF1-215ENST00000544909 UNC13BO14795 1591 aa17.23■□□□□ 0.35
PAAF1-215ENST00000544909 NUP155O75694 1391 aa17.23■□□□□ 0.35
PAAF1-215ENST00000544909 ERICH6BQ5W0A0 696 aa17.23■□□□□ 0.35
PAAF1-215ENST00000544909 PRKRIP1Q9H875 184 aaPredicted RBP17.23■□□□□ 0.35
PAAF1-215ENST00000544909 ZNF777Q9ULD5 760 aaPredicted RBP17.23■□□□□ 0.35
PAAF1-215ENST00000544909 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.35
PAAF1-215ENST00000544909 KIF7Q2M1P5 1343 aa17.21■□□□□ 0.35
PAAF1-215ENST00000544909 USP47Q96K76 1375 aa17.21■□□□□ 0.34
PAAF1-215ENST00000544909 FAM135AQ9P2D6 1515 aa17.19■□□□□ 0.34
PAAF1-215ENST00000544909 MYO5CQ9NQX4 1742 aa17.19■□□□□ 0.34
PAAF1-215ENST00000544909 KTN1Q86UP2 1357 aaKnown RBP17.18■□□□□ 0.34
PAAF1-215ENST00000544909 ARAP3Q8WWN8 1544 aa17.18■□□□□ 0.34
PAAF1-215ENST00000544909 ATP10AO60312 1499 aa17.17■□□□□ 0.34
PAAF1-215ENST00000544909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.17■□□□□ 0.34
PAAF1-215ENST00000544909 MAGI2Q86UL8 1455 aa17.17■□□□□ 0.34
PAAF1-215ENST00000544909 TTC37Q6PGP7 1564 aa17.16■□□□□ 0.34
PAAF1-215ENST00000544909 LAMC1P11047 1609 aa17.15■□□□□ 0.34
PAAF1-215ENST00000544909 IQGAP3Q86VI3 1631 aa17.15■□□□□ 0.34
PAAF1-215ENST00000544909 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
PAAF1-215ENST00000544909 FKBP8Q14318 412 aa17.15■□□□□ 0.34
PAAF1-215ENST00000544909 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
PAAF1-215ENST00000544909 ERBINQ96RT1 1412 aa17.15■□□□□ 0.34
PAAF1-215ENST00000544909 SYCP2Q9BX26 1530 aa17.14■□□□□ 0.33
PAAF1-215ENST00000544909 DUOX2Q9NRD8 1548 aa17.14■□□□□ 0.33
PAAF1-215ENST00000544909 ZBED9Q6R2W3 1325 aa17.14■□□□□ 0.33
PAAF1-215ENST00000544909 CLASP1Q7Z460 1538 aa17.14■□□□□ 0.33
PAAF1-215ENST00000544909 HNRNPUQ00839 825 aaKnown RBP eCLIP17.14■□□□□ 0.33
PAAF1-215ENST00000544909 DHX29Q7Z478 1369 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms