RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 PSEN1P49768 467 aa18.12■□□□□ 0.49
RFC5-209ENST00000543153 SNAPC4Q5SXM2 1469 aa18.12■□□□□ 0.49
RFC5-209ENST00000543153 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
RFC5-209ENST00000543153 CUX1P39880 1505 aa18.11■□□□□ 0.49
RFC5-209ENST00000543153 HAX1O00165 279 aa18.09■□□□□ 0.49
RFC5-209ENST00000543153 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
RFC5-209ENST00000543153 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
RFC5-209ENST00000543153 RYDENQ9NUL5 291 aaKnown RBP18.06■□□□□ 0.48
RFC5-209ENST00000543153 NKX1-1Q15270 411 aaPredicted RBP18.05■□□□□ 0.48
RFC5-209ENST00000543153 GRIN2BQ13224 1484 aa18.05■□□□□ 0.48
RFC5-209ENST00000543153 ARAP1Q96P48 1450 aa18.05■□□□□ 0.48
RFC5-209ENST00000543153 MAGI1Q96QZ7 1491 aaPredicted RBP18.04■□□□□ 0.48
RFC5-209ENST00000543153 SYNJ1O43426 1573 aa18.02■□□□□ 0.48
RFC5-209ENST00000543153 SYNJ2O15056 1496 aa17.99■□□□□ 0.47
RFC5-209ENST00000543153 VSIG10Q8N0Z9 540 aa17.98■□□□□ 0.47
RFC5-209ENST00000543153 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
RFC5-209ENST00000543153 CLASP1Q7Z460 1538 aa17.97■□□□□ 0.47
RFC5-209ENST00000543153 GTPBP6O43824 516 aaPredicted RBP17.96■□□□□ 0.47
RFC5-209ENST00000543153 PBRM1Q86U86 1689 aa17.95■□□□□ 0.46
RFC5-209ENST00000543153 CLCN6P51797 869 aa17.93■□□□□ 0.46
RFC5-209ENST00000543153 MS4A3Q96HJ5 214 aa17.93■□□□□ 0.46
RFC5-209ENST00000543153 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
RFC5-209ENST00000543153 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.46
RFC5-209ENST00000543153 CABP2Q9NPB3 220 aa17.89■□□□□ 0.45
RFC5-209ENST00000543153 TSHZ2Q9NRE2 1034 aa17.89■□□□□ 0.45
RFC5-209ENST00000543153 ABCA5Q8WWZ7 1642 aa17.89■□□□□ 0.45
RFC5-209ENST00000543153 GOLGA2Q08379 1002 aa17.86■□□□□ 0.45
RFC5-209ENST00000543153 TMEM106CQ9BVX2 250 aa17.86■□□□□ 0.45
RFC5-209ENST00000543153 SOX12O15370 315 aa17.82■□□□□ 0.44
RFC5-209ENST00000543153 EFCAB3Q8N7B9 438 aa17.82■□□□□ 0.44
RFC5-209ENST00000543153 GRIN2AQ12879 1464 aa17.82■□□□□ 0.44
RFC5-209ENST00000543153 EVX2Q03828 476 aa17.81■□□□□ 0.44
RFC5-209ENST00000543153 POTEHQ6S545 545 aa17.81■□□□□ 0.44
RFC5-209ENST00000543153 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
RFC5-209ENST00000543153 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
RFC5-209ENST00000543153 TIE1P35590 1138 aa17.79■□□□□ 0.44
RFC5-209ENST00000543153 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
RFC5-209ENST00000543153 NLRP6P59044 892 aa17.77■□□□□ 0.44
RFC5-209ENST00000543153 MFRPQ9BY79 579 aa17.77■□□□□ 0.44
RFC5-209ENST00000543153 TRPC6Q9Y210 931 aa17.77■□□□□ 0.44
RFC5-209ENST00000543153 GALR2O43603 387 aaPredicted RBP17.75■□□□□ 0.43
RFC5-209ENST00000543153 FHAD1B1AJZ9 1412 aa17.74■□□□□ 0.43
RFC5-209ENST00000543153 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
RFC5-209ENST00000543153 MKRN3Q13064 507 aaKnown RBP17.73■□□□□ 0.43
RFC5-209ENST00000543153 CEP170Q5SW79 1584 aa17.73■□□□□ 0.43
RFC5-209ENST00000543153 NUP160Q12769 1436 aa17.72■□□□□ 0.43
RFC5-209ENST00000543153 TTLL13PA6NNM8 815 aa17.71■□□□□ 0.43
RFC5-209ENST00000543153 ERICH3Q5RHP9 1530 aa17.71■□□□□ 0.43
RFC5-209ENST00000543153 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
RFC5-209ENST00000543153 PHF8Q9UPP1 1060 aa17.69■□□□□ 0.42
RFC5-209ENST00000543153 BMP2KQ9NSY1 1161 aaPredicted RBP17.68■□□□□ 0.42
RFC5-209ENST00000543153 FBXO22Q8NEZ5 403 aa17.65■□□□□ 0.42
RFC5-209ENST00000543153 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
RFC5-209ENST00000543153 TRIM35Q9UPQ4 493 aa17.61■□□□□ 0.41
RFC5-209ENST00000543153 PRG4Q92954 1404 aaPredicted RBP17.61■□□□□ 0.41
RFC5-209ENST00000543153 GABBR2O75899 941 aa17.58■□□□□ 0.4
RFC5-209ENST00000543153 JPH4Q96JJ6 628 aa17.55■□□□□ 0.4
RFC5-209ENST00000543153 RUSC2Q8N2Y8 1516 aa17.54■□□□□ 0.4
RFC5-209ENST00000543153 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.54■□□□□ 0.4
RFC5-209ENST00000543153 PPP1R37O75864 691 aa17.53■□□□□ 0.4
RFC5-209ENST00000543153 KIF27Q86VH2 1401 aa17.52■□□□□ 0.4
RFC5-209ENST00000543153 ATMINO43313 823 aaPredicted RBP17.51■□□□□ 0.39
RFC5-209ENST00000543153 ATN1P54259 1190 aaPredicted RBP17.51■□□□□ 0.39
RFC5-209ENST00000543153 ASTLQ6HA08 431 aaPredicted RBP17.51■□□□□ 0.39
RFC5-209ENST00000543153 BCANQ96GW7 911 aa17.5■□□□□ 0.39
RFC5-209ENST00000543153 MS4A4AQ96JQ5 239 aa17.5■□□□□ 0.39
RFC5-209ENST00000543153 DCBLD2Q96PD2 775 aa17.5■□□□□ 0.39
RFC5-209ENST00000543153 CUL7Q14999 1698 aa17.45■□□□□ 0.38
RFC5-209ENST00000543153 IER5LQ5T953 404 aa17.45■□□□□ 0.38
RFC5-209ENST00000543153 WDR70Q9NW82 654 aa17.45■□□□□ 0.38
RFC5-209ENST00000543153 IGF1RP08069 1367 aa17.44■□□□□ 0.38
RFC5-209ENST00000543153 KIAA0586Q9BVV6 1533 aa17.44■□□□□ 0.38
RFC5-209ENST00000543153 ILDR1Q86SU0 546 aaPredicted RBP17.43■□□□□ 0.38
RFC5-209ENST00000543153 CADPS2Q86UW7 1296 aa17.43■□□□□ 0.38
RFC5-209ENST00000543153 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
RFC5-209ENST00000543153 FAM69CQ0P6D2 419 aa17.41■□□□□ 0.38
RFC5-209ENST00000543153 OCEL1Q9H607 264 aa17.38■□□□□ 0.37
RFC5-209ENST00000543153 CARMIL1Q5VZK9 1371 aa17.38■□□□□ 0.37
RFC5-209ENST00000543153 KIF13AQ9H1H9 1805 aa17.37■□□□□ 0.37
RFC5-209ENST00000543153 SP7Q8TDD2 431 aaPredicted RBP17.37■□□□□ 0.37
RFC5-209ENST00000543153 ADCY10Q96PN6 1610 aa17.36■□□□□ 0.37
RFC5-209ENST00000543153 ABCC10Q5T3U5 1492 aa17.36■□□□□ 0.37
RFC5-209ENST00000543153 MAPKBP1O60336 1514 aa17.36■□□□□ 0.37
RFC5-209ENST00000543153 PLCG2P16885 1265 aa17.34■□□□□ 0.37
RFC5-209ENST00000543153 IRX5P78411 483 aaPredicted RBP17.34■□□□□ 0.37
RFC5-209ENST00000543153 CARMIL2Q6F5E8 1435 aa17.34■□□□□ 0.37
RFC5-209ENST00000543153 PTPRGP23470 1445 aa17.32■□□□□ 0.36
RFC5-209ENST00000543153 DIP2BQ9P265 1576 aa17.32■□□□□ 0.36
RFC5-209ENST00000543153 PDE4AP27815 886 aa17.31■□□□□ 0.36
RFC5-209ENST00000543153 G3V3G9 751 aa17.3■□□□□ 0.36
RFC5-209ENST00000543153 SEC24BO95487 1268 aa17.3■□□□□ 0.36
RFC5-209ENST00000543153 P3H3Q8IVL6 736 aa17.3■□□□□ 0.36
RFC5-209ENST00000543153 IQGAP2Q13576 1575 aa17.29■□□□□ 0.36
RFC5-209ENST00000543153 NBR1Q14596 966 aa17.29■□□□□ 0.36
RFC5-209ENST00000543153 PDCD7Q8N8D1 485 aaKnown RBP17.29■□□□□ 0.36
RFC5-209ENST00000543153 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
RFC5-209ENST00000543153 DPY19L2Q6NUT2 758 aa17.28■□□□□ 0.36
RFC5-209ENST00000543153 SLC39A7Q92504 469 aa17.28■□□□□ 0.36
RFC5-209ENST00000543153 C7P10643 843 aa17.25■□□□□ 0.35
RFC5-209ENST00000543153 PELP1Q8IZL8 1130 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms