RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
NPM1-205ENST00000518587 GOLGA2Q08379 1002 aa11.42□□□□□ -0.58
NPM1-205ENST00000518587 MKRN3Q13064 507 aaKnown RBP11.41□□□□□ -0.58
NPM1-205ENST00000518587 TOPBP1Q92547 1522 aa11.39□□□□□ -0.59
NPM1-205ENST00000518587 DNMBPQ6XZF7 1577 aa11.38□□□□□ -0.59
NPM1-205ENST00000518587 SOX12O15370 315 aa11.38□□□□□ -0.59
NPM1-205ENST00000518587 MFRPQ9BY79 579 aa11.37□□□□□ -0.59
NPM1-205ENST00000518587 IER5LQ5T953 404 aa11.36□□□□□ -0.59
NPM1-205ENST00000518587 PHF8Q9UPP1 1060 aa11.36□□□□□ -0.59
NPM1-205ENST00000518587 SLC39A7Q92504 469 aa11.35□□□□□ -0.59
NPM1-205ENST00000518587 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.35□□□□□ -0.59
NPM1-205ENST00000518587 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
NPM1-205ENST00000518587 C7P10643 843 aa11.34□□□□□ -0.59
NPM1-205ENST00000518587 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
NPM1-205ENST00000518587 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
NPM1-205ENST00000518587 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.6
NPM1-205ENST00000518587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.66e-17■■□□□ 13.5
NPM1-205ENST00000518587 GTPBP6O43824 516 aaPredicted RBP11.32□□□□□ -0.6
NPM1-205ENST00000518587 NLRP6P59044 892 aa11.32□□□□□ -0.6
NPM1-205ENST00000518587 METRNQ9UJH8 293 aa11.32□□□□□ -0.6
NPM1-205ENST00000518587 COLQQ9Y215 455 aaPredicted RBP11.31□□□□□ -0.6
NPM1-205ENST00000518587 EIF4G3O43432 1585 aaKnown RBP11.3□□□□□ -0.6
NPM1-205ENST00000518587 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
NPM1-205ENST00000518587 MS4A4AQ96JQ5 239 aa11.3□□□□□ -0.6
NPM1-205ENST00000518587 OCEL1Q9H607 264 aa11.3□□□□□ -0.6
NPM1-205ENST00000518587 PAXIP1Q6ZW49 1069 aaPredicted RBP11.29□□□□□ -0.6
NPM1-205ENST00000518587 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
NPM1-205ENST00000518587 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
NPM1-205ENST00000518587 ZNF608Q9ULD9 1512 aaPredicted RBP11.28□□□□□ -0.6
NPM1-205ENST00000518587 SEC24BO95487 1268 aa11.27□□□□□ -0.61
NPM1-205ENST00000518587 CFAP44Q96MT7 982 aa11.27□□□□□ -0.61
NPM1-205ENST00000518587 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.61
NPM1-205ENST00000518587 PLCG2P16885 1265 aa11.26□□□□□ -0.61
NPM1-205ENST00000518587 RYDENQ9NUL5 291 aaKnown RBP11.26□□□□□ -0.61
NPM1-205ENST00000518587 POLA1P09884 1462 aaPredicted RBP11.25□□□□□ -0.61
NPM1-205ENST00000518587 PLCB2Q00722 1185 aa11.25□□□□□ -0.61
NPM1-205ENST00000518587 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
NPM1-205ENST00000518587 ARHGEF11O15085 1522 aa11.24□□□□□ -0.61
NPM1-205ENST00000518587 RIMBP3CA6NJZ7 1639 aa11.24□□□□□ -0.61
NPM1-205ENST00000518587 RIMBP3BA6NNM3 1639 aa11.24□□□□□ -0.61
NPM1-205ENST00000518587 RIMBP3Q9UFD9 1639 aa11.24□□□□□ -0.61
NPM1-205ENST00000518587 PPP1R37O75864 691 aa11.23□□□□□ -0.61
NPM1-205ENST00000518587 SOGA1O94964 1423 aa11.22□□□□□ -0.61
NPM1-205ENST00000518587 MAGI1Q96QZ7 1491 aaPredicted RBP11.2□□□□□ -0.62
NPM1-205ENST00000518587 AQRO60306 1485 aaKnown RBP eCLIP11.19□□□□□ -0.625e-9■■■■■ 26.9
NPM1-205ENST00000518587 CHD1O14646 1710 aa11.18□□□□□ -0.62
NPM1-205ENST00000518587 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
NPM1-205ENST00000518587 FGD5Q6ZNL6 1462 aa11.18□□□□□ -0.62
NPM1-205ENST00000518587 SYNJ1O43426 1573 aa11.17□□□□□ -0.62
NPM1-205ENST00000518587 POTEB2H3BUK9 544 aa11.16□□□□□ -0.62
NPM1-205ENST00000518587 L3MBTL3Q96JM7 780 aaPredicted RBP11.14□□□□□ -0.63
NPM1-205ENST00000518587 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
NPM1-205ENST00000518587 SYNJ2O15056 1496 aa11.13□□□□□ -0.63
NPM1-205ENST00000518587 RAD54L2Q9Y4B4 1467 aa11.13□□□□□ -0.63
NPM1-205ENST00000518587 POTEJP0CG39 1038 aa11.13□□□□□ -0.63
NPM1-205ENST00000518587 CHMP7Q8WUX9 453 aaPredicted RBP11.13□□□□□ -0.63
NPM1-205ENST00000518587 CUX1P39880 1505 aa11.13□□□□□ -0.63
NPM1-205ENST00000518587 TDRD9Q8NDG6 1382 aaKnown RBP11.13□□□□□ -0.63
NPM1-205ENST00000518587 SNAPC4Q5SXM2 1469 aa11.12□□□□□ -0.63
NPM1-205ENST00000518587 TMEM121BQ9BXQ6 578 aaPredicted RBP11.12□□□□□ -0.63
NPM1-205ENST00000518587 ABCA10Q8WWZ4 1543 aa11.11□□□□□ -0.63
NPM1-205ENST00000518587 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
NPM1-205ENST00000518587 CLASP1Q7Z460 1538 aa11.1□□□□□ -0.63
NPM1-205ENST00000518587 GAPVD1Q14C86 1478 aa11.1□□□□□ -0.63
NPM1-205ENST00000518587 ARAP1Q96P48 1450 aa11.09□□□□□ -0.63
NPM1-205ENST00000518587 CYB5RLQ6IPT4 315 aa11.09□□□□□ -0.63
NPM1-205ENST00000518587 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
NPM1-205ENST00000518587 WRNQ14191 1432 aaPredicted RBP eCLIP11.09□□□□□ -0.633e-7■■□□□ 13.1
NPM1-205ENST00000518587 G3V3G9 751 aa11.07□□□□□ -0.64
NPM1-205ENST00000518587 PBRM1Q86U86 1689 aa11.07□□□□□ -0.64
NPM1-205ENST00000518587 ABCA5Q8WWZ7 1642 aa11.06□□□□□ -0.64
NPM1-205ENST00000518587 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
NPM1-205ENST00000518587 CADPS2Q86UW7 1296 aa11.05□□□□□ -0.64
NPM1-205ENST00000518587 LHX8Q68G74 356 aa11.04□□□□□ -0.64
NPM1-205ENST00000518587 TOP2BQ02880 1626 aa11.02□□□□□ -0.64
NPM1-205ENST00000518587 BIVM-ERCC5R4GMW8 1640 aa11.02□□□□□ -0.64
NPM1-205ENST00000518587 ERICH3Q5RHP9 1530 aa11.01□□□□□ -0.65
NPM1-205ENST00000518587 SUPT5HO00267 1087 aaKnown RBP11.01□□□□□ -0.65
NPM1-205ENST00000518587 C3orf67Q6ZVT6 689 aa11□□□□□ -0.65
NPM1-205ENST00000518587 FHAD1B1AJZ9 1412 aa11□□□□□ -0.65
NPM1-205ENST00000518587 GRIN2AQ12879 1464 aa11□□□□□ -0.65
NPM1-205ENST00000518587 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.99□□□□□ -0.65
NPM1-205ENST00000518587 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
NPM1-205ENST00000518587 TMEM92Q6UXU6 159 aa10.98□□□□□ -0.65
NPM1-205ENST00000518587 MAMSTRQ6ZN01 415 aa10.98□□□□□ -0.65
NPM1-205ENST00000518587 NCKAP5LQ9HCH0 1330 aa10.97□□□□□ -0.65
NPM1-205ENST00000518587 NUP160Q12769 1436 aa10.97□□□□□ -0.65
NPM1-205ENST00000518587 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
NPM1-205ENST00000518587 SCUBE2Q9NQ36 999 aa10.96□□□□□ -0.65
NPM1-205ENST00000518587 CRISPLD2Q9H0B8 497 aa10.95□□□□□ -0.66
NPM1-205ENST00000518587 KIF3CO14782 793 aa10.94□□□□□ -0.66
NPM1-205ENST00000518587 PDE4AP27815 886 aa10.94□□□□□ -0.66
NPM1-205ENST00000518587 GPHNQ9NQX3 736 aaPredicted RBP10.93□□□□□ -0.66
NPM1-205ENST00000518587 SHROOM2Q13796 1616 aa10.92□□□□□ -0.66
NPM1-205ENST00000518587 C2orf72A6NCS6 295 aa10.92□□□□□ -0.66
NPM1-205ENST00000518587 KDM2AQ9Y2K7 1162 aa10.92□□□□□ -0.66
NPM1-205ENST00000518587 TMC2Q8TDI7 906 aa10.91□□□□□ -0.66
NPM1-205ENST00000518587 LARP6Q9BRS8 491 aaKnown RBP10.91□□□□□ -0.66
NPM1-205ENST00000518587 VSIG10Q8N0Z9 540 aa10.9□□□□□ -0.66
NPM1-205ENST00000518587 SLAIN1Q8ND83 568 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms