RNA–Protein interactions for RNA: ENST00000540809.1

PHC1-209, Transcript of polyhomeotic homolog 1, humanhuman

TSL 2

Gene PHC1, Length 793 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-209ENST00000540809 CHRM1P11229 460 aaPredicted RBP13.74□□□□□ -0.21
PHC1-209ENST00000540809 GSE1Q14687 1217 aa13.74□□□□□ -0.21
PHC1-209ENST00000540809 CUX1P39880 1505 aa13.74□□□□□ -0.21
PHC1-209ENST00000540809 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
PHC1-209ENST00000540809 SUPT5HO00267 1087 aaKnown RBP13.72□□□□□ -0.21
PHC1-209ENST00000540809 SEC24BO95487 1268 aa13.72□□□□□ -0.21
PHC1-209ENST00000540809 IRX5P78411 483 aaPredicted RBP13.7□□□□□ -0.22
PHC1-209ENST00000540809 SCUBE2Q9NQ36 999 aa13.7□□□□□ -0.22
PHC1-209ENST00000540809 LCE2DQ5TA82 110 aaPredicted RBP13.69□□□□□ -0.22
PHC1-209ENST00000540809 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
PHC1-209ENST00000540809 ARAP1Q96P48 1450 aa13.68□□□□□ -0.22
PHC1-209ENST00000540809 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
PHC1-209ENST00000540809 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
PHC1-209ENST00000540809 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
PHC1-209ENST00000540809 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
PHC1-209ENST00000540809 CLASP1Q7Z460 1538 aa13.61□□□□□ -0.23
PHC1-209ENST00000540809 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
PHC1-209ENST00000540809 WDR97A6NE52 1622 aa13.61□□□□□ -0.23
PHC1-209ENST00000540809 POTEMA6NI47 508 aa13.6□□□□□ -0.23
PHC1-209ENST00000540809 GAPVD1Q14C86 1478 aa13.6□□□□□ -0.23
PHC1-209ENST00000540809 PLCG2P16885 1265 aa13.59□□□□□ -0.23
PHC1-209ENST00000540809 SYNJ2O15056 1496 aa13.59□□□□□ -0.23
PHC1-209ENST00000540809 POTEGQ6S5H5 508 aa13.58□□□□□ -0.24
PHC1-209ENST00000540809 OCEL1Q9H607 264 aa13.58□□□□□ -0.24
PHC1-209ENST00000540809 ABCA10Q8WWZ4 1543 aa13.57□□□□□ -0.24
PHC1-209ENST00000540809 SYNJ1O43426 1573 aa13.56□□□□□ -0.24
PHC1-209ENST00000540809 PBRM1Q86U86 1689 aa13.54□□□□□ -0.24
PHC1-209ENST00000540809 PSEN1P49768 467 aa13.54□□□□□ -0.24
PHC1-209ENST00000540809 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
PHC1-209ENST00000540809 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
PHC1-209ENST00000540809 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
PHC1-209ENST00000540809 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.25
PHC1-209ENST00000540809 WRNQ14191 1432 aaPredicted RBP eCLIP13.5□□□□□ -0.25
PHC1-209ENST00000540809 ILDR1Q86SU0 546 aaPredicted RBP13.49□□□□□ -0.25
PHC1-209ENST00000540809 PDAP1Q13442 181 aaKnown RBP13.48□□□□□ -0.25
PHC1-209ENST00000540809 ERCC6L2Q5T890 1561 aa13.47□□□□□ -0.25
PHC1-209ENST00000540809 SLAIN1Q8ND83 568 aa13.47□□□□□ -0.25
PHC1-209ENST00000540809 TOP2BQ02880 1626 aa13.46□□□□□ -0.25
PHC1-209ENST00000540809 GRIN2AQ12879 1464 aa13.46□□□□□ -0.25
PHC1-209ENST00000540809 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
PHC1-209ENST00000540809 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
PHC1-209ENST00000540809 NUP160Q12769 1436 aa13.42□□□□□ -0.26
PHC1-209ENST00000540809 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
PHC1-209ENST00000540809 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
PHC1-209ENST00000540809 FHAD1B1AJZ9 1412 aa13.41□□□□□ -0.26
PHC1-209ENST00000540809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.38□□□□□ -0.27
PHC1-209ENST00000540809 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
PHC1-209ENST00000540809 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
PHC1-209ENST00000540809 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
PHC1-209ENST00000540809 ERICH3Q5RHP9 1530 aa13.37□□□□□ -0.27
PHC1-209ENST00000540809 JPH4Q96JJ6 628 aa13.36□□□□□ -0.27
PHC1-209ENST00000540809 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
PHC1-209ENST00000540809 SHROOM2Q13796 1616 aa13.35□□□□□ -0.27
PHC1-209ENST00000540809 ST18O60284 1047 aa13.35□□□□□ -0.27
PHC1-209ENST00000540809 DPY19L2Q6NUT2 758 aa13.34□□□□□ -0.27
PHC1-209ENST00000540809 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
PHC1-209ENST00000540809 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.34□□□□□ -0.27
PHC1-209ENST00000540809 PRG4Q92954 1404 aaPredicted RBP13.33□□□□□ -0.28
PHC1-209ENST00000540809 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
PHC1-209ENST00000540809 IGF1RP08069 1367 aa13.3□□□□□ -0.28
PHC1-209ENST00000540809 RIOK3O14730 519 aaKnown RBP13.24□□□□□ -0.29
PHC1-209ENST00000540809 EFCAB3Q8N7B9 438 aa13.24□□□□□ -0.29
PHC1-209ENST00000540809 C3orf67Q6ZVT6 689 aa13.23□□□□□ -0.29
PHC1-209ENST00000540809 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
PHC1-209ENST00000540809 KIF27Q86VH2 1401 aa13.21□□□□□ -0.3
PHC1-209ENST00000540809 KIF13AQ9H1H9 1805 aa13.2□□□□□ -0.3
PHC1-209ENST00000540809 KIAA0586Q9BVV6 1533 aa13.2□□□□□ -0.3
PHC1-209ENST00000540809 SNPHO15079 494 aa13.2□□□□□ -0.3
PHC1-209ENST00000540809 TMEM121BQ9BXQ6 578 aaPredicted RBP13.2□□□□□ -0.3
PHC1-209ENST00000540809 BOLA1Q9Y3E2 137 aa13.2□□□□□ -0.3
PHC1-209ENST00000540809 FAM69CQ0P6D2 419 aa13.19□□□□□ -0.3
PHC1-209ENST00000540809 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.18□□□□□ -0.3
PHC1-209ENST00000540809 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
PHC1-209ENST00000540809 ZFP91Q96JP5 570 aaPredicted RBP13.18□□□□□ -0.3
PHC1-209ENST00000540809 CARMIL1Q5VZK9 1371 aa13.17□□□□□ -0.3
PHC1-209ENST00000540809 ADCY10Q96PN6 1610 aa13.16□□□□□ -0.3
PHC1-209ENST00000540809 VGFO15240 615 aaPredicted RBP13.15□□□□□ -0.3
PHC1-209ENST00000540809 ABCC10Q5T3U5 1492 aa13.15□□□□□ -0.3
PHC1-209ENST00000540809 TTBK1Q5TCY1 1321 aaPredicted RBP13.14□□□□□ -0.31
PHC1-209ENST00000540809 CUL7Q14999 1698 aa13.13□□□□□ -0.31
PHC1-209ENST00000540809 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
PHC1-209ENST00000540809 SOX12O15370 315 aa13.11□□□□□ -0.31
PHC1-209ENST00000540809 PTPRGP23470 1445 aa13.11□□□□□ -0.31
PHC1-209ENST00000540809 MAPKBP1O60336 1514 aa13.1□□□□□ -0.31
PHC1-209ENST00000540809 MARVELD3Q96A59 401 aa13.1□□□□□ -0.31
PHC1-209ENST00000540809 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
PHC1-209ENST00000540809 DIP2BQ9P265 1576 aa13.08□□□□□ -0.32
PHC1-209ENST00000540809 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
PHC1-209ENST00000540809 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
PHC1-209ENST00000540809 PKD2Q13563 968 aa13.06□□□□□ -0.32
PHC1-209ENST00000540809 TMEM92Q6UXU6 159 aa13.05□□□□□ -0.32
PHC1-209ENST00000540809 MICALL2Q8IY33 904 aa13.05□□□□□ -0.32
PHC1-209ENST00000540809 CARMIL2Q6F5E8 1435 aa13.04□□□□□ -0.32
PHC1-209ENST00000540809 TSPOAP1O95153 1857 aa13.04□□□□□ -0.32
PHC1-209ENST00000540809 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
PHC1-209ENST00000540809 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
PHC1-209ENST00000540809 G3V3G9 751 aa13.03□□□□□ -0.32
PHC1-209ENST00000540809 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
PHC1-209ENST00000540809 IQGAP2Q13576 1575 aa13.03□□□□□ -0.32
PHC1-209ENST00000540809 FBXO22Q8NEZ5 403 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms