RNA–Protein interactions for RNA: ENST00000517813.1

DENND3-203, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 4,487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-203ENST00000517813 PRKRIP1Q9H875 184 aaPredicted RBP17.12■□□□□ 0.33
DENND3-203ENST00000517813 RALBP1Q15311 655 aa17.11■□□□□ 0.33
DENND3-203ENST00000517813 EFCAB2Q5VUJ9 269 aa17.11■□□□□ 0.33
DENND3-203ENST00000517813 UACAQ9BZF9 1416 aa17.11■□□□□ 0.33
DENND3-203ENST00000517813 RGS3P49796 1198 aa17.1■□□□□ 0.33
DENND3-203ENST00000517813 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
DENND3-203ENST00000517813 KANK1Q14678 1352 aa17.1■□□□□ 0.33
DENND3-203ENST00000517813 BICRAQ9NZM4 1560 aa17.09■□□□□ 0.33
DENND3-203ENST00000517813 NUDCQ9Y266 331 aa17.08■□□□□ 0.32
DENND3-203ENST00000517813 ZNF644Q9H582 1327 aaPredicted RBP17.08■□□□□ 0.32
DENND3-203ENST00000517813 ST20-MTHFSA0A0A6YYL1 179 aa17.08■□□□□ 0.32
DENND3-203ENST00000517813 HMGXB3Q12766 1538 aa17.07■□□□□ 0.32
DENND3-203ENST00000517813 FRAT1Q92837 279 aaPredicted RBP17.07■□□□□ 0.32
DENND3-203ENST00000517813 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
DENND3-203ENST00000517813 RSPH4AQ5TD94 716 aa17.06■□□□□ 0.32
DENND3-203ENST00000517813 RCAN3Q9UKA8 241 aa17.06■□□□□ 0.32
DENND3-203ENST00000517813 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
DENND3-203ENST00000517813 NLRP13Q86W25 1043 aa17.04■□□□□ 0.32
DENND3-203ENST00000517813 ARXQ96QS3 562 aa17.04■□□□□ 0.32
DENND3-203ENST00000517813 LAS1LQ9Y4W2 734 aaKnown RBP17.04■□□□□ 0.32
DENND3-203ENST00000517813 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
DENND3-203ENST00000517813 POGKQ9P215 609 aa17.03■□□□□ 0.32
DENND3-203ENST00000517813 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.32
DENND3-203ENST00000517813 GGT6Q6P531 493 aa17.03■□□□□ 0.32
DENND3-203ENST00000517813 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
DENND3-203ENST00000517813 BECN1Q14457 450 aa17.02■□□□□ 0.32
DENND3-203ENST00000517813 NESP48681 1621 aa17.02■□□□□ 0.31
DENND3-203ENST00000517813 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.31
DENND3-203ENST00000517813 MYH16Q9H6N6 1097 aa17.01■□□□□ 0.31
DENND3-203ENST00000517813 USP47Q96K76 1375 aa17.01■□□□□ 0.31
DENND3-203ENST00000517813 U2SURPO15042 1029 aaKnown RBP17■□□□□ 0.31
DENND3-203ENST00000517813 MORC1Q86VD1 984 aa16.99■□□□□ 0.31
DENND3-203ENST00000517813 TIAM1Q13009 1591 aa16.99■□□□□ 0.31
DENND3-203ENST00000517813 KIF3BO15066 747 aa16.99■□□□□ 0.31
DENND3-203ENST00000517813 POLA1P09884 1462 aaPredicted RBP16.98■□□□□ 0.31
DENND3-203ENST00000517813 SAFB2Q14151 953 aaKnown RBP eCLIP16.98■□□□□ 0.31
DENND3-203ENST00000517813 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
DENND3-203ENST00000517813 EIF5BO60841 1220 aaKnown RBP16.97■□□□□ 0.31
DENND3-203ENST00000517813 KIF15Q9NS87 1388 aa16.97■□□□□ 0.31
DENND3-203ENST00000517813 SPAG9O60271 1321 aaKnown RBP16.97■□□□□ 0.31
DENND3-203ENST00000517813 CCDC144AA2RUR9 1427 aa16.97■□□□□ 0.31
DENND3-203ENST00000517813 ANP32BQ92688 251 aaKnown RBP16.96■□□□□ 0.31
DENND3-203ENST00000517813 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
DENND3-203ENST00000517813 PTPRGP23470 1445 aa16.96■□□□□ 0.31
DENND3-203ENST00000517813 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.31
DENND3-203ENST00000517813 CCDC7Q96M83 1385 aa16.96■□□□□ 0.3
DENND3-203ENST00000517813 KIF7Q2M1P5 1343 aa16.95■□□□□ 0.3
DENND3-203ENST00000517813 MYBBP1AQ9BQG0 1328 aaKnown RBP16.94■□□□□ 0.3
DENND3-203ENST00000517813 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
DENND3-203ENST00000517813 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
DENND3-203ENST00000517813 PDE3BQ13370 1112 aa16.92■□□□□ 0.3
DENND3-203ENST00000517813 PEG3Q9GZU2 1588 aa16.92■□□□□ 0.3
DENND3-203ENST00000517813 PANK3Q9H999 370 aa16.91■□□□□ 0.3
DENND3-203ENST00000517813 HFM1A2PYH4 1435 aa16.9■□□□□ 0.3
DENND3-203ENST00000517813 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
DENND3-203ENST00000517813 STK26Q9P289 416 aa16.9■□□□□ 0.3
DENND3-203ENST00000517813 ARID4BQ4LE39 1312 aaPredicted RBP16.89■□□□□ 0.29
DENND3-203ENST00000517813 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
DENND3-203ENST00000517813 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
DENND3-203ENST00000517813 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
DENND3-203ENST00000517813 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
DENND3-203ENST00000517813 C14orf37Q86TY3 774 aa16.88■□□□□ 0.29
DENND3-203ENST00000517813 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
DENND3-203ENST00000517813 MS4A1P11836 297 aa16.87■□□□□ 0.29
DENND3-203ENST00000517813 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
DENND3-203ENST00000517813 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
DENND3-203ENST00000517813 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
DENND3-203ENST00000517813 CCDC146Q8IYE0 955 aa16.86■□□□□ 0.29
DENND3-203ENST00000517813 U2AF1L5P0DN76 240 aaPredicted RBP16.85■□□□□ 0.29
DENND3-203ENST00000517813 U2AF1Q01081 240 aaKnown RBP eCLIP16.85■□□□□ 0.29
DENND3-203ENST00000517813 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
DENND3-203ENST00000517813 MLECQ14165 292 aa16.84■□□□□ 0.29
DENND3-203ENST00000517813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.83■□□□□ 0.29
DENND3-203ENST00000517813 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.29
DENND3-203ENST00000517813 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
DENND3-203ENST00000517813 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
DENND3-203ENST00000517813 DEKP35659 375 aaKnown RBP16.83■□□□□ 0.28
DENND3-203ENST00000517813 EHBP1L1Q8N3D4 1523 aa16.82■□□□□ 0.28
DENND3-203ENST00000517813 PNNQ9H307 717 aaKnown RBP16.82■□□□□ 0.28
DENND3-203ENST00000517813 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
DENND3-203ENST00000517813 UNC13AQ9UPW8 1703 aa16.81■□□□□ 0.28
DENND3-203ENST00000517813 NAIPQ13075 1403 aa16.8■□□□□ 0.28
DENND3-203ENST00000517813 MIA2Q96PC5 1412 aa16.8■□□□□ 0.28
DENND3-203ENST00000517813 EXOC6Q8TAG9 804 aa16.8■□□□□ 0.28
DENND3-203ENST00000517813 TRAK1Q9UPV9 953 aa16.8■□□□□ 0.28
DENND3-203ENST00000517813 PLIN1O60240 522 aa16.8■□□□□ 0.28
DENND3-203ENST00000517813 IPO9Q96P70 1041 aaKnown RBP16.8■□□□□ 0.28
DENND3-203ENST00000517813 RRP1P56182 461 aaKnown RBP16.79■□□□□ 0.28
DENND3-203ENST00000517813 PCF11O94913 1555 aaKnown RBP16.79■□□□□ 0.28
DENND3-203ENST00000517813 NUTM2DQ5VT03 806 aaPredicted RBP16.79■□□□□ 0.28
DENND3-203ENST00000517813 WASHC2CQ9Y4E1 1318 aa16.78■□□□□ 0.28
DENND3-203ENST00000517813 CHMP4BQ9H444 224 aaKnown RBP16.77■□□□□ 0.28
DENND3-203ENST00000517813 HDGFL2Q7Z4V5 671 aaPredicted RBP16.77■□□□□ 0.27
DENND3-203ENST00000517813 MAP3K1Q13233 1512 aa16.76■□□□□ 0.27
DENND3-203ENST00000517813 PRG4Q92954 1404 aaPredicted RBP16.75■□□□□ 0.27
DENND3-203ENST00000517813 BIVM-ERCC5R4GMW8 1640 aa16.75■□□□□ 0.27
DENND3-203ENST00000517813 GOLGA6L22H0YM25 854 aa16.74■□□□□ 0.27
DENND3-203ENST00000517813 SOX12O15370 315 aa16.74■□□□□ 0.27
DENND3-203ENST00000517813 CLUAP1Q96AJ1 413 aa16.74■□□□□ 0.27
DENND3-203ENST00000517813 CCDC184Q52MB2 194 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms