RNA–Protein interactions for RNA: ENST00000520866.5

NSMCE2-208, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 2 BASIC

Gene NSMCE2, Length 1,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-208ENST00000520866 ZFP91Q96JP5 570 aaPredicted RBP15.36■□□□□ 0.05
NSMCE2-208ENST00000520866 PDCD7Q8N8D1 485 aaKnown RBP15.34■□□□□ 0.05
NSMCE2-208ENST00000520866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.34■□□□□ 0.053e-8■■■■□ 25.3
NSMCE2-208ENST00000520866 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.04
NSMCE2-208ENST00000520866 RGL2O15211 777 aa15.3■□□□□ 0.04
NSMCE2-208ENST00000520866 URB2Q14146 1524 aaKnown RBP15.29■□□□□ 0.04
NSMCE2-208ENST00000520866 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
NSMCE2-208ENST00000520866 EFCAB3Q8N7B9 438 aa15.26■□□□□ 0.03
NSMCE2-208ENST00000520866 L3MBTL3Q96JM7 780 aaPredicted RBP15.25■□□□□ 0.03
NSMCE2-208ENST00000520866 IFT140Q96RY7 1462 aa15.25■□□□□ 0.03
NSMCE2-208ENST00000520866 SOX12O15370 315 aa15.24■□□□□ 0.03
NSMCE2-208ENST00000520866 BCL11BQ9C0K0 894 aaPredicted RBP15.23■□□□□ 0.03
NSMCE2-208ENST00000520866 ABCC8Q09428 1581 aa15.22■□□□□ 0.03
NSMCE2-208ENST00000520866 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
NSMCE2-208ENST00000520866 STK25O00506 426 aa15.19■□□□□ 0.02
NSMCE2-208ENST00000520866 STK24Q9Y6E0 443 aa15.18■□□□□ 0.02
NSMCE2-208ENST00000520866 RIMBP3CA6NJZ7 1639 aa15.15■□□□□ 0.02
NSMCE2-208ENST00000520866 RIMBP3BA6NNM3 1639 aa15.15■□□□□ 0.02
NSMCE2-208ENST00000520866 RIMBP3Q9UFD9 1639 aa15.15■□□□□ 0.02
NSMCE2-208ENST00000520866 DPY19L2Q6NUT2 758 aa15.14■□□□□ 0.01
NSMCE2-208ENST00000520866 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.14■□□□□ 0.01
NSMCE2-208ENST00000520866 ARHGEF11O15085 1522 aa15.13■□□□□ 0.01
NSMCE2-208ENST00000520866 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
NSMCE2-208ENST00000520866 SLAIN1Q8ND83 568 aa15.12■□□□□ 0.01
NSMCE2-208ENST00000520866 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
NSMCE2-208ENST00000520866 CCDC88BA6NC98 1476 aa15.1■□□□□ 0.01
NSMCE2-208ENST00000520866 C3orf67Q6ZVT6 689 aa15.1■□□□□ 0.01
NSMCE2-208ENST00000520866 BOLA1Q9Y3E2 137 aa15.1■□□□□ 0.01
NSMCE2-208ENST00000520866 NLRP6P59044 892 aa15.09■□□□□ 0.01
NSMCE2-208ENST00000520866 PHF8Q9UPP1 1060 aa15.09■□□□□ 0.01
NSMCE2-208ENST00000520866 G3V3G9 751 aa15.08■□□□□ 0
NSMCE2-208ENST00000520866 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
NSMCE2-208ENST00000520866 MS4A4AQ96JQ5 239 aa15.07■□□□□ 0
NSMCE2-208ENST00000520866 TMEM121BQ9BXQ6 578 aaPredicted RBP15.07■□□□□ 0
NSMCE2-208ENST00000520866 HS6ST3Q8IZP7 471 aa15.06■□□□□ 0
NSMCE2-208ENST00000520866 EIF4G3O43432 1585 aaKnown RBP15.06■□□□□ 0
NSMCE2-208ENST00000520866 FBXO22Q8NEZ5 403 aa15.05■□□□□ -0
NSMCE2-208ENST00000520866 MFRPQ9BY79 579 aa15.04■□□□□ -0
NSMCE2-208ENST00000520866 CYB5RLQ6IPT4 315 aa15.03■□□□□ -0
NSMCE2-208ENST00000520866 AQRO60306 1485 aaKnown RBP eCLIP14.97□□□□□ -0.01
NSMCE2-208ENST00000520866 WDR97A6NE52 1622 aa14.97□□□□□ -0.01
NSMCE2-208ENST00000520866 TARBP1Q13395 1621 aaKnown RBP14.97□□□□□ -0.01
NSMCE2-208ENST00000520866 MICALL2Q8IY33 904 aa14.97□□□□□ -0.01
NSMCE2-208ENST00000520866 CHGAP10645 457 aaKnown RBP14.96□□□□□ -0.01
NSMCE2-208ENST00000520866 POLA1P09884 1462 aaPredicted RBP14.95□□□□□ -0.02
NSMCE2-208ENST00000520866 SNPHO15079 494 aa14.95□□□□□ -0.02
NSMCE2-208ENST00000520866 ARAP1Q96P48 1450 aa14.94□□□□□ -0.02
NSMCE2-208ENST00000520866 CHD1O14646 1710 aa14.93□□□□□ -0.02
NSMCE2-208ENST00000520866 FAM163AQ96GL9 167 aaPredicted RBP14.92□□□□□ -0.02
NSMCE2-208ENST00000520866 LCE2DQ5TA82 110 aaPredicted RBP14.91□□□□□ -0.02
NSMCE2-208ENST00000520866 SOGA1O94964 1423 aa14.91□□□□□ -0.02
NSMCE2-208ENST00000520866 AMER1Q5JTC6 1135 aaPredicted RBP14.9□□□□□ -0.02
NSMCE2-208ENST00000520866 MAGI1Q96QZ7 1491 aaPredicted RBP14.89□□□□□ -0.03
NSMCE2-208ENST00000520866 CHMP7Q8WUX9 453 aaPredicted RBP14.88□□□□□ -0.03
NSMCE2-208ENST00000520866 SYNJ1O43426 1573 aa14.87□□□□□ -0.03
NSMCE2-208ENST00000520866 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
NSMCE2-208ENST00000520866 GRIN2BQ13224 1484 aa14.84□□□□□ -0.03
NSMCE2-208ENST00000520866 SNAPC4Q5SXM2 1469 aa14.84□□□□□ -0.03
NSMCE2-208ENST00000520866 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
NSMCE2-208ENST00000520866 POTEMA6NI47 508 aa14.83□□□□□ -0.04
NSMCE2-208ENST00000520866 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
NSMCE2-208ENST00000520866 RYDENQ9NUL5 291 aaKnown RBP14.82□□□□□ -0.04
NSMCE2-208ENST00000520866 SYNJ2O15056 1496 aa14.82□□□□□ -0.04
NSMCE2-208ENST00000520866 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
NSMCE2-208ENST00000520866 ST18O60284 1047 aa14.81□□□□□ -0.04
NSMCE2-208ENST00000520866 POTEGQ6S5H5 508 aa14.81□□□□□ -0.04
NSMCE2-208ENST00000520866 TMEM92Q6UXU6 159 aa14.8□□□□□ -0.04
NSMCE2-208ENST00000520866 NKX1-1Q15270 411 aaPredicted RBP14.79□□□□□ -0.04
NSMCE2-208ENST00000520866 PPP1R37O75864 691 aa14.75□□□□□ -0.05
NSMCE2-208ENST00000520866 RTN4Q9NQC3 1192 aaKnown RBP14.74□□□□□ -0.05
NSMCE2-208ENST00000520866 CUX1P39880 1505 aa14.73□□□□□ -0.05
NSMCE2-208ENST00000520866 GAPVD1Q14C86 1478 aa14.73□□□□□ -0.05
NSMCE2-208ENST00000520866 HOXB3P14651 431 aaPredicted RBP14.72□□□□□ -0.05
NSMCE2-208ENST00000520866 DOK7Q18PE1 504 aa14.71□□□□□ -0.05
NSMCE2-208ENST00000520866 PCDH10Q9P2E7 1040 aa14.71□□□□□ -0.05
NSMCE2-208ENST00000520866 KIF3CO14782 793 aa14.69□□□□□ -0.06
NSMCE2-208ENST00000520866 ABCA10Q8WWZ4 1543 aa14.69□□□□□ -0.06
NSMCE2-208ENST00000520866 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
NSMCE2-208ENST00000520866 RIMBP2O15034 1052 aa14.64□□□□□ -0.07
NSMCE2-208ENST00000520866 GTPBP6O43824 516 aaPredicted RBP14.64□□□□□ -0.07
NSMCE2-208ENST00000520866 ZSWIM6Q9HCJ5 1215 aa14.64□□□□□ -0.07
NSMCE2-208ENST00000520866 ABCA5Q8WWZ7 1642 aa14.63□□□□□ -0.07
NSMCE2-208ENST00000520866 C2orf72A6NCS6 295 aa14.63□□□□□ -0.07
NSMCE2-208ENST00000520866 ZNF710Q8N1W2 664 aa14.63□□□□□ -0.07
NSMCE2-208ENST00000520866 WRNQ14191 1432 aaPredicted RBP eCLIP14.63□□□□□ -0.07
NSMCE2-208ENST00000520866 TMC2Q8TDI7 906 aa14.62□□□□□ -0.07
NSMCE2-208ENST00000520866 GRIN2AQ12879 1464 aa14.62□□□□□ -0.07
NSMCE2-208ENST00000520866 NUP160Q12769 1436 aa14.59□□□□□ -0.07
NSMCE2-208ENST00000520866 HOXB1P14653 301 aaPredicted RBP14.59□□□□□ -0.07
NSMCE2-208ENST00000520866 MARVELD3Q96A59 401 aa14.57□□□□□ -0.08
NSMCE2-208ENST00000520866 FHAD1B1AJZ9 1412 aa14.57□□□□□ -0.08
NSMCE2-208ENST00000520866 EMP3P54852 163 aa14.56□□□□□ -0.08
NSMCE2-208ENST00000520866 BBXQ8WY36 941 aaPredicted RBP14.56□□□□□ -0.08
NSMCE2-208ENST00000520866 GPHNQ9NQX3 736 aaPredicted RBP14.54□□□□□ -0.08
NSMCE2-208ENST00000520866 ADAMTS12P58397 1594 aa14.54□□□□□ -0.08
NSMCE2-208ENST00000520866 CEP170Q5SW79 1584 aa14.54□□□□□ -0.08
NSMCE2-208ENST00000520866 ERICH3Q5RHP9 1530 aa14.53□□□□□ -0.08
NSMCE2-208ENST00000520866 SLC34A2O95436 690 aa14.52□□□□□ -0.09
NSMCE2-208ENST00000520866 GPR153Q6NV75 609 aa14.51□□□□□ -0.09
NSMCE2-208ENST00000520866 SHROOM2Q13796 1616 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms