RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 NESP48681 1621 aa11.76□□□□□ -0.53
CTR9-202ENST00000524523 SLC39A7Q92504 469 aa11.76□□□□□ -0.53
CTR9-202ENST00000524523 TRIM35Q9UPQ4 493 aa11.76□□□□□ -0.53
CTR9-202ENST00000524523 VGFO15240 615 aaPredicted RBP11.75□□□□□ -0.53
CTR9-202ENST00000524523 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
CTR9-202ENST00000524523 C7P10643 843 aa11.74□□□□□ -0.53
CTR9-202ENST00000524523 CUX2O14529 1486 aa11.73□□□□□ -0.53
CTR9-202ENST00000524523 RGL2O15211 777 aa11.73□□□□□ -0.53
CTR9-202ENST00000524523 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
CTR9-202ENST00000524523 RAPGEF2Q9Y4G8 1499 aa11.73□□□□□ -0.53
CTR9-202ENST00000524523 POLA1P09884 1462 aaPredicted RBP11.72□□□□□ -0.53
CTR9-202ENST00000524523 RTN4Q9NQC3 1192 aaKnown RBP11.71□□□□□ -0.53
CTR9-202ENST00000524523 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
CTR9-202ENST00000524523 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
CTR9-202ENST00000524523 CARMIL1Q5VZK9 1371 aa11.7□□□□□ -0.54
CTR9-202ENST00000524523 CLIP1P30622 1438 aa11.69□□□□□ -0.54
CTR9-202ENST00000524523 IER5LQ5T953 404 aa11.69□□□□□ -0.54
CTR9-202ENST00000524523 PCGF6Q9BYE7 350 aa11.69□□□□□ -0.54
CTR9-202ENST00000524523 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.68□□□□□ -0.54
CTR9-202ENST00000524523 ZFP91Q96JP5 570 aaPredicted RBP11.68□□□□□ -0.54
CTR9-202ENST00000524523 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
CTR9-202ENST00000524523 SEC24BO95487 1268 aa11.66□□□□□ -0.54
CTR9-202ENST00000524523 MKRN3Q13064 507 aaKnown RBP11.66□□□□□ -0.54
CTR9-202ENST00000524523 CABP2Q9NPB3 220 aa11.65□□□□□ -0.54
CTR9-202ENST00000524523 VPS8Q8N3P4 1428 aa11.64□□□□□ -0.55
CTR9-202ENST00000524523 WDR97A6NE52 1622 aa11.62□□□□□ -0.55
CTR9-202ENST00000524523 RAD54L2Q9Y4B4 1467 aa11.62□□□□□ -0.55
CTR9-202ENST00000524523 STK25O00506 426 aa11.61□□□□□ -0.55
CTR9-202ENST00000524523 LHX8Q68G74 356 aa11.61□□□□□ -0.55
CTR9-202ENST00000524523 CUL7Q14999 1698 aa11.61□□□□□ -0.55
CTR9-202ENST00000524523 BCL11BQ9C0K0 894 aaPredicted RBP11.6□□□□□ -0.55
CTR9-202ENST00000524523 STK24Q9Y6E0 443 aa11.6□□□□□ -0.55
CTR9-202ENST00000524523 GAPVD1Q14C86 1478 aa11.59□□□□□ -0.55
CTR9-202ENST00000524523 PLCG2P16885 1265 aa11.59□□□□□ -0.55
CTR9-202ENST00000524523 WDR62O43379 1518 aa11.59□□□□□ -0.55
CTR9-202ENST00000524523 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
CTR9-202ENST00000524523 IRX5P78411 483 aaPredicted RBP11.58□□□□□ -0.56
CTR9-202ENST00000524523 OCEL1Q9H607 264 aa11.58□□□□□ -0.56
CTR9-202ENST00000524523 KIF21AQ7Z4S6 1674 aa11.58□□□□□ -0.56
CTR9-202ENST00000524523 TARBP1Q13395 1621 aaKnown RBP11.57□□□□□ -0.56
CTR9-202ENST00000524523 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
CTR9-202ENST00000524523 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
CTR9-202ENST00000524523 EFCAB3Q8N7B9 438 aa11.56□□□□□ -0.56
CTR9-202ENST00000524523 POTEFA5A3E0 1075 aa11.55□□□□□ -0.56
CTR9-202ENST00000524523 HRCP23327 699 aa11.55□□□□□ -0.56
CTR9-202ENST00000524523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.56
CTR9-202ENST00000524523 TDRD9Q8NDG6 1382 aaKnown RBP11.54□□□□□ -0.56
CTR9-202ENST00000524523 MAP3K1Q13233 1512 aa11.53□□□□□ -0.56
CTR9-202ENST00000524523 FHAD1B1AJZ9 1412 aa11.52□□□□□ -0.56
CTR9-202ENST00000524523 POTEB2H3BUK9 544 aa11.52□□□□□ -0.57
CTR9-202ENST00000524523 SOX12O15370 315 aa11.52□□□□□ -0.57
CTR9-202ENST00000524523 CHGAP10645 457 aaKnown RBP11.52□□□□□ -0.57
CTR9-202ENST00000524523 ZEB1P37275 1124 aaPredicted RBP11.52□□□□□ -0.57
CTR9-202ENST00000524523 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
CTR9-202ENST00000524523 GRIN2BQ13224 1484 aa11.51□□□□□ -0.57
CTR9-202ENST00000524523 ARHGAP35Q9NRY4 1499 aa11.51□□□□□ -0.57
CTR9-202ENST00000524523 HS6ST3Q8IZP7 471 aa11.51□□□□□ -0.57
CTR9-202ENST00000524523 ARAP1Q96P48 1450 aa11.51□□□□□ -0.57
CTR9-202ENST00000524523 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
CTR9-202ENST00000524523 ILDR1Q86SU0 546 aaPredicted RBP11.48□□□□□ -0.57
CTR9-202ENST00000524523 PDCD7Q8N8D1 485 aaKnown RBP11.48□□□□□ -0.57
CTR9-202ENST00000524523 AQRO60306 1485 aaKnown RBP eCLIP11.47□□□□□ -0.576e-6■■■■□ 25.1
CTR9-202ENST00000524523 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
CTR9-202ENST00000524523 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
CTR9-202ENST00000524523 NLRP6P59044 892 aa11.44□□□□□ -0.58
CTR9-202ENST00000524523 SCUBE2Q9NQ36 999 aa11.44□□□□□ -0.58
CTR9-202ENST00000524523 THOC2Q8NI27 1593 aaKnown RBP11.44□□□□□ -0.58
CTR9-202ENST00000524523 FMN1Q68DA7 1419 aa11.43□□□□□ -0.58
CTR9-202ENST00000524523 POTEJP0CG39 1038 aa11.43□□□□□ -0.58
CTR9-202ENST00000524523 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
CTR9-202ENST00000524523 MAGI1Q96QZ7 1491 aaPredicted RBP11.42□□□□□ -0.58
CTR9-202ENST00000524523 G3V3G9 751 aa11.41□□□□□ -0.58
CTR9-202ENST00000524523 DPY19L2Q6NUT2 758 aa11.4□□□□□ -0.58
CTR9-202ENST00000524523 OTUD5Q96G74 571 aa11.4□□□□□ -0.58
CTR9-202ENST00000524523 MFRPQ9BY79 579 aa11.4□□□□□ -0.58
CTR9-202ENST00000524523 CASKIN1Q8WXD9 1431 aa11.4□□□□□ -0.58
CTR9-202ENST00000524523 CTTNBP2Q8WZ74 1663 aa11.4□□□□□ -0.59
CTR9-202ENST00000524523 ADAMTS12P58397 1594 aa11.39□□□□□ -0.59
CTR9-202ENST00000524523 KIAA0586Q9BVV6 1533 aa11.39□□□□□ -0.59
CTR9-202ENST00000524523 FYCO1Q9BQS8 1478 aa11.38□□□□□ -0.59
CTR9-202ENST00000524523 RANGAP1P46060 587 aaPredicted RBP11.38□□□□□ -0.59
CTR9-202ENST00000524523 DNAJC5Q9H3Z4 198 aa11.38□□□□□ -0.59
CTR9-202ENST00000524523 PBRM1Q86U86 1689 aa11.37□□□□□ -0.59
CTR9-202ENST00000524523 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
CTR9-202ENST00000524523 PPARGC1BQ86YN6 1023 aaKnown RBP11.37□□□□□ -0.59
CTR9-202ENST00000524523 FBXO22Q8NEZ5 403 aa11.37□□□□□ -0.59
CTR9-202ENST00000524523 SAMD9Q5K651 1589 aa11.37□□□□□ -0.59
CTR9-202ENST00000524523 MS4A4AQ96JQ5 239 aa11.36□□□□□ -0.59
CTR9-202ENST00000524523 BOLA1Q9Y3E2 137 aa11.36□□□□□ -0.59
CTR9-202ENST00000524523 UGGT2Q9NYU1 1516 aa11.35□□□□□ -0.59
CTR9-202ENST00000524523 SYNJ2O15056 1496 aa11.35□□□□□ -0.59
CTR9-202ENST00000524523 RRBP1Q9P2E9 1410 aaKnown RBP11.35□□□□□ -0.59
CTR9-202ENST00000524523 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
CTR9-202ENST00000524523 GRIN2AQ12879 1464 aa11.33□□□□□ -0.6
CTR9-202ENST00000524523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.33□□□□□ -0.6
CTR9-202ENST00000524523 KANK4Q5T7N3 995 aaPredicted RBP11.33□□□□□ -0.6
CTR9-202ENST00000524523 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
CTR9-202ENST00000524523 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.33□□□□□ -0.6
CTR9-202ENST00000524523 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
CTR9-202ENST00000524523 TIAM1Q13009 1591 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms