RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 PYGBP11216 843 aa10.77□□□□□ -0.69
MRPS28-203ENST00000518371 KLHL34Q8N239 644 aa10.77□□□□□ -0.69
MRPS28-203ENST00000518371 L3MBTL3Q96JM7 780 aaPredicted RBP10.77□□□□□ -0.69
MRPS28-203ENST00000518371 KIF21AQ7Z4S6 1674 aa10.76□□□□□ -0.69
MRPS28-203ENST00000518371 MRC2Q9UBG0 1479 aa10.75□□□□□ -0.69
MRPS28-203ENST00000518371 DCAF8Q5TAQ9 597 aa10.75□□□□□ -0.69
MRPS28-203ENST00000518371 IFNLR1Q8IU57 520 aaPredicted RBP10.75□□□□□ -0.69
MRPS28-203ENST00000518371 THOC2Q8NI27 1593 aaKnown RBP10.72□□□□□ -0.69
MRPS28-203ENST00000518371 MKRN3Q13064 507 aaKnown RBP10.69□□□□□ -0.7
MRPS28-203ENST00000518371 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
MRPS28-203ENST00000518371 WDR62O43379 1518 aa10.67□□□□□ -0.7
MRPS28-203ENST00000518371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.66□□□□□ -0.7
MRPS28-203ENST00000518371 URB2Q14146 1524 aaKnown RBP10.66□□□□□ -0.7
MRPS28-203ENST00000518371 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
MRPS28-203ENST00000518371 RNF166Q96A37 237 aaPredicted RBP10.63□□□□□ -0.71
MRPS28-203ENST00000518371 PRDM2Q13029 1718 aa10.62□□□□□ -0.71
MRPS28-203ENST00000518371 ABCC8Q09428 1581 aa10.62□□□□□ -0.71
MRPS28-203ENST00000518371 HOXB3P14651 431 aaPredicted RBP10.62□□□□□ -0.71
MRPS28-203ENST00000518371 GSE1Q14687 1217 aa10.62□□□□□ -0.71
MRPS28-203ENST00000518371 TOPBP1Q92547 1522 aa10.6□□□□□ -0.71
MRPS28-203ENST00000518371 ZNF467Q7Z7K2 595 aaPredicted RBP10.6□□□□□ -0.71
MRPS28-203ENST00000518371 HOXB1P14653 301 aaPredicted RBP10.59□□□□□ -0.71
MRPS28-203ENST00000518371 CHRM1P11229 460 aaPredicted RBP10.58□□□□□ -0.72
MRPS28-203ENST00000518371 ERBB3P21860 1342 aa10.58□□□□□ -0.72
MRPS28-203ENST00000518371 DPY19L2Q6NUT2 758 aa10.57□□□□□ -0.72
MRPS28-203ENST00000518371 ILDR1Q86SU0 546 aaPredicted RBP10.57□□□□□ -0.72
MRPS28-203ENST00000518371 DNMBPQ6XZF7 1577 aa10.56□□□□□ -0.72
MRPS28-203ENST00000518371 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
MRPS28-203ENST00000518371 DNAJC5Q9H3Z4 198 aa10.56□□□□□ -0.72
MRPS28-203ENST00000518371 CIZ1Q9ULV3 898 aaPredicted RBP10.56□□□□□ -0.72
MRPS28-203ENST00000518371 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
MRPS28-203ENST00000518371 MYT1LQ9UL68 1186 aa10.55□□□□□ -0.72
MRPS28-203ENST00000518371 PSEN1P49768 467 aa10.54□□□□□ -0.72
MRPS28-203ENST00000518371 SOGA1O94964 1423 aa10.53□□□□□ -0.72
MRPS28-203ENST00000518371 POLA1P09884 1462 aaPredicted RBP10.51□□□□□ -0.73
MRPS28-203ENST00000518371 DOK7Q18PE1 504 aa10.51□□□□□ -0.73
MRPS28-203ENST00000518371 BOLA1Q9Y3E2 137 aa10.51□□□□□ -0.73
MRPS28-203ENST00000518371 RAD54L2Q9Y4B4 1467 aa10.5□□□□□ -0.73
MRPS28-203ENST00000518371 CUX1P39880 1505 aa10.5□□□□□ -0.73
MRPS28-203ENST00000518371 ZNF608Q9ULD9 1512 aaPredicted RBP10.5□□□□□ -0.73
MRPS28-203ENST00000518371 G3V3G9 751 aa10.5□□□□□ -0.73
MRPS28-203ENST00000518371 FGD5Q6ZNL6 1462 aa10.49□□□□□ -0.73
MRPS28-203ENST00000518371 TDRD9Q8NDG6 1382 aaKnown RBP10.49□□□□□ -0.73
MRPS28-203ENST00000518371 WRNQ14191 1432 aaPredicted RBP eCLIP10.49□□□□□ -0.73
MRPS28-203ENST00000518371 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
MRPS28-203ENST00000518371 AQRO60306 1485 aaKnown RBP eCLIP10.48□□□□□ -0.73
MRPS28-203ENST00000518371 RIMBP2O15034 1052 aa10.44□□□□□ -0.74
MRPS28-203ENST00000518371 ZNF687Q8N1G0 1237 aa10.44□□□□□ -0.74
MRPS28-203ENST00000518371 TARBP1Q13395 1621 aaKnown RBP10.44□□□□□ -0.74
MRPS28-203ENST00000518371 PDAP1Q13442 181 aaKnown RBP10.42□□□□□ -0.74
MRPS28-203ENST00000518371 CABP2Q9NPB3 220 aa10.41□□□□□ -0.74
MRPS28-203ENST00000518371 PTGER2P43116 358 aa10.4□□□□□ -0.74
MRPS28-203ENST00000518371 TOP2BQ02880 1626 aa10.4□□□□□ -0.75
MRPS28-203ENST00000518371 SYNJ1O43426 1573 aa10.39□□□□□ -0.75
MRPS28-203ENST00000518371 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
MRPS28-203ENST00000518371 CHMP7Q8WUX9 453 aaPredicted RBP10.39□□□□□ -0.75
MRPS28-203ENST00000518371 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
MRPS28-203ENST00000518371 TRIM41Q8WV44 630 aa10.38□□□□□ -0.75
MRPS28-203ENST00000518371 GRIN2BQ13224 1484 aa10.37□□□□□ -0.75
MRPS28-203ENST00000518371 GAPVD1Q14C86 1478 aa10.37□□□□□ -0.75
MRPS28-203ENST00000518371 BIVM-ERCC5R4GMW8 1640 aa10.36□□□□□ -0.75
MRPS28-203ENST00000518371 RNF25Q96BH1 459 aaPredicted RBP10.36□□□□□ -0.75
MRPS28-203ENST00000518371 ZSWIM6Q9HCJ5 1215 aa10.36□□□□□ -0.75
MRPS28-203ENST00000518371 WDR97A6NE52 1622 aa10.34□□□□□ -0.75
MRPS28-203ENST00000518371 SNAPC4Q5SXM2 1469 aa10.34□□□□□ -0.75
MRPS28-203ENST00000518371 GPR153Q6NV75 609 aa10.33□□□□□ -0.76
MRPS28-203ENST00000518371 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
MRPS28-203ENST00000518371 ANKRD13DQ6ZTN6 518 aa10.32□□□□□ -0.76
MRPS28-203ENST00000518371 SYNJ2O15056 1496 aa10.29□□□□□ -0.76
MRPS28-203ENST00000518371 KIF27Q86VH2 1401 aa10.28□□□□□ -0.76
MRPS28-203ENST00000518371 TMEM92Q6UXU6 159 aa10.28□□□□□ -0.76
MRPS28-203ENST00000518371 ABCA5Q8WWZ7 1642 aa10.28□□□□□ -0.76
MRPS28-203ENST00000518371 FHAD1B1AJZ9 1412 aa10.26□□□□□ -0.77
MRPS28-203ENST00000518371 RIOK3O14730 519 aaKnown RBP10.26□□□□□ -0.77
MRPS28-203ENST00000518371 IGF1RP08069 1367 aa10.26□□□□□ -0.77
MRPS28-203ENST00000518371 CHD1O14646 1710 aa10.25□□□□□ -0.77
MRPS28-203ENST00000518371 PBRM1Q86U86 1689 aa10.25□□□□□ -0.77
MRPS28-203ENST00000518371 ERICH3Q5RHP9 1530 aa10.24□□□□□ -0.77
MRPS28-203ENST00000518371 EFCAB3Q8N7B9 438 aa10.24□□□□□ -0.77
MRPS28-203ENST00000518371 PLA2G2EQ9NZK7 142 aa10.24□□□□□ -0.77
MRPS28-203ENST00000518371 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.23□□□□□ -0.77
MRPS28-203ENST00000518371 LSM11P83369 360 aaKnown RBP eCLIP10.23□□□□□ -0.77
MRPS28-203ENST00000518371 ARSIQ5FYB1 569 aa10.23□□□□□ -0.77
MRPS28-203ENST00000518371 MICALL2Q8IY33 904 aa10.23□□□□□ -0.77
MRPS28-203ENST00000518371 ZFP91Q96JP5 570 aaPredicted RBP10.23□□□□□ -0.77
MRPS28-203ENST00000518371 PKD2Q13563 968 aa10.22□□□□□ -0.77
MRPS28-203ENST00000518371 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
MRPS28-203ENST00000518371 CYB5RLQ6IPT4 315 aa10.21□□□□□ -0.77
MRPS28-203ENST00000518371 ZNF316A6NFI3 1004 aaPredicted RBP10.2□□□□□ -0.78
MRPS28-203ENST00000518371 VGFO15240 615 aaPredicted RBP10.2□□□□□ -0.78
MRPS28-203ENST00000518371 ADAMTS12P58397 1594 aa10.2□□□□□ -0.78
MRPS28-203ENST00000518371 CARMIL1Q5VZK9 1371 aa10.2□□□□□ -0.78
MRPS28-203ENST00000518371 ARHGEF11O15085 1522 aa10.18□□□□□ -0.78
MRPS28-203ENST00000518371 ECM2O94769 699 aaPredicted RBP10.18□□□□□ -0.78
MRPS28-203ENST00000518371 RUSC2Q8N2Y8 1516 aa10.17□□□□□ -0.78
MRPS28-203ENST00000518371 NUP160Q12769 1436 aa10.16□□□□□ -0.78
MRPS28-203ENST00000518371 KHSRPQ92945 711 aaKnown RBP eCLIP10.16□□□□□ -0.784e-8■■■□□ 15.6
MRPS28-203ENST00000518371 JPH4Q96JJ6 628 aa10.16□□□□□ -0.78
MRPS28-203ENST00000518371 HCSTQ9UBK5 93 aa10.16□□□□□ -0.78
MRPS28-203ENST00000518371 CLASP1Q7Z460 1538 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms