RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 DEKP35659 375 aaKnown RBP13.44□□□□□ -0.26
SF3B2-206ENST00000528302 NCOA2Q15596 1464 aa13.44□□□□□ -0.26
SF3B2-206ENST00000528302 CCDC136Q96JN2 1154 aa13.44□□□□□ -0.26
SF3B2-206ENST00000528302 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
SF3B2-206ENST00000528302 KDM2AQ9Y2K7 1162 aa13.43□□□□□ -0.26
SF3B2-206ENST00000528302 HFM1A2PYH4 1435 aa13.42□□□□□ -0.26
SF3B2-206ENST00000528302 CUL7Q14999 1698 aa13.42□□□□□ -0.26
SF3B2-206ENST00000528302 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
SF3B2-206ENST00000528302 CHMP7Q8WUX9 453 aaPredicted RBP13.42□□□□□ -0.26
SF3B2-206ENST00000528302 TAOK2Q9UL54 1235 aa13.42□□□□□ -0.26
SF3B2-206ENST00000528302 CFAP43Q8NDM7 1665 aa13.42□□□□□ -0.26
SF3B2-206ENST00000528302 AKNAQ7Z591 1439 aa13.42□□□□□ -0.26
SF3B2-206ENST00000528302 SNAPC4Q5SXM2 1469 aa13.42□□□□□ -0.26
SF3B2-206ENST00000528302 MAP3K1Q13233 1512 aa13.41□□□□□ -0.26
SF3B2-206ENST00000528302 KIF7Q2M1P5 1343 aa13.4□□□□□ -0.26
SF3B2-206ENST00000528302 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
SF3B2-206ENST00000528302 MYOM3Q5VTT5 1437 aa13.39□□□□□ -0.27
SF3B2-206ENST00000528302 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
SF3B2-206ENST00000528302 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
SF3B2-206ENST00000528302 CCDC7Q96M83 1385 aa13.39□□□□□ -0.27
SF3B2-206ENST00000528302 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
SF3B2-206ENST00000528302 PTPN23Q9H3S7 1636 aa13.38□□□□□ -0.27
SF3B2-206ENST00000528302 MAGI3Q5TCQ9 1506 aa13.38□□□□□ -0.27
SF3B2-206ENST00000528302 ERCC6Q03468 1493 aa13.38□□□□□ -0.27
SF3B2-206ENST00000528302 NOP58Q9Y2X3 529 aaKnown RBP13.38□□□□□ -0.27
SF3B2-206ENST00000528302 CNTLNQ9NXG0 1405 aa13.37□□□□□ -0.27
SF3B2-206ENST00000528302 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
SF3B2-206ENST00000528302 SKAP1Q86WV1 359 aa13.35□□□□□ -0.27
SF3B2-206ENST00000528302 ZBED9Q6R2W3 1325 aa13.34□□□□□ -0.27
SF3B2-206ENST00000528302 GRIN2BQ13224 1484 aa13.34□□□□□ -0.27
SF3B2-206ENST00000528302 LAS1LQ9Y4W2 734 aaKnown RBP13.33□□□□□ -0.27
SF3B2-206ENST00000528302 TARBP1Q13395 1621 aaKnown RBP13.33□□□□□ -0.28
SF3B2-206ENST00000528302 KDM6BO15054 1643 aa13.32□□□□□ -0.28
SF3B2-206ENST00000528302 ANP32AP39687 249 aaKnown RBP13.32□□□□□ -0.28
SF3B2-206ENST00000528302 MRC2Q9UBG0 1479 aa13.31□□□□□ -0.28
SF3B2-206ENST00000528302 THOC2Q8NI27 1593 aaKnown RBP13.31□□□□□ -0.28
SF3B2-206ENST00000528302 RTL5Q5HYW3 569 aaPredicted RBP13.3□□□□□ -0.28
SF3B2-206ENST00000528302 EPRSP07814 1512 aaKnown RBP13.3□□□□□ -0.28
SF3B2-206ENST00000528302 KDM5BQ9UGL1 1544 aa13.3□□□□□ -0.28
SF3B2-206ENST00000528302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.3□□□□□ -0.28
SF3B2-206ENST00000528302 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
SF3B2-206ENST00000528302 SAMD9Q5K651 1589 aa13.29□□□□□ -0.28
SF3B2-206ENST00000528302 IQGAP2Q13576 1575 aa13.29□□□□□ -0.28
SF3B2-206ENST00000528302 DENND4BO75064 1496 aaPredicted RBP13.29□□□□□ -0.28
SF3B2-206ENST00000528302 PBRM1Q86U86 1689 aa13.29□□□□□ -0.28
SF3B2-206ENST00000528302 CFDP1Q9UEE9 299 aaPredicted RBP13.29□□□□□ -0.28
SF3B2-206ENST00000528302 SUPT6HQ7KZ85 1726 aaKnown RBP13.29□□□□□ -0.28
SF3B2-206ENST00000528302 PKD2Q13563 968 aa13.28□□□□□ -0.28
SF3B2-206ENST00000528302 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
SF3B2-206ENST00000528302 PRG4Q92954 1404 aaPredicted RBP13.27□□□□□ -0.29
SF3B2-206ENST00000528302 PLIN1O60240 522 aa13.27□□□□□ -0.29
SF3B2-206ENST00000528302 RGL3Q3MIN7 710 aa13.27□□□□□ -0.29
SF3B2-206ENST00000528302 EXOC6Q8TAG9 804 aa13.27□□□□□ -0.29
SF3B2-206ENST00000528302 CARD11Q9BXL7 1154 aa13.26□□□□□ -0.29
SF3B2-206ENST00000528302 NCOA1Q15788 1441 aa13.25□□□□□ -0.29
SF3B2-206ENST00000528302 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
SF3B2-206ENST00000528302 EHBP1L1Q8N3D4 1523 aa13.24□□□□□ -0.29
SF3B2-206ENST00000528302 PLB1Q6P1J6 1458 aa13.24□□□□□ -0.29
SF3B2-206ENST00000528302 ST20-MTHFSA0A0A6YYL1 179 aa13.24□□□□□ -0.29
SF3B2-206ENST00000528302 TPRNQ4KMQ1 711 aa13.23□□□□□ -0.29
SF3B2-206ENST00000528302 ADAMTS12P58397 1594 aa13.23□□□□□ -0.29
SF3B2-206ENST00000528302 UGGT2Q9NYU1 1516 aa13.23□□□□□ -0.29
SF3B2-206ENST00000528302 USP47Q96K76 1375 aa13.23□□□□□ -0.29
SF3B2-206ENST00000528302 CC2D1BQ5T0F9 858 aaKnown RBP13.23□□□□□ -0.29
SF3B2-206ENST00000528302 ERICH6BQ5W0A0 696 aa13.23□□□□□ -0.29
SF3B2-206ENST00000528302 DCAF11Q8TEB1 546 aa13.23□□□□□ -0.29
SF3B2-206ENST00000528302 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
SF3B2-206ENST00000528302 IPO9Q96P70 1041 aaKnown RBP13.22□□□□□ -0.29
SF3B2-206ENST00000528302 CDCA7LQ96GN5 454 aa13.22□□□□□ -0.29
SF3B2-206ENST00000528302 HECW1Q76N89 1606 aa13.2□□□□□ -0.3
SF3B2-206ENST00000528302 SLC4A3P48751 1232 aa13.2□□□□□ -0.3
SF3B2-206ENST00000528302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.2□□□□□ -0.32e-10■■■□□ 18.7
SF3B2-206ENST00000528302 HNRNPMP52272 730 aaKnown RBP eCLIP13.19□□□□□ -0.35e-6■■■■□ 20.8
SF3B2-206ENST00000528302 PNISRQ8TF01 805 aaKnown RBP13.19□□□□□ -0.3
SF3B2-206ENST00000528302 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
SF3B2-206ENST00000528302 IFT140Q96RY7 1462 aa13.18□□□□□ -0.3
SF3B2-206ENST00000528302 DISP1Q96F81 1524 aa13.18□□□□□ -0.3
SF3B2-206ENST00000528302 NUP153P49790 1475 aaKnown RBP13.17□□□□□ -0.3
SF3B2-206ENST00000528302 GRIN2AQ12879 1464 aa13.17□□□□□ -0.3
SF3B2-206ENST00000528302 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
SF3B2-206ENST00000528302 NEFMP07197 916 aa13.17□□□□□ -0.3
SF3B2-206ENST00000528302 WDR62O43379 1518 aa13.17□□□□□ -0.3
SF3B2-206ENST00000528302 EIF4G3O43432 1585 aaKnown RBP13.16□□□□□ -0.3
SF3B2-206ENST00000528302 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
SF3B2-206ENST00000528302 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
SF3B2-206ENST00000528302 ABCC5O15440 1437 aa13.15□□□□□ -0.3
SF3B2-206ENST00000528302 DHX29Q7Z478 1369 aaKnown RBP13.15□□□□□ -0.3
SF3B2-206ENST00000528302 KIAA0586Q9BVV6 1533 aa13.15□□□□□ -0.3
SF3B2-206ENST00000528302 DAPK1P53355 1430 aa13.15□□□□□ -0.3
SF3B2-206ENST00000528302 RPRD2Q5VT52 1461 aaKnown RBP13.14□□□□□ -0.31
SF3B2-206ENST00000528302 SMG6Q86US8 1419 aaKnown RBP13.14□□□□□ -0.31
SF3B2-206ENST00000528302 RRP1P56182 461 aaKnown RBP13.14□□□□□ -0.31
SF3B2-206ENST00000528302 NUP155O75694 1391 aa13.13□□□□□ -0.31
SF3B2-206ENST00000528302 PDE4AP27815 886 aa13.12□□□□□ -0.31
SF3B2-206ENST00000528302 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.12□□□□□ -0.31
SF3B2-206ENST00000528302 KIAA0556O60303 1618 aa13.12□□□□□ -0.31
SF3B2-206ENST00000528302 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
SF3B2-206ENST00000528302 SPATA31E1Q6ZUB1 1445 aa13.11□□□□□ -0.31
SF3B2-206ENST00000528302 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
SF3B2-206ENST00000528302 ARHGEF11O15085 1522 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms