RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 ST20-MTHFSA0A0A6YYL1 179 aa17.61■□□□□ 0.41
PCMTD1-208ENST00000544451 AKNAQ7Z591 1439 aa17.61■□□□□ 0.41
PCMTD1-208ENST00000544451 NAIPQ13075 1403 aa17.61■□□□□ 0.41
PCMTD1-208ENST00000544451 ARXQ96QS3 562 aa17.6■□□□□ 0.41
PCMTD1-208ENST00000544451 PLEKHD1A6NEE1 506 aa17.59■□□□□ 0.41
PCMTD1-208ENST00000544451 NEFMP07197 916 aa17.59■□□□□ 0.41
PCMTD1-208ENST00000544451 CANXP27824 592 aaKnown RBP17.59■□□□□ 0.41
PCMTD1-208ENST00000544451 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCMTD1-208ENST00000544451 HFM1A2PYH4 1435 aa17.58■□□□□ 0.4
PCMTD1-208ENST00000544451 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.4
PCMTD1-208ENST00000544451 CNTLNQ9NXG0 1405 aa17.57■□□□□ 0.4
PCMTD1-208ENST00000544451 FYCO1Q9BQS8 1478 aa17.56■□□□□ 0.4
PCMTD1-208ENST00000544451 RGS3P49796 1198 aa17.56■□□□□ 0.4
PCMTD1-208ENST00000544451 NUP155O75694 1391 aa17.55■□□□□ 0.4
PCMTD1-208ENST00000544451 RCAN3Q9UKA8 241 aa17.54■□□□□ 0.4
PCMTD1-208ENST00000544451 POLA1P09884 1462 aaPredicted RBP17.54■□□□□ 0.4
PCMTD1-208ENST00000544451 WDR43Q15061 677 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCMTD1-208ENST00000544451 ERICH6BQ5W0A0 696 aa17.54■□□□□ 0.4
PCMTD1-208ENST00000544451 HNRNPMP52272 730 aaKnown RBP eCLIP17.53■□□□□ 0.43e-6■■■■■ 43.2
PCMTD1-208ENST00000544451 USP47Q96K76 1375 aa17.53■□□□□ 0.4
PCMTD1-208ENST00000544451 EIF5BO60841 1220 aaKnown RBP17.52■□□□□ 0.4
PCMTD1-208ENST00000544451 SKAP1Q86WV1 359 aa17.52■□□□□ 0.39
PCMTD1-208ENST00000544451 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.39
PCMTD1-208ENST00000544451 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
PCMTD1-208ENST00000544451 CHGAP10645 457 aaKnown RBP17.51■□□□□ 0.39
PCMTD1-208ENST00000544451 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
PCMTD1-208ENST00000544451 IPO9Q96P70 1041 aaKnown RBP17.51■□□□□ 0.39
PCMTD1-208ENST00000544451 HMGXB3Q12766 1538 aa17.5■□□□□ 0.39
PCMTD1-208ENST00000544451 NEUROD2Q15784 382 aa17.5■□□□□ 0.39
PCMTD1-208ENST00000544451 CDCA7LQ96GN5 454 aa17.47■□□□□ 0.39
PCMTD1-208ENST00000544451 TNNT2P45379 298 aaPredicted RBP17.46■□□□□ 0.39
PCMTD1-208ENST00000544451 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
PCMTD1-208ENST00000544451 ROCK2O75116 1388 aaKnown RBP17.45■□□□□ 0.38
PCMTD1-208ENST00000544451 CDK13Q14004 1512 aaKnown RBP17.44■□□□□ 0.38
PCMTD1-208ENST00000544451 KNSTRNQ9Y448 316 aa17.42■□□□□ 0.38
PCMTD1-208ENST00000544451 MAP3K1Q13233 1512 aa17.41■□□□□ 0.38
PCMTD1-208ENST00000544451 RRP1P56182 461 aaKnown RBP17.41■□□□□ 0.38
PCMTD1-208ENST00000544451 PDE4AP27815 886 aa17.4■□□□□ 0.38
PCMTD1-208ENST00000544451 PTPN23Q9H3S7 1636 aa17.4■□□□□ 0.38
PCMTD1-208ENST00000544451 CCDC146Q8IYE0 955 aa17.39■□□□□ 0.37
PCMTD1-208ENST00000544451 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.38■□□□□ 0.37
PCMTD1-208ENST00000544451 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
PCMTD1-208ENST00000544451 KTN1Q86UP2 1357 aaKnown RBP17.38■□□□□ 0.37
PCMTD1-208ENST00000544451 CRBNQ96SW2 442 aa17.37■□□□□ 0.37
PCMTD1-208ENST00000544451 PANK3Q9H999 370 aa17.37■□□□□ 0.37
PCMTD1-208ENST00000544451 FRAT1Q92837 279 aaPredicted RBP17.37■□□□□ 0.37
PCMTD1-208ENST00000544451 ANKRD30AQ9BXX3 1397 aa17.37■□□□□ 0.37
PCMTD1-208ENST00000544451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.37■□□□□ 0.371e-6■■■■■ 40.5
PCMTD1-208ENST00000544451 NLRP13Q86W25 1043 aa17.36■□□□□ 0.37
PCMTD1-208ENST00000544451 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
PCMTD1-208ENST00000544451 EFCAB5A4FU69 1503 aa17.36■□□□□ 0.37
PCMTD1-208ENST00000544451 MYBBP1AQ9BQG0 1328 aaKnown RBP17.36■□□□□ 0.37
PCMTD1-208ENST00000544451 RALBP1Q15311 655 aa17.35■□□□□ 0.37
PCMTD1-208ENST00000544451 CC2D2AQ9P2K1 1620 aa17.33■□□□□ 0.37
PCMTD1-208ENST00000544451 PRDM2Q13029 1718 aa17.33■□□□□ 0.36
PCMTD1-208ENST00000544451 TCERG1O14776 1098 aaKnown RBP17.33■□□□□ 0.36
PCMTD1-208ENST00000544451 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.36
PCMTD1-208ENST00000544451 KIF15Q9NS87 1388 aa17.32■□□□□ 0.36
PCMTD1-208ENST00000544451 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
PCMTD1-208ENST00000544451 ANKRD30BQ9BXX2 1392 aa17.32■□□□□ 0.36
PCMTD1-208ENST00000544451 TMF1P82094 1093 aa17.32■□□□□ 0.36
PCMTD1-208ENST00000544451 JPH4Q96JJ6 628 aa17.32■□□□□ 0.36
PCMTD1-208ENST00000544451 PRG4Q92954 1404 aaPredicted RBP17.32■□□□□ 0.36
PCMTD1-208ENST00000544451 NCOA1Q15788 1441 aa17.3■□□□□ 0.36
PCMTD1-208ENST00000544451 SPRYD3Q8NCJ5 442 aa17.3■□□□□ 0.36
PCMTD1-208ENST00000544451 IL27Q8NEV9 243 aa17.29■□□□□ 0.36
PCMTD1-208ENST00000544451 SUPT6HQ7KZ85 1726 aaKnown RBP17.29■□□□□ 0.36
PCMTD1-208ENST00000544451 EHBP1L1Q8N3D4 1523 aa17.28■□□□□ 0.36
PCMTD1-208ENST00000544451 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
PCMTD1-208ENST00000544451 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.36
PCMTD1-208ENST00000544451 EPRSP07814 1512 aaKnown RBP17.27■□□□□ 0.36
PCMTD1-208ENST00000544451 DNMBPQ6XZF7 1577 aa17.27■□□□□ 0.36
PCMTD1-208ENST00000544451 DAPK1P53355 1430 aa17.27■□□□□ 0.35
PCMTD1-208ENST00000544451 ANKRD50Q9ULJ7 1429 aa17.24■□□□□ 0.35
PCMTD1-208ENST00000544451 SLKQ9H2G2 1235 aaPredicted RBP17.24■□□□□ 0.35
PCMTD1-208ENST00000544451 SMG6Q86US8 1419 aaKnown RBP17.23■□□□□ 0.35
PCMTD1-208ENST00000544451 SNAPC4Q5SXM2 1469 aa17.23■□□□□ 0.35
PCMTD1-208ENST00000544451 ADAMTS8Q9UP79 889 aa17.23■□□□□ 0.35
PCMTD1-208ENST00000544451 ABCC5O15440 1437 aa17.23■□□□□ 0.35
PCMTD1-208ENST00000544451 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
PCMTD1-208ENST00000544451 CFAP43Q8NDM7 1665 aa17.22■□□□□ 0.35
PCMTD1-208ENST00000544451 C20orf194Q5TEA3 1177 aa17.22■□□□□ 0.35
PCMTD1-208ENST00000544451 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
PCMTD1-208ENST00000544451 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
PCMTD1-208ENST00000544451 BCL2L13Q9BXK5 485 aa17.21■□□□□ 0.35
PCMTD1-208ENST00000544451 ERCC6Q03468 1493 aa17.2■□□□□ 0.34
PCMTD1-208ENST00000544451 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
PCMTD1-208ENST00000544451 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
PCMTD1-208ENST00000544451 THOC2Q8NI27 1593 aaKnown RBP17.19■□□□□ 0.34
PCMTD1-208ENST00000544451 RPRD2Q5VT52 1461 aaKnown RBP17.18■□□□□ 0.34
PCMTD1-208ENST00000544451 UPF2Q9HAU5 1272 aaKnown RBP17.18■□□□□ 0.34
PCMTD1-208ENST00000544451 APAF1O14727 1248 aa17.18■□□□□ 0.34
PCMTD1-208ENST00000544451 ANO8Q9HCE9 1232 aaPredicted RBP17.18■□□□□ 0.34
PCMTD1-208ENST00000544451 CCDC144AA2RUR9 1427 aa17.18■□□□□ 0.34
PCMTD1-208ENST00000544451 GOLGA2Q08379 1002 aa17.18■□□□□ 0.34
PCMTD1-208ENST00000544451 MIA2Q96PC5 1412 aa17.18■□□□□ 0.34
PCMTD1-208ENST00000544451 KIAA1107Q9UPP5 1409 aa17.17■□□□□ 0.34
PCMTD1-208ENST00000544451 PDE3BQ13370 1112 aa17.16■□□□□ 0.34
PCMTD1-208ENST00000544451 KDM6BO15054 1643 aa17.15■□□□□ 0.34
PCMTD1-208ENST00000544451 BACH2Q9BYV9 841 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms