RNA–Protein interactions for RNA: ENST00000517813.1

DENND3-203, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 4,487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-203ENST00000517813 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
DENND3-203ENST00000517813 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
DENND3-203ENST00000517813 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
DENND3-203ENST00000517813 SHROOM4Q9ULL8 1493 aa22.11■■□□□ 1.13
DENND3-203ENST00000517813 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
DENND3-203ENST00000517813 PCGF6Q9BYE7 350 aa20.85■□□□□ 0.93
DENND3-203ENST00000517813 FAM9AQ8IZU1 332 aaPredicted RBP20.83■□□□□ 0.93
DENND3-203ENST00000517813 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
DENND3-203ENST00000517813 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
DENND3-203ENST00000517813 TTBK1Q5TCY1 1321 aaPredicted RBP20.39■□□□□ 0.85
DENND3-203ENST00000517813 APLP2Q06481 763 aa20.35■□□□□ 0.85
DENND3-203ENST00000517813 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
DENND3-203ENST00000517813 ZEB1P37275 1124 aaPredicted RBP20.21■□□□□ 0.83
DENND3-203ENST00000517813 HRCP23327 699 aa20.12■□□□□ 0.81
DENND3-203ENST00000517813 CCER1Q8TC90 406 aaPredicted RBP20.1■□□□□ 0.81
DENND3-203ENST00000517813 RANGAP1P46060 587 aaPredicted RBP20.09■□□□□ 0.81
DENND3-203ENST00000517813 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
DENND3-203ENST00000517813 UBTFP17480 764 aaKnown RBP20.08■□□□□ 0.81
DENND3-203ENST00000517813 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
DENND3-203ENST00000517813 ZCCHC6Q5VYS8 1495 aaKnown RBP19.8■□□□□ 0.76
DENND3-203ENST00000517813 CENPBP07199 599 aaPredicted RBP19.78■□□□□ 0.76
DENND3-203ENST00000517813 ABCC9O60706 1549 aa19.78■□□□□ 0.76
DENND3-203ENST00000517813 PELP1Q8IZL8 1130 aaKnown RBP19.75■□□□□ 0.75
DENND3-203ENST00000517813 ATP1B4Q9UN42 357 aaPredicted RBP19.68■□□□□ 0.74
DENND3-203ENST00000517813 CCDC180Q9P1Z9 1646 aa19.52■□□□□ 0.71
DENND3-203ENST00000517813 YTHDC1Q96MU7 727 aaKnown RBP19.51■□□□□ 0.71
DENND3-203ENST00000517813 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
DENND3-203ENST00000517813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.48■□□□□ 0.71
DENND3-203ENST00000517813 HNRNPUL2Q1KMD3 747 aaKnown RBP19.47■□□□□ 0.71
DENND3-203ENST00000517813 ITGAEP38570 1179 aa19.36■□□□□ 0.69
DENND3-203ENST00000517813 SCRIBQ14160 1630 aa19.34■□□□□ 0.69
DENND3-203ENST00000517813 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
DENND3-203ENST00000517813 DIEXFQ68CQ4 756 aaKnown RBP19.21■□□□□ 0.67
DENND3-203ENST00000517813 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
DENND3-203ENST00000517813 CSRNP3Q8WYN3 585 aa19.15■□□□□ 0.66
DENND3-203ENST00000517813 NEFLP07196 543 aa19.08■□□□□ 0.65
DENND3-203ENST00000517813 RSF1Q96T23 1441 aaPredicted RBP19.04■□□□□ 0.64
DENND3-203ENST00000517813 FAM50AQ14320 339 aaKnown RBP18.93■□□□□ 0.62
DENND3-203ENST00000517813 ERICH6Q7L0X2 663 aa18.89■□□□□ 0.61
DENND3-203ENST00000517813 ZNF316A6NFI3 1004 aaPredicted RBP18.87■□□□□ 0.61
DENND3-203ENST00000517813 GTF3C3Q9Y5Q9 886 aa18.81■□□□□ 0.6
DENND3-203ENST00000517813 NEUROD1Q13562 356 aa18.78■□□□□ 0.6
DENND3-203ENST00000517813 POLR3GLQ9BT43 218 aa18.77■□□□□ 0.59
DENND3-203ENST00000517813 NACADO15069 1562 aa18.73■□□□□ 0.59
DENND3-203ENST00000517813 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
DENND3-203ENST00000517813 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
DENND3-203ENST00000517813 ACIN1Q9UKV3 1341 aaKnown RBP18.71■□□□□ 0.59
DENND3-203ENST00000517813 MYT1Q01538 1121 aa18.69■□□□□ 0.58
DENND3-203ENST00000517813 CNGB1Q14028 1251 aaPredicted RBP18.68■□□□□ 0.58
DENND3-203ENST00000517813 CECR2Q9BXF3 1484 aa18.68■□□□□ 0.58
DENND3-203ENST00000517813 TRIM52Q96A61 297 aa18.65■□□□□ 0.58
DENND3-203ENST00000517813 CEP162Q5TB80 1403 aa18.58■□□□□ 0.56
DENND3-203ENST00000517813 CLIP1P30622 1438 aa18.55■□□□□ 0.56
DENND3-203ENST00000517813 EEA1Q15075 1411 aa18.55■□□□□ 0.56
DENND3-203ENST00000517813 MYT1LQ9UL68 1186 aa18.52■□□□□ 0.56
DENND3-203ENST00000517813 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
DENND3-203ENST00000517813 WRNQ14191 1432 aaPredicted RBP eCLIP18.51■□□□□ 0.55
DENND3-203ENST00000517813 ANP32CO43423 234 aa18.5■□□□□ 0.55
DENND3-203ENST00000517813 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
DENND3-203ENST00000517813 BCANQ96GW7 911 aa18.47■□□□□ 0.55
DENND3-203ENST00000517813 MROH2BQ7Z745 1585 aa18.46■□□□□ 0.55
DENND3-203ENST00000517813 ARID3CA6NKF2 412 aa18.46■□□□□ 0.55
DENND3-203ENST00000517813 TNIKQ9UKE5 1360 aa18.46■□□□□ 0.55
DENND3-203ENST00000517813 FBLN2P98095 1184 aa18.41■□□□□ 0.54
DENND3-203ENST00000517813 ZNF326Q5BKZ1 582 aaKnown RBP18.38■□□□□ 0.53
DENND3-203ENST00000517813 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
DENND3-203ENST00000517813 BAZ1BQ9UIG0 1483 aaKnown RBP18.37■□□□□ 0.53
DENND3-203ENST00000517813 SOGA1O94964 1423 aa18.35■□□□□ 0.53
DENND3-203ENST00000517813 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
DENND3-203ENST00000517813 MIER1Q8N108 512 aa18.33■□□□□ 0.52
DENND3-203ENST00000517813 DDX10Q13206 875 aaKnown RBP18.29■□□□□ 0.52
DENND3-203ENST00000517813 TONSLQ96HA7 1378 aa18.28■□□□□ 0.52
DENND3-203ENST00000517813 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.52
DENND3-203ENST00000517813 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
DENND3-203ENST00000517813 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
DENND3-203ENST00000517813 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
DENND3-203ENST00000517813 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
DENND3-203ENST00000517813 WIZO95785 1651 aa18.21■□□□□ 0.51
DENND3-203ENST00000517813 CHIC2Q9UKJ5 165 aa18.19■□□□□ 0.5
DENND3-203ENST00000517813 MTUS2Q5JR59 1369 aa18.18■□□□□ 0.5
DENND3-203ENST00000517813 DAXXQ9UER7 740 aaPredicted RBP18.16■□□□□ 0.5
DENND3-203ENST00000517813 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
DENND3-203ENST00000517813 CLSPNQ9HAW4 1339 aa18.14■□□□□ 0.49
DENND3-203ENST00000517813 FKBP8Q14318 412 aa18.12■□□□□ 0.49
DENND3-203ENST00000517813 HIRIP3Q9BW71 556 aaPredicted RBP18.12■□□□□ 0.49
DENND3-203ENST00000517813 HNRNPUQ00839 825 aaKnown RBP eCLIP18.08■□□□□ 0.48
DENND3-203ENST00000517813 TOP2AP11388 1531 aaKnown RBP18.08■□□□□ 0.48
DENND3-203ENST00000517813 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
DENND3-203ENST00000517813 RRP7BPQ9NSQ0 103 aa18.02■□□□□ 0.47
DENND3-203ENST00000517813 FAM9BQ8IZU0 186 aa17.99■□□□□ 0.47
DENND3-203ENST00000517813 CCNB3Q8WWL7 1395 aa17.98■□□□□ 0.47
DENND3-203ENST00000517813 RTL5Q5HYW3 569 aaPredicted RBP17.96■□□□□ 0.47
DENND3-203ENST00000517813 CUX2O14529 1486 aa17.96■□□□□ 0.47
DENND3-203ENST00000517813 KANK4Q5T7N3 995 aaPredicted RBP17.96■□□□□ 0.47
DENND3-203ENST00000517813 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.46
DENND3-203ENST00000517813 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
DENND3-203ENST00000517813 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
DENND3-203ENST00000517813 RUSC2Q8N2Y8 1516 aa17.91■□□□□ 0.46
DENND3-203ENST00000517813 SMARCA4P51532 1647 aa17.91■□□□□ 0.46
DENND3-203ENST00000517813 CHMP7Q8WUX9 453 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms