RNA–Protein interactions for RNA: ENST00000514393.5

ATR-207, Transcript of ATR serine/threonine kinase, humanhuman

TSL 4

Gene ATR, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-207ENST00000514393 G3V3G9 751 aa9.72□□□□□ -0.85
ATR-207ENST00000514393 PDAP1Q13442 181 aaKnown RBP9.72□□□□□ -0.85
ATR-207ENST00000514393 HMGXB3Q12766 1538 aa9.71□□□□□ -0.86
ATR-207ENST00000514393 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
ATR-207ENST00000514393 KRTAP3-2Q9BYR7 98 aa9.69□□□□□ -0.86
ATR-207ENST00000514393 TRIM26Q12899 539 aaPredicted RBP9.67□□□□□ -0.86
ATR-207ENST00000514393 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
ATR-207ENST00000514393 WRNQ14191 1432 aaPredicted RBP eCLIP9.66□□□□□ -0.86
ATR-207ENST00000514393 POTEB3A0JP26 581 aa9.66□□□□□ -0.86
ATR-207ENST00000514393 POTEBQ6S5H4 581 aa9.66□□□□□ -0.86
ATR-207ENST00000514393 FAM9AQ8IZU1 332 aaPredicted RBP9.64□□□□□ -0.87
ATR-207ENST00000514393 DPY19L2Q6NUT2 758 aa9.63□□□□□ -0.87
ATR-207ENST00000514393 ZNF710Q8N1W2 664 aa9.63□□□□□ -0.87
ATR-207ENST00000514393 CABP2Q9NPB3 220 aa9.63□□□□□ -0.87
ATR-207ENST00000514393 HOXB1P14653 301 aaPredicted RBP9.62□□□□□ -0.87
ATR-207ENST00000514393 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
ATR-207ENST00000514393 HOXB3P14651 431 aaPredicted RBP9.61□□□□□ -0.87
ATR-207ENST00000514393 SPOCK2Q92563 424 aa9.61□□□□□ -0.87
ATR-207ENST00000514393 PCGF6Q9BYE7 350 aa9.6□□□□□ -0.87
ATR-207ENST00000514393 TNIKQ9UKE5 1360 aa9.6□□□□□ -0.87
ATR-207ENST00000514393 RIMBP2O15034 1052 aa9.59□□□□□ -0.87
ATR-207ENST00000514393 CIZ1Q9ULV3 898 aaPredicted RBP9.59□□□□□ -0.87
ATR-207ENST00000514393 ABCC8Q09428 1581 aa9.58□□□□□ -0.88
ATR-207ENST00000514393 CFTRP13569 1480 aa9.58□□□□□ -0.88
ATR-207ENST00000514393 ERBB3P21860 1342 aa9.57□□□□□ -0.88
ATR-207ENST00000514393 HRCP23327 699 aa9.57□□□□□ -0.88
ATR-207ENST00000514393 SOGA1O94964 1423 aa9.55□□□□□ -0.88
ATR-207ENST00000514393 CADPSQ9ULU8 1353 aa9.52□□□□□ -0.88
ATR-207ENST00000514393 ZSWIM6Q9HCJ5 1215 aa9.52□□□□□ -0.89
ATR-207ENST00000514393 GOLGA3Q08378 1498 aa9.52□□□□□ -0.89
ATR-207ENST00000514393 CEP164Q9UPV0 1460 aa9.52□□□□□ -0.89
ATR-207ENST00000514393 IFNLR1Q8IU57 520 aaPredicted RBP9.51□□□□□ -0.89
ATR-207ENST00000514393 TOP2BQ02880 1626 aa9.51□□□□□ -0.89
ATR-207ENST00000514393 ZEB1P37275 1124 aaPredicted RBP9.5□□□□□ -0.89
ATR-207ENST00000514393 RNF166Q96A37 237 aaPredicted RBP9.5□□□□□ -0.89
ATR-207ENST00000514393 UBTFP17480 764 aaKnown RBP9.49□□□□□ -0.89
ATR-207ENST00000514393 EFCAB3Q8N7B9 438 aa9.48□□□□□ -0.89
ATR-207ENST00000514393 SYNJ1O43426 1573 aa9.48□□□□□ -0.89
ATR-207ENST00000514393 VARS2Q5ST30 1063 aaKnown RBP9.47□□□□□ -0.89
ATR-207ENST00000514393 KIF21BO75037 1637 aa9.46□□□□□ -0.89
ATR-207ENST00000514393 BIVM-ERCC5R4GMW8 1640 aa9.46□□□□□ -0.89
ATR-207ENST00000514393 PTGER2P43116 358 aa9.46□□□□□ -0.9
ATR-207ENST00000514393 ZNF687Q8N1G0 1237 aa9.46□□□□□ -0.9
ATR-207ENST00000514393 CEP162Q5TB80 1403 aa9.46□□□□□ -0.9
ATR-207ENST00000514393 SOX12O15370 315 aa9.45□□□□□ -0.9
ATR-207ENST00000514393 MYT1LQ9UL68 1186 aa9.45□□□□□ -0.9
ATR-207ENST00000514393 RUSC2Q8N2Y8 1516 aa9.45□□□□□ -0.9
ATR-207ENST00000514393 MICALL2Q8IY33 904 aa9.44□□□□□ -0.9
ATR-207ENST00000514393 KIF27Q86VH2 1401 aa9.44□□□□□ -0.9
ATR-207ENST00000514393 CC2D2AQ9P2K1 1620 aa9.44□□□□□ -0.9
ATR-207ENST00000514393 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
ATR-207ENST00000514393 GPR153Q6NV75 609 aa9.41□□□□□ -0.9
ATR-207ENST00000514393 PRXQ9BXM0 1461 aa9.4□□□□□ -0.9
ATR-207ENST00000514393 CUX1P39880 1505 aa9.4□□□□□ -0.91
ATR-207ENST00000514393 TMEM92Q6UXU6 159 aa9.38□□□□□ -0.91
ATR-207ENST00000514393 PRDM2Q13029 1718 aa9.37□□□□□ -0.91
ATR-207ENST00000514393 CLIP1P30622 1438 aa9.37□□□□□ -0.91
ATR-207ENST00000514393 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
ATR-207ENST00000514393 VGFO15240 615 aaPredicted RBP9.34□□□□□ -0.91
ATR-207ENST00000514393 IGF1RP08069 1367 aa9.34□□□□□ -0.91
ATR-207ENST00000514393 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
ATR-207ENST00000514393 RAPGEF2Q9Y4G8 1499 aa9.34□□□□□ -0.91
ATR-207ENST00000514393 VPS8Q8N3P4 1428 aa9.33□□□□□ -0.92
ATR-207ENST00000514393 LAMC3Q9Y6N6 1575 aa9.33□□□□□ -0.92
ATR-207ENST00000514393 PDS5BQ9NTI5 1447 aa9.32□□□□□ -0.92
ATR-207ENST00000514393 MS4A4AQ96JQ5 239 aa9.32□□□□□ -0.92
ATR-207ENST00000514393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.31□□□□□ -0.92
ATR-207ENST00000514393 ZNF316A6NFI3 1004 aaPredicted RBP9.31□□□□□ -0.92
ATR-207ENST00000514393 ARSIQ5FYB1 569 aa9.31□□□□□ -0.92
ATR-207ENST00000514393 ANKRD13DQ6ZTN6 518 aa9.31□□□□□ -0.92
ATR-207ENST00000514393 ZFP91Q96JP5 570 aaPredicted RBP9.31□□□□□ -0.92
ATR-207ENST00000514393 PHF8Q9UPP1 1060 aa9.31□□□□□ -0.92
ATR-207ENST00000514393 CARMIL1Q5VZK9 1371 aa9.29□□□□□ -0.92
ATR-207ENST00000514393 NLRP6P59044 892 aa9.29□□□□□ -0.92
ATR-207ENST00000514393 TAOK2Q9UL54 1235 aa9.29□□□□□ -0.92
ATR-207ENST00000514393 DNMBPQ6XZF7 1577 aa9.29□□□□□ -0.92
ATR-207ENST00000514393 CUX2O14529 1486 aa9.28□□□□□ -0.92
ATR-207ENST00000514393 FGD5Q6ZNL6 1462 aa9.28□□□□□ -0.92
ATR-207ENST00000514393 ABCA10Q8WWZ4 1543 aa9.27□□□□□ -0.93
ATR-207ENST00000514393 PBX2P40425 430 aa9.26□□□□□ -0.93
ATR-207ENST00000514393 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
ATR-207ENST00000514393 RNF25Q96BH1 459 aaPredicted RBP9.25□□□□□ -0.93
ATR-207ENST00000514393 TOPBP1Q92547 1522 aa9.25□□□□□ -0.93
ATR-207ENST00000514393 RTN4Q9NQC3 1192 aaKnown RBP9.23□□□□□ -0.93
ATR-207ENST00000514393 POLA1P09884 1462 aaPredicted RBP9.21□□□□□ -0.93
ATR-207ENST00000514393 MAP3K1Q13233 1512 aa9.21□□□□□ -0.93
ATR-207ENST00000514393 KHSRPQ92945 711 aaKnown RBP eCLIP9.21□□□□□ -0.94
ATR-207ENST00000514393 PPARGC1BQ86YN6 1023 aaKnown RBP9.2□□□□□ -0.94
ATR-207ENST00000514393 FBXO22Q8NEZ5 403 aa9.2□□□□□ -0.94
ATR-207ENST00000514393 AMER1Q5JTC6 1135 aaPredicted RBP9.19□□□□□ -0.94
ATR-207ENST00000514393 FHAD1B1AJZ9 1412 aa9.18□□□□□ -0.94
ATR-207ENST00000514393 KIF3CO14782 793 aa9.18□□□□□ -0.94
ATR-207ENST00000514393 SLC34A2O95436 690 aa9.18□□□□□ -0.94
ATR-207ENST00000514393 NESP48681 1621 aa9.18□□□□□ -0.94
ATR-207ENST00000514393 CCER1Q8TC90 406 aaPredicted RBP9.18□□□□□ -0.94
ATR-207ENST00000514393 ARAP1Q96P48 1450 aa9.17□□□□□ -0.94
ATR-207ENST00000514393 ARHGAP35Q9NRY4 1499 aa9.17□□□□□ -0.94
ATR-207ENST00000514393 BCL11BQ9C0K0 894 aaPredicted RBP9.17□□□□□ -0.94
ATR-207ENST00000514393 HCSTQ9UBK5 93 aa9.17□□□□□ -0.94
ATR-207ENST00000514393 URB2Q14146 1524 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms