RNA–Protein interactions for RNA: ENST00000540809.1

PHC1-209, Transcript of polyhomeotic homolog 1, humanhuman

TSL 2

Gene PHC1, Length 793 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-209ENST00000540809 AEBP2Q6ZN18 517 aaPredicted RBP29.24■■■□□ 2.27
PHC1-209ENST00000540809 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
PHC1-209ENST00000540809 SENP3Q9H4L4 574 aaPredicted RBP24.79■■□□□ 1.56
PHC1-209ENST00000540809 PHF23Q9BUL5 403 aaPredicted RBP24.54■■□□□ 1.52
PHC1-209ENST00000540809 FOXD1Q16676 465 aa23.19■■□□□ 1.3
PHC1-209ENST00000540809 PLPPR3Q6T4P5 718 aa22.14■■□□□ 1.13
PHC1-209ENST00000540809 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
PHC1-209ENST00000540809 ADRA2BP18089 450 aa21.65■■□□□ 1.06
PHC1-209ENST00000540809 PIAS4Q8N2W9 510 aaPredicted RBP21.58■■□□□ 1.05
PHC1-209ENST00000540809 MSH5O43196 834 aa21.57■■□□□ 1.04
PHC1-209ENST00000540809 POTEDQ86YR6 584 aa21.02■□□□□ 0.96
PHC1-209ENST00000540809 MAPK8IP2Q13387 824 aaPredicted RBP19.9■□□□□ 0.78
PHC1-209ENST00000540809 DMRT2Q9Y5R5 561 aa19.72■□□□□ 0.75
PHC1-209ENST00000540809 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
PHC1-209ENST00000540809 PPP4R3CPQ6ZMV5 832 aa19.45■□□□□ 0.7
PHC1-209ENST00000540809 HOXD11P31277 338 aaPredicted RBP19.05■□□□□ 0.64
PHC1-209ENST00000540809 CNKSR2Q8WXI2 1034 aa19.05■□□□□ 0.64
PHC1-209ENST00000540809 NISCHQ9Y2I1 1504 aa18.95■□□□□ 0.62
PHC1-209ENST00000540809 RNF216Q9NWF9 866 aaPredicted RBP18.88■□□□□ 0.61
PHC1-209ENST00000540809 DCAF8L1A6NGE4 600 aa18.74■□□□□ 0.59
PHC1-209ENST00000540809 NCBP3Q53F19 620 aaKnown RBP18.63■□□□□ 0.57
PHC1-209ENST00000540809 RNF39Q9H2S5 420 aa18.49■□□□□ 0.55
PHC1-209ENST00000540809 NPM3O75607 178 aaKnown RBP18.48■□□□□ 0.55
PHC1-209ENST00000540809 CACNB1Q02641 598 aaPredicted RBP18.44■□□□□ 0.54
PHC1-209ENST00000540809 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
PHC1-209ENST00000540809 KCNA4P22459 653 aa18.19■□□□□ 0.5
PHC1-209ENST00000540809 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
PHC1-209ENST00000540809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
PHC1-209ENST00000540809 U3KPZ7 1027 aaPredicted RBP17.76■□□□□ 0.43
PHC1-209ENST00000540809 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
PHC1-209ENST00000540809 SPINK5Q9NQ38 1064 aaPredicted RBP17.48■□□□□ 0.39
PHC1-209ENST00000540809 CAPN15O75808 1086 aa17.33■□□□□ 0.36
PHC1-209ENST00000540809 DSG3P32926 999 aa17.33■□□□□ 0.36
PHC1-209ENST00000540809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
PHC1-209ENST00000540809 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
PHC1-209ENST00000540809 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
PHC1-209ENST00000540809 ABCC9O60706 1549 aa17.1■□□□□ 0.33
PHC1-209ENST00000540809 APLP2Q06481 763 aa17.09■□□□□ 0.33
PHC1-209ENST00000540809 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
PHC1-209ENST00000540809 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.32
PHC1-209ENST00000540809 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
PHC1-209ENST00000540809 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.32
PHC1-209ENST00000540809 ABCB7O75027 752 aa16.98■□□□□ 0.31
PHC1-209ENST00000540809 CCDC180Q9P1Z9 1646 aa16.93■□□□□ 0.3
PHC1-209ENST00000540809 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
PHC1-209ENST00000540809 ZBTB22O15209 634 aa16.8■□□□□ 0.28
PHC1-209ENST00000540809 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
PHC1-209ENST00000540809 POLA2Q14181 598 aa16.69■□□□□ 0.26
PHC1-209ENST00000540809 POTEHQ6S545 545 aa16.44■□□□□ 0.22
PHC1-209ENST00000540809 RBM42Q9BTD8 480 aaKnown RBP16.41■□□□□ 0.22
PHC1-209ENST00000540809 ATXN8OSP0DMR3 200 aa16.39■□□□□ 0.21
PHC1-209ENST00000540809 ZBTB12Q9Y330 459 aaPredicted RBP16.28■□□□□ 0.2
PHC1-209ENST00000540809 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
PHC1-209ENST00000540809 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
PHC1-209ENST00000540809 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
PHC1-209ENST00000540809 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
PHC1-209ENST00000540809 CHRDL2Q6WN34 429 aa16.1■□□□□ 0.17
PHC1-209ENST00000540809 NACADO15069 1562 aa16.05■□□□□ 0.16
PHC1-209ENST00000540809 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
PHC1-209ENST00000540809 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
PHC1-209ENST00000540809 REM2Q8IYK8 340 aaPredicted RBP15.99■□□□□ 0.15
PHC1-209ENST00000540809 MKRN4PQ13434 485 aaPredicted RBP15.98■□□□□ 0.15
PHC1-209ENST00000540809 FBLN2P98095 1184 aa15.9■□□□□ 0.14
PHC1-209ENST00000540809 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
PHC1-209ENST00000540809 SPDYE2BA6NHP3 402 aa15.84■□□□□ 0.13
PHC1-209ENST00000540809 SPDYE6P0CI01 402 aa15.84■□□□□ 0.13
PHC1-209ENST00000540809 SPDYE2Q495Y8 402 aa15.84■□□□□ 0.13
PHC1-209ENST00000540809 PITPNM1O00562 1244 aa15.82■□□□□ 0.12
PHC1-209ENST00000540809 MYO15BQ96JP2 1530 aa15.8■□□□□ 0.12
PHC1-209ENST00000540809 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
PHC1-209ENST00000540809 PIP4P2Q8N4L2 257 aa15.76■□□□□ 0.11
PHC1-209ENST00000540809 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
PHC1-209ENST00000540809 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
PHC1-209ENST00000540809 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.11
PHC1-209ENST00000540809 ZCCHC6Q5VYS8 1495 aaKnown RBP15.66■□□□□ 0.1
PHC1-209ENST00000540809 ZNF692Q9BU19 519 aaPredicted RBP15.64■□□□□ 0.09
PHC1-209ENST00000540809 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
PHC1-209ENST00000540809 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.08
PHC1-209ENST00000540809 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
PHC1-209ENST00000540809 CLEC11AQ9Y240 323 aa15.45■□□□□ 0.06
PHC1-209ENST00000540809 SP7Q8TDD2 431 aaPredicted RBP15.44■□□□□ 0.06
PHC1-209ENST00000540809 SHROOM4Q9ULL8 1493 aa15.41■□□□□ 0.06
PHC1-209ENST00000540809 CC2D2AQ9P2K1 1620 aa15.41■□□□□ 0.06
PHC1-209ENST00000540809 CECR2Q9BXF3 1484 aa15.38■□□□□ 0.05
PHC1-209ENST00000540809 HAX1O00165 279 aa15.37■□□□□ 0.05
PHC1-209ENST00000540809 PRKAR2AP13861 404 aaKnown RBP15.37■□□□□ 0.05
PHC1-209ENST00000540809 EVX2Q03828 476 aa15.35■□□□□ 0.05
PHC1-209ENST00000540809 EIF4G1Q04637 1599 aaKnown RBP15.35■□□□□ 0.05
PHC1-209ENST00000540809 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
PHC1-209ENST00000540809 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
PHC1-209ENST00000540809 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
PHC1-209ENST00000540809 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
PHC1-209ENST00000540809 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
PHC1-209ENST00000540809 CREBZFQ9NS37 354 aa14.98□□□□□ -0.01
PHC1-209ENST00000540809 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
PHC1-209ENST00000540809 GABBR2O75899 941 aa14.93□□□□□ -0.02
PHC1-209ENST00000540809 PROM2Q8N271 834 aa14.93□□□□□ -0.02
PHC1-209ENST00000540809 CD44P16070 742 aaKnown RBP14.88□□□□□ -0.03
PHC1-209ENST00000540809 NCAPD3P42695 1498 aa14.88□□□□□ -0.03
PHC1-209ENST00000540809 DNAJC5Q9H3Z4 198 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms