RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 CCDC18Q5T9S5 1454 aa13.27□□□□□ -0.28
NCAPD3-214ENST00000534548 PTMAP06454 111 aaKnown RBP13.27□□□□□ -0.29
NCAPD3-214ENST00000534548 HSPA5P11021 654 aaKnown RBP13.26□□□□□ -0.29
NCAPD3-214ENST00000534548 FMN1Q68DA7 1419 aa13.26□□□□□ -0.29
NCAPD3-214ENST00000534548 POLA1P09884 1462 aaPredicted RBP13.25□□□□□ -0.29
NCAPD3-214ENST00000534548 CASKIN1Q8WXD9 1431 aa13.25□□□□□ -0.29
NCAPD3-214ENST00000534548 NUDCQ9Y266 331 aa13.24□□□□□ -0.29
NCAPD3-214ENST00000534548 MAP3K1Q13233 1512 aa13.24□□□□□ -0.29
NCAPD3-214ENST00000534548 MSNP26038 577 aaKnown RBP13.23□□□□□ -0.29
NCAPD3-214ENST00000534548 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
NCAPD3-214ENST00000534548 MSH5O43196 834 aa13.22□□□□□ -0.29
NCAPD3-214ENST00000534548 GZF1Q9H116 711 aaPredicted RBP13.22□□□□□ -0.29
NCAPD3-214ENST00000534548 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
NCAPD3-214ENST00000534548 FYCO1Q9BQS8 1478 aa13.22□□□□□ -0.29
NCAPD3-214ENST00000534548 TOPBP1Q92547 1522 aa13.22□□□□□ -0.29
NCAPD3-214ENST00000534548 CDK11BP21127 795 aaKnown RBP13.21□□□□□ -0.29
NCAPD3-214ENST00000534548 SPRYD3Q8NCJ5 442 aa13.21□□□□□ -0.29
NCAPD3-214ENST00000534548 PKNOX2Q96KN3 472 aa13.21□□□□□ -0.29
NCAPD3-214ENST00000534548 SLKQ9H2G2 1235 aaPredicted RBP13.21□□□□□ -0.29
NCAPD3-214ENST00000534548 GOLGA6L3A6NEY3 463 aa13.21□□□□□ -0.29
NCAPD3-214ENST00000534548 PDE4AP27815 886 aa13.21□□□□□ -0.29
NCAPD3-214ENST00000534548 RCAN3Q9UKA8 241 aa13.2□□□□□ -0.3
NCAPD3-214ENST00000534548 CC2D2AQ9P2K1 1620 aa13.2□□□□□ -0.3
NCAPD3-214ENST00000534548 L3MBTL2Q969R5 705 aa13.19□□□□□ -0.3
NCAPD3-214ENST00000534548 UACAQ9BZF9 1416 aa13.19□□□□□ -0.3
NCAPD3-214ENST00000534548 NCOA2Q15596 1464 aa13.18□□□□□ -0.3
NCAPD3-214ENST00000534548 SLC4A3P48751 1232 aa13.18□□□□□ -0.3
NCAPD3-214ENST00000534548 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
NCAPD3-214ENST00000534548 MPHOSPH9Q99550 1183 aa13.18□□□□□ -0.3
NCAPD3-214ENST00000534548 ARID3AQ99856 593 aa13.17□□□□□ -0.3
NCAPD3-214ENST00000534548 CCDC184Q52MB2 194 aa13.17□□□□□ -0.3
NCAPD3-214ENST00000534548 WASHC2AQ641Q2 1341 aa13.17□□□□□ -0.3
NCAPD3-214ENST00000534548 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
NCAPD3-214ENST00000534548 MYOM3Q5VTT5 1437 aa13.16□□□□□ -0.3
NCAPD3-214ENST00000534548 FBLN2P98095 1184 aa13.16□□□□□ -0.3
NCAPD3-214ENST00000534548 NAIPQ13075 1403 aa13.16□□□□□ -0.3
NCAPD3-214ENST00000534548 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.37e-7■■■■□ 22
NCAPD3-214ENST00000534548 HFM1A2PYH4 1435 aa13.15□□□□□ -0.3
NCAPD3-214ENST00000534548 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.3
NCAPD3-214ENST00000534548 BRPF3Q9ULD4 1205 aa13.15□□□□□ -0.3
NCAPD3-214ENST00000534548 CARD11Q9BXL7 1154 aa13.15□□□□□ -0.3
NCAPD3-214ENST00000534548 HSCBQ8IWL3 235 aa13.14□□□□□ -0.31
NCAPD3-214ENST00000534548 GAPVD1Q14C86 1478 aa13.14□□□□□ -0.31
NCAPD3-214ENST00000534548 DNMBPQ6XZF7 1577 aa13.14□□□□□ -0.31
NCAPD3-214ENST00000534548 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
NCAPD3-214ENST00000534548 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
NCAPD3-214ENST00000534548 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
NCAPD3-214ENST00000534548 ZNF644Q9H582 1327 aaPredicted RBP13.12□□□□□ -0.31
NCAPD3-214ENST00000534548 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
NCAPD3-214ENST00000534548 FRAT1Q92837 279 aaPredicted RBP13.11□□□□□ -0.31
NCAPD3-214ENST00000534548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
NCAPD3-214ENST00000534548 C11orf95C9JLR9 678 aaPredicted RBP13.11□□□□□ -0.31
NCAPD3-214ENST00000534548 MYH16Q9H6N6 1097 aa13.1□□□□□ -0.31
NCAPD3-214ENST00000534548 NFKBIBQ15653 356 aa13.09□□□□□ -0.31
NCAPD3-214ENST00000534548 CC2D1BQ5T0F9 858 aaKnown RBP13.09□□□□□ -0.31
NCAPD3-214ENST00000534548 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.32
NCAPD3-214ENST00000534548 FTSJ3Q8IY81 847 aaKnown RBP13.08□□□□□ -0.32
NCAPD3-214ENST00000534548 EXOC6Q8TAG9 804 aa13.08□□□□□ -0.32
NCAPD3-214ENST00000534548 SNAPC4Q5SXM2 1469 aa13.08□□□□□ -0.32
NCAPD3-214ENST00000534548 PTPN23Q9H3S7 1636 aa13.08□□□□□ -0.32
NCAPD3-214ENST00000534548 MS4A1P11836 297 aa13.07□□□□□ -0.32
NCAPD3-214ENST00000534548 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
NCAPD3-214ENST00000534548 NBPF8Q3BBV2 869 aa13.07□□□□□ -0.32
NCAPD3-214ENST00000534548 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
NCAPD3-214ENST00000534548 PRKRIP1Q9H875 184 aaPredicted RBP13.07□□□□□ -0.32
NCAPD3-214ENST00000534548 PRDM2Q13029 1718 aa13.06□□□□□ -0.32
NCAPD3-214ENST00000534548 GBP4Q96PP9 640 aa13.06□□□□□ -0.32
NCAPD3-214ENST00000534548 PLCB2Q00722 1185 aa13.06□□□□□ -0.32
NCAPD3-214ENST00000534548 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
NCAPD3-214ENST00000534548 TPRNQ4KMQ1 711 aa13.05□□□□□ -0.32
NCAPD3-214ENST00000534548 CFDP1Q9UEE9 299 aaPredicted RBP13.04□□□□□ -0.32
NCAPD3-214ENST00000534548 ZBTB7CA1YPR0 619 aa13.04□□□□□ -0.32
NCAPD3-214ENST00000534548 FAM161AQ3B820 660 aa13.04□□□□□ -0.32
NCAPD3-214ENST00000534548 NEUROD2Q15784 382 aa13.04□□□□□ -0.32
NCAPD3-214ENST00000534548 UBE2Q2Q8WVN8 375 aa13.04□□□□□ -0.32
NCAPD3-214ENST00000534548 CHAF1AQ13111 956 aaPredicted RBP13.04□□□□□ -0.32
NCAPD3-214ENST00000534548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.323e-6■■■□□ 16.6
NCAPD3-214ENST00000534548 RRP1P56182 461 aaKnown RBP13.03□□□□□ -0.32
NCAPD3-214ENST00000534548 CDK13Q14004 1512 aaKnown RBP13.03□□□□□ -0.32
NCAPD3-214ENST00000534548 CUL7Q14999 1698 aa13.03□□□□□ -0.32
NCAPD3-214ENST00000534548 PTMSP20962 102 aa13.03□□□□□ -0.32
NCAPD3-214ENST00000534548 FAM43AQ8N2R8 423 aa13.02□□□□□ -0.32
NCAPD3-214ENST00000534548 GRIN2BQ13224 1484 aa13.01□□□□□ -0.33
NCAPD3-214ENST00000534548 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
NCAPD3-214ENST00000534548 CCDC7Q96M83 1385 aa13.01□□□□□ -0.33
NCAPD3-214ENST00000534548 PDE3BQ13370 1112 aa13□□□□□ -0.33
NCAPD3-214ENST00000534548 SUPT6HQ7KZ85 1726 aaKnown RBP13□□□□□ -0.33
NCAPD3-214ENST00000534548 CTTNBP2Q8WZ74 1663 aa13□□□□□ -0.33
NCAPD3-214ENST00000534548 KIF7Q2M1P5 1343 aa13□□□□□ -0.33
NCAPD3-214ENST00000534548 EHBP1L1Q8N3D4 1523 aa13□□□□□ -0.33
NCAPD3-214ENST00000534548 RALBP1Q15311 655 aa13□□□□□ -0.33
NCAPD3-214ENST00000534548 TSPY4P0CV99 314 aa13□□□□□ -0.33
NCAPD3-214ENST00000534548 TSPY10P0CW01 314 aa13□□□□□ -0.33
NCAPD3-214ENST00000534548 PKD2Q13563 968 aa12.99□□□□□ -0.33
NCAPD3-214ENST00000534548 CNTLNQ9NXG0 1405 aa12.99□□□□□ -0.33
NCAPD3-214ENST00000534548 PLIN1O60240 522 aa12.98□□□□□ -0.33
NCAPD3-214ENST00000534548 CASC1Q6TDU7 716 aa12.98□□□□□ -0.33
NCAPD3-214ENST00000534548 CENPQQ7L2Z9 268 aaPredicted RBP12.98□□□□□ -0.33
NCAPD3-214ENST00000534548 KTN1Q86UP2 1357 aaKnown RBP12.98□□□□□ -0.33
NCAPD3-214ENST00000534548 MAGI3Q5TCQ9 1506 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms